RNA–Protein interactions for RNA: ENST00000549940.5

GNPTAB-206, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best) BASIC

Gene GNPTAB, Length 1,678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-206ENST00000549940 SRSF9Q13242 221 aaKnown RBP eCLIP18.37■□□□□ 0.53
GNPTAB-206ENST00000549940 C15orf56Q8N910 161 aa18.37■□□□□ 0.53
GNPTAB-206ENST00000549940 HIGD2BQ4VC39 106 aa18.36■□□□□ 0.53
GNPTAB-206ENST00000549940 C2orf82Q6UX34 121 aa18.36■□□□□ 0.53
GNPTAB-206ENST00000549940 LINC00476Q8WZB0 136 aa18.36■□□□□ 0.53
GNPTAB-206ENST00000549940 TIMM17BO60830 172 aa18.34■□□□□ 0.53
GNPTAB-206ENST00000549940 TAL2Q16559 108 aa18.34■□□□□ 0.53
GNPTAB-206ENST00000549940 LINC00526Q96FQ7 95 aa18.34■□□□□ 0.53
GNPTAB-206ENST00000549940 SPANXB1Q9NS25 103 aaPredicted RBP18.34■□□□□ 0.53
GNPTAB-206ENST00000549940 C6orf223Q8N319 242 aa18.33■□□□□ 0.52
GNPTAB-206ENST00000549940 HINT1P49773 126 aaPredicted RBP18.32■□□□□ 0.52
GNPTAB-206ENST00000549940 GVQW2A0A096LPI5 108 aaPredicted RBP18.31■□□□□ 0.52
GNPTAB-206ENST00000549940 USP17L23D6RBM5 183 aa18.31■□□□□ 0.52
GNPTAB-206ENST00000549940 M0R143 59 aa18.31■□□□□ 0.52
GNPTAB-206ENST00000549940 NTN5Q8WTR8 489 aaPredicted RBP18.31■□□□□ 0.52
GNPTAB-206ENST00000549940 C2orf48Q96LS8 159 aa18.29■□□□□ 0.52
GNPTAB-206ENST00000549940 LITAFQ99732 161 aa18.29■□□□□ 0.52
GNPTAB-206ENST00000549940 A0A0U1RRA0 63 aa18.28■□□□□ 0.52
GNPTAB-206ENST00000549940 SMIM13P0DJ93 91 aa18.28■□□□□ 0.52
GNPTAB-206ENST00000549940 GCSHP23434 173 aa18.28■□□□□ 0.52
GNPTAB-206ENST00000549940 BATFQ16520 125 aa18.28■□□□□ 0.52
GNPTAB-206ENST00000549940 CAMK2N2Q96S95 79 aa18.28■□□□□ 0.52
GNPTAB-206ENST00000549940 UNQ6190/PRO20217Q6UXQ8 127 aa18.28■□□□□ 0.52
GNPTAB-206ENST00000549940 Q6ZVH6 145 aa18.28■□□□□ 0.52
GNPTAB-206ENST00000549940 CEND1Q8N111 149 aa18.28■□□□□ 0.52
GNPTAB-206ENST00000549940 ERG28Q9UKR5 140 aa18.28■□□□□ 0.52
GNPTAB-206ENST00000549940 F8WDY8 70 aa18.27■□□□□ 0.52
GNPTAB-206ENST00000549940 ADAMTSL4-AS1Q5T5F5 129 aa18.27■□□□□ 0.52
GNPTAB-206ENST00000549940 Q6ZR54 194 aa18.27■□□□□ 0.52
GNPTAB-206ENST00000549940 ALMS1Q8TCU4 4167 aa18.27■□□□□ 0.51
GNPTAB-206ENST00000549940 LINC00158P58513 81 aa18.26■□□□□ 0.51
GNPTAB-206ENST00000549940 SPANXDQ9BXN6 97 aa18.26■□□□□ 0.51
GNPTAB-206ENST00000549940 SPANXCQ9NY87 97 aa18.26■□□□□ 0.51
GNPTAB-206ENST00000549940 LECT2O14960 151 aa18.25■□□□□ 0.51
GNPTAB-206ENST00000549940 PFN2P35080 140 aa18.25■□□□□ 0.51
GNPTAB-206ENST00000549940 BVES-AS1Q5T3Y7 98 aa18.25■□□□□ 0.51
GNPTAB-206ENST00000549940 C10orf25Q5T742 122 aa18.25■□□□□ 0.51
GNPTAB-206ENST00000549940 SNHG12Q9BXW3 62 aa18.24■□□□□ 0.51
GNPTAB-206ENST00000549940 PTTG1IPP53801 180 aa18.23■□□□□ 0.51
GNPTAB-206ENST00000549940 DAND5Q8N907 189 aa18.23■□□□□ 0.51
GNPTAB-206ENST00000549940 COX17Q14061 63 aa18.22■□□□□ 0.51
GNPTAB-206ENST00000549940 DNAH10Q8IVF4 4471 aa18.22■□□□□ 0.51
GNPTAB-206ENST00000549940 TRBV30A0A0K0K1B3 111 aa18.21■□□□□ 0.51
GNPTAB-206ENST00000549940 COPS9Q8WXC6 57 aa18.21■□□□□ 0.51
GNPTAB-206ENST00000549940 KMT2AQ03164 3969 aa18.21■□□□□ 0.51
GNPTAB-206ENST00000549940 SYCNQ0VAF6 134 aa18.2■□□□□ 0.5
GNPTAB-206ENST00000549940 Q6ZRN7 208 aaPredicted RBP18.2■□□□□ 0.5
GNPTAB-206ENST00000549940 MUSTN1Q8IVN3 82 aa18.2■□□□□ 0.5
GNPTAB-206ENST00000549940 IFITM1P13164 125 aa18.19■□□□□ 0.5
GNPTAB-206ENST00000549940 C14orf177Q52M58 125 aa18.19■□□□□ 0.5
GNPTAB-206ENST00000549940 C9orf116Q5BN46 136 aaPredicted RBP18.19■□□□□ 0.5
GNPTAB-206ENST00000549940 MIR7-3HGQ8N6C7 128 aa18.19■□□□□ 0.5
GNPTAB-206ENST00000549940 EREGO14944 169 aa18.18■□□□□ 0.5
GNPTAB-206ENST00000549940 FXYD2P54710 66 aa18.18■□□□□ 0.5
GNPTAB-206ENST00000549940 NPC2P61916 151 aa18.18■□□□□ 0.5
GNPTAB-206ENST00000549940 Q6ZRU5 148 aa18.18■□□□□ 0.5
GNPTAB-206ENST00000549940 C6orf48Q9UBA6 75 aa18.18■□□□□ 0.5
GNPTAB-206ENST00000549940 DNAH6Q9C0G6 4158 aa18.18■□□□□ 0.5
GNPTAB-206ENST00000549940 TMEM238LA0A1B0GVL6 79 aa18.17■□□□□ 0.5
GNPTAB-206ENST00000549940 A6NJY4 79 aa18.17■□□□□ 0.5
GNPTAB-206ENST00000549940 RPL24P83731 157 aaKnown RBP18.17■□□□□ 0.5
GNPTAB-206ENST00000549940 C1orf134Q5TEV5 83 aa18.17■□□□□ 0.5
GNPTAB-206ENST00000549940 WFDC2Q14508 124 aa18.16■□□□□ 0.5
GNPTAB-206ENST00000549940 LINC00308Q8TCZ7 52 aa18.15■□□□□ 0.5
GNPTAB-206ENST00000549940 A6NDN8 102 aa18.15■□□□□ 0.5
GNPTAB-206ENST00000549940 CARD19Q96LW7 228 aa18.15■□□□□ 0.5
GNPTAB-206ENST00000549940 LRCOL1A6NCL2 159 aa18.11■□□□□ 0.49
GNPTAB-206ENST00000549940 NHP2Q9NX24 153 aaKnown RBP18.1■□□□□ 0.49
GNPTAB-206ENST00000549940 A4D1N5 150 aa18.09■□□□□ 0.49
GNPTAB-206ENST00000549940 SLPIP03973 132 aa18.09■□□□□ 0.49
GNPTAB-206ENST00000549940 RNF151Q2KHN1 245 aa18.09■□□□□ 0.49
GNPTAB-206ENST00000549940 COL5A1-AS1Q5SY13 56 aa18.09■□□□□ 0.49
GNPTAB-206ENST00000549940 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.08■□□□□ 0.48
GNPTAB-206ENST00000549940 SOSTDC1Q6X4U4 206 aa18.07■□□□□ 0.48
GNPTAB-206ENST00000549940 PPDPFQ9H3Y8 114 aa18.07■□□□□ 0.48
GNPTAB-206ENST00000549940 EIF4EBP3O60516 100 aaPredicted RBP18.06■□□□□ 0.48
GNPTAB-206ENST00000549940 LBHQ53QV2 105 aaPredicted RBP18.06■□□□□ 0.48
GNPTAB-206ENST00000549940 DNAH2Q9P225 4427 aa18.05■□□□□ 0.48
GNPTAB-206ENST00000549940 NDUFC2-KCTD14E9PQ53 114 aa18.05■□□□□ 0.48
GNPTAB-206ENST00000549940 SND1-IT1Q9HBX3 110 aa18.05■□□□□ 0.48
GNPTAB-206ENST00000549940 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.04■□□□□ 0.48
GNPTAB-206ENST00000549940 CNBPP62633 177 aaKnown RBP18.04■□□□□ 0.48
GNPTAB-206ENST00000549940 A0A087WTM6 91 aa18.02■□□□□ 0.47
GNPTAB-206ENST00000549940 LCE6AA0A183 80 aa18■□□□□ 0.47
GNPTAB-206ENST00000549940 CFC1BP0CG36 223 aa18■□□□□ 0.47
GNPTAB-206ENST00000549940 CFC1P0CG37 223 aa18■□□□□ 0.47
GNPTAB-206ENST00000549940 Q8N814 137 aa18■□□□□ 0.47
GNPTAB-206ENST00000549940 LOC107984156A0A0G2JMH3 177 aa17.99■□□□□ 0.47
GNPTAB-206ENST00000549940 K7ERJ3 54 aa17.99■□□□□ 0.47
GNPTAB-206ENST00000549940 ARL17AQ8IVW1 177 aa17.99■□□□□ 0.47
GNPTAB-206ENST00000549940 RAB37Q96AX2 223 aa17.99■□□□□ 0.47
GNPTAB-206ENST00000549940 A0A1B0GWB2 263 aa17.99■□□□□ 0.47
GNPTAB-206ENST00000549940 TLX1NBP0CAT3 122 aa17.99■□□□□ 0.47
GNPTAB-206ENST00000549940 RPL18AQ02543 176 aaKnown RBP17.98■□□□□ 0.47
GNPTAB-206ENST00000549940 GAGE2EQ4V326 116 aa17.98■□□□□ 0.47
GNPTAB-206ENST00000549940 GAGE2DQ9UEU5 116 aa17.98■□□□□ 0.47
GNPTAB-206ENST00000549940 Q6ZRP5 223 aa17.97■□□□□ 0.47
GNPTAB-206ENST00000549940 A0A0B4J2C4 111 aa17.96■□□□□ 0.47
GNPTAB-206ENST00000549940 XAGE1AQ9HD64 81 aa17.96■□□□□ 0.47
GNPTAB-206ENST00000549940 LOC107984640A0A0U1RRK4 108 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms