RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 C20orf203Q8NBC4 194 aa4.66□□□□□ -1.66
CASC18-202ENST00000548557 OPRPNQ99935 248 aaPredicted RBP4.66□□□□□ -1.66
CASC18-202ENST00000548557 PRO0461Q9UI25 63 aa4.66□□□□□ -1.66
CASC18-202ENST00000548557 CMYA5Q8N3K9 4069 aa4.66□□□□□ -1.66
CASC18-202ENST00000548557 I3L3M4 83 aa4.66□□□□□ -1.66
CASC18-202ENST00000548557 COX7CP15954 63 aa4.66□□□□□ -1.66
CASC18-202ENST00000548557 AMELXQ99217 191 aa4.66□□□□□ -1.66
CASC18-202ENST00000548557 NOTCH1P46531 2555 aa4.66□□□□□ -1.66
CASC18-202ENST00000548557 H0Y9J4 135 aa4.65□□□□□ -1.66
CASC18-202ENST00000548557 DEFB121Q5J5C9 76 aa4.65□□□□□ -1.66
CASC18-202ENST00000548557 SLC25A29Q8N8R3 303 aa4.65□□□□□ -1.66
CASC18-202ENST00000548557 IGHV1-58A0A0C4DH39 117 aa4.65□□□□□ -1.67
CASC18-202ENST00000548557 TMEM223A0PJW6 202 aa4.65□□□□□ -1.67
CASC18-202ENST00000548557 IGHV3-30P01768 117 aa4.65□□□□□ -1.67
CASC18-202ENST00000548557 PRB2P02812 416 aaPredicted RBP4.65□□□□□ -1.67
CASC18-202ENST00000548557 IGHV3-30-5P0DP03 117 aa4.65□□□□□ -1.67
CASC18-202ENST00000548557 IGLV4-3A0A075B6K6 122 aa4.64□□□□□ -1.67
CASC18-202ENST00000548557 IGHV3OR16-12A0A075B7B8 117 aa4.64□□□□□ -1.67
CASC18-202ENST00000548557 FAM229AH3BQW9 127 aa4.64□□□□□ -1.67
CASC18-202ENST00000548557 LEPROTO15243 131 aa4.64□□□□□ -1.67
CASC18-202ENST00000548557 SERP1Q9Y6X1 66 aa4.64□□□□□ -1.67
CASC18-202ENST00000548557 A8MUN3 132 aa4.64□□□□□ -1.67
CASC18-202ENST00000548557 ZNF22P17026 224 aaPredicted RBP4.64□□□□□ -1.67
CASC18-202ENST00000548557 LGALS3P17931 250 aaKnown RBP4.64□□□□□ -1.67
CASC18-202ENST00000548557 UBE2D3P61077 147 aa4.64□□□□□ -1.67
CASC18-202ENST00000548557 NPC2P61916 151 aa4.64□□□□□ -1.67
CASC18-202ENST00000548557 UBE2D2P62837 147 aa4.64□□□□□ -1.67
CASC18-202ENST00000548557 DEFB135Q30KP9 77 aa4.64□□□□□ -1.67
CASC18-202ENST00000548557 TMEM263Q8WUH6 116 aaKnown RBP4.64□□□□□ -1.67
CASC18-202ENST00000548557 TCL1BO95988 128 aa4.63□□□□□ -1.67
CASC18-202ENST00000548557 MIFP14174 115 aa4.63□□□□□ -1.67
CASC18-202ENST00000548557 HTN1P15515 57 aa4.63□□□□□ -1.67
CASC18-202ENST00000548557 C11orf72Q8NBR9 251 aa4.63□□□□□ -1.67
CASC18-202ENST00000548557 FAM104AQ969W3 186 aa4.63□□□□□ -1.67
CASC18-202ENST00000548557 C16orf74Q96GX8 76 aa4.63□□□□□ -1.67
CASC18-202ENST00000548557 NACAE9PAV3 2078 aa4.63□□□□□ -1.67
CASC18-202ENST00000548557 A0A0J9YXV3 536 aa4.63□□□□□ -1.67
CASC18-202ENST00000548557 UBE2L6O14933 153 aa4.63□□□□□ -1.67
CASC18-202ENST00000548557 CFC1BP0CG36 223 aa4.63□□□□□ -1.67
CASC18-202ENST00000548557 CFC1P0CG37 223 aa4.63□□□□□ -1.67
CASC18-202ENST00000548557 CFAP126Q5VTH2 177 aa4.63□□□□□ -1.67
CASC18-202ENST00000548557 TEN1Q86WV5 123 aa4.63□□□□□ -1.67
CASC18-202ENST00000548557 LINC00337Q8N6G1 96 aa4.63□□□□□ -1.67
CASC18-202ENST00000548557 IGHV3-73A0A0B4J1V6 119 aa4.62□□□□□ -1.67
CASC18-202ENST00000548557 NDUFC2-KCTD14E9PQ53 114 aa4.62□□□□□ -1.67
CASC18-202ENST00000548557 M0R378 163 aa4.62□□□□□ -1.67
CASC18-202ENST00000548557 LST1O00453 97 aa4.62□□□□□ -1.67
CASC18-202ENST00000548557 ZNF73O43830 326 aaPredicted RBP4.62□□□□□ -1.67
CASC18-202ENST00000548557 PRM2P04554 102 aa4.62□□□□□ -1.67
CASC18-202ENST00000548557 CXCL5P42830 114 aa4.62□□□□□ -1.67
CASC18-202ENST00000548557 MP68P56378 58 aa4.62□□□□□ -1.67
CASC18-202ENST00000548557 SBSPONQ8IVN8 264 aa4.62□□□□□ -1.67
CASC18-202ENST00000548557 C6orf223Q8N319 242 aa4.62□□□□□ -1.67
CASC18-202ENST00000548557 DNAH3Q8TD57 4116 aa4.62□□□□□ -1.67
CASC18-202ENST00000548557 LOC107984156A0A0G2JMH3 177 aa4.62□□□□□ -1.67
CASC18-202ENST00000548557 SEC61BP60468 96 aaKnown RBP4.62□□□□□ -1.67
CASC18-202ENST00000548557 ARL17AQ8IVW1 177 aa4.62□□□□□ -1.67
CASC18-202ENST00000548557 COPS9Q8WXC6 57 aa4.62□□□□□ -1.67
CASC18-202ENST00000548557 B9D2Q9BPU9 175 aa4.62□□□□□ -1.67
CASC18-202ENST00000548557 PSMB2P49721 201 aa4.61□□□□□ -1.67
CASC18-202ENST00000548557 MRPS36P82909 103 aaKnown RBP4.61□□□□□ -1.67
CASC18-202ENST00000548557 SFTA2Q6UW10 78 aa4.61□□□□□ -1.67
CASC18-202ENST00000548557 Q6ZSN1 163 aa4.61□□□□□ -1.67
CASC18-202ENST00000548557 PRO1854Q9UHT4 67 aa4.61□□□□□ -1.67
CASC18-202ENST00000548557 IGHV3-64A0A075B6Q5 118 aa4.61□□□□□ -1.67
CASC18-202ENST00000548557 hADV29S1A0JD25 119 aa4.61□□□□□ -1.67
CASC18-202ENST00000548557 CEMP1Q6PRD7 247 aaPredicted RBP4.61□□□□□ -1.67
CASC18-202ENST00000548557 CHCHD7Q9BUK0 85 aa4.61□□□□□ -1.67
CASC18-202ENST00000548557 A0A0J9YXY3 114 aa4.6□□□□□ -1.67
CASC18-202ENST00000548557 TMEM256-PLSCR3K7ERE1 68 aa4.6□□□□□ -1.67
CASC18-202ENST00000548557 IGHV3-30-3P0DP02 117 aa4.6□□□□□ -1.67
CASC18-202ENST00000548557 Q8NAQ8 132 aa4.6□□□□□ -1.67
CASC18-202ENST00000548557 IGHV4-28A0A0C4DH34 117 aa4.6□□□□□ -1.67
CASC18-202ENST00000548557 IGHV3-53P01767 116 aa4.6□□□□□ -1.67
CASC18-202ENST00000548557 SS18Q15532 418 aa4.6□□□□□ -1.67
CASC18-202ENST00000548557 C6orf99Q4VX62 202 aa4.6□□□□□ -1.67
CASC18-202ENST00000548557 MUSTN1Q8IVN3 82 aa4.6□□□□□ -1.67
CASC18-202ENST00000548557 NTN5Q8WTR8 489 aaPredicted RBP4.6□□□□□ -1.67
CASC18-202ENST00000548557 UBE2D4Q9Y2X8 147 aa4.6□□□□□ -1.67
CASC18-202ENST00000548557 A0A0B4J2C4 111 aa4.59□□□□□ -1.67
CASC18-202ENST00000548557 TRBV7-7A0A0K0K1E9 115 aa4.59□□□□□ -1.67
CASC18-202ENST00000548557 IGHV3-33P01772 117 aa4.59□□□□□ -1.67
CASC18-202ENST00000548557 FP248Q71RG6 208 aaPredicted RBP4.59□□□□□ -1.67
CASC18-202ENST00000548557 TIMM21Q9BVV7 248 aa4.59□□□□□ -1.67
CASC18-202ENST00000548557 NOP10Q9NPE3 64 aaKnown RBP4.59□□□□□ -1.67
CASC18-202ENST00000548557 LINC00313P59037 77 aa4.58□□□□□ -1.68
CASC18-202ENST00000548557 RNASE13Q5GAN3 156 aaKnown RBP4.58□□□□□ -1.68
CASC18-202ENST00000548557 LITAFQ99732 161 aa4.58□□□□□ -1.68
CASC18-202ENST00000548557 NBEAL2Q6ZNJ1 2754 aa4.58□□□□□ -1.68
CASC18-202ENST00000548557 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.58□□□□□ -1.68
CASC18-202ENST00000548557 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.58□□□□□ -1.68
CASC18-202ENST00000548557 IGKV2-29A2NJV5 120 aaPredicted RBP4.58□□□□□ -1.68
CASC18-202ENST00000548557 COX7A2LO14548 114 aa4.58□□□□□ -1.68
CASC18-202ENST00000548557 SPART-AS1P0CW21 52 aa4.58□□□□□ -1.68
CASC18-202ENST00000548557 LINC00612Q8N6U2 182 aa4.58□□□□□ -1.68
CASC18-202ENST00000548557 C15orf53Q8NAA6 179 aa4.58□□□□□ -1.68
CASC18-202ENST00000548557 TRGV1A0A0A0MS02 117 aa4.57□□□□□ -1.68
CASC18-202ENST00000548557 PRR3P79522 188 aaKnown RBP4.57□□□□□ -1.68
CASC18-202ENST00000548557 LCA10Q71F78 164 aa4.57□□□□□ -1.68
CASC18-202ENST00000548557 VSIG2Q96IQ7 327 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms