RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 HNRNPA3P51991 378 aaKnown RBP11.16□□□□□ -0.62
ARFGAP1-220ENST00000547204 SCGB1D4Q6XE38 83 aa11.16□□□□□ -0.62
ARFGAP1-220ENST00000547204 GVQW2A0A096LPI5 108 aaPredicted RBP11.15□□□□□ -0.62
ARFGAP1-220ENST00000547204 DDTP30046 118 aa11.15□□□□□ -0.62
ARFGAP1-220ENST00000547204 HERV-K104P63124 156 aa11.15□□□□□ -0.62
ARFGAP1-220ENST00000547204 C2orf91Q6ZV80 131 aa11.15□□□□□ -0.62
ARFGAP1-220ENST00000547204 DNAH2Q9P225 4427 aa11.15□□□□□ -0.62
ARFGAP1-220ENST00000547204 A0A0J9YXY3 114 aa11.14□□□□□ -0.63
ARFGAP1-220ENST00000547204 PCP4L1A6NKN8 68 aa11.14□□□□□ -0.63
ARFGAP1-220ENST00000547204 USP17L23D6RBM5 183 aa11.14□□□□□ -0.63
ARFGAP1-220ENST00000547204 ZNF561-AS1K7EIQ3 104 aa11.14□□□□□ -0.63
ARFGAP1-220ENST00000547204 CKS1BP61024 79 aa11.14□□□□□ -0.63
ARFGAP1-220ENST00000547204 HIGD2BQ4VC39 106 aa11.14□□□□□ -0.63
ARFGAP1-220ENST00000547204 C6orf223Q8N319 242 aa11.14□□□□□ -0.63
ARFGAP1-220ENST00000547204 Q6ZRN7 208 aaPredicted RBP11.13□□□□□ -0.63
ARFGAP1-220ENST00000547204 NTN5Q8WTR8 489 aaPredicted RBP11.13□□□□□ -0.63
ARFGAP1-220ENST00000547204 HIGD1BQ9P298 99 aa11.13□□□□□ -0.63
ARFGAP1-220ENST00000547204 C2orf82Q6UX34 121 aa11.12□□□□□ -0.63
ARFGAP1-220ENST00000547204 LINC00526Q96FQ7 95 aa11.12□□□□□ -0.63
ARFGAP1-220ENST00000547204 C2orf48Q96LS8 159 aa11.11□□□□□ -0.63
ARFGAP1-220ENST00000547204 FAT2Q9NYQ8 4349 aa11.11□□□□□ -0.63
ARFGAP1-220ENST00000547204 F8WDY8 70 aa11.1□□□□□ -0.63
ARFGAP1-220ENST00000547204 HERC2O95714 4834 aa11.1□□□□□ -0.63
ARFGAP1-220ENST00000547204 LECT2O14960 151 aa11.09□□□□□ -0.63
ARFGAP1-220ENST00000547204 MEIG1Q5JSS6 88 aa11.09□□□□□ -0.63
ARFGAP1-220ENST00000547204 C1orf134Q5TEV5 83 aa11.09□□□□□ -0.63
ARFGAP1-220ENST00000547204 CAMK2N2Q96S95 79 aa11.09□□□□□ -0.63
ARFGAP1-220ENST00000547204 TMEM238C9JI98 176 aa11.09□□□□□ -0.63
ARFGAP1-220ENST00000547204 TIMM17BO60830 172 aa11.09□□□□□ -0.63
ARFGAP1-220ENST00000547204 UNQ6190/PRO20217Q6UXQ8 127 aa11.09□□□□□ -0.63
ARFGAP1-220ENST00000547204 DNAH17Q9UFH2 4485 aa11.08□□□□□ -0.63
ARFGAP1-220ENST00000547204 CTAG1AP78358 180 aa11.08□□□□□ -0.64
ARFGAP1-220ENST00000547204 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
ARFGAP1-220ENST00000547204 WFDC2Q14508 124 aa11.08□□□□□ -0.64
ARFGAP1-220ENST00000547204 C14orf177Q52M58 125 aa11.08□□□□□ -0.64
ARFGAP1-220ENST00000547204 LINC00336Q6ZUF6 198 aa11.08□□□□□ -0.64
ARFGAP1-220ENST00000547204 LITAFQ99732 161 aa11.08□□□□□ -0.64
ARFGAP1-220ENST00000547204 LINC00587B1AMM8 73 aa11.07□□□□□ -0.64
ARFGAP1-220ENST00000547204 C10orf25Q5T742 122 aa11.07□□□□□ -0.64
ARFGAP1-220ENST00000547204 SPANXB1Q9NS25 103 aaPredicted RBP11.07□□□□□ -0.64
ARFGAP1-220ENST00000547204 ERG28Q9UKR5 140 aa11.07□□□□□ -0.64
ARFGAP1-220ENST00000547204 TRBV30A0A0K0K1B3 111 aa11.06□□□□□ -0.64
ARFGAP1-220ENST00000547204 LRCOL1A6NCL2 159 aa11.06□□□□□ -0.64
ARFGAP1-220ENST00000547204 SMIM13P0DJ93 91 aa11.06□□□□□ -0.64
ARFGAP1-220ENST00000547204 HSD52Q0P140 79 aa11.06□□□□□ -0.64
ARFGAP1-220ENST00000547204 SYCNQ0VAF6 134 aa11.05□□□□□ -0.64
ARFGAP1-220ENST00000547204 TAL2Q16559 108 aa11.05□□□□□ -0.64
ARFGAP1-220ENST00000547204 Q6ZRU5 148 aa11.05□□□□□ -0.64
ARFGAP1-220ENST00000547204 HIST1H4GQ99525 98 aa11.05□□□□□ -0.64
ARFGAP1-220ENST00000547204 C6orf48Q9UBA6 75 aa11.05□□□□□ -0.64
ARFGAP1-220ENST00000547204 PKHD1P08F94 4074 aa11.04□□□□□ -0.64
ARFGAP1-220ENST00000547204 SRSF9Q13242 221 aaKnown RBP eCLIP11.04□□□□□ -0.643e-12■□□□□ 10.4
ARFGAP1-220ENST00000547204 ADAMTSL4-AS1Q5T5F5 129 aa11.04□□□□□ -0.64
ARFGAP1-220ENST00000547204 SPANXDQ9BXN6 97 aa11.04□□□□□ -0.64
ARFGAP1-220ENST00000547204 SPANXCQ9NY87 97 aa11.04□□□□□ -0.64
ARFGAP1-220ENST00000547204 A0A0U1RRA0 63 aa11.03□□□□□ -0.64
ARFGAP1-220ENST00000547204 RTL8CO15255 209 aa11.03□□□□□ -0.64
ARFGAP1-220ENST00000547204 PFN2P35080 140 aa11.03□□□□□ -0.64
ARFGAP1-220ENST00000547204 LINC00158P58513 81 aa11.03□□□□□ -0.64
ARFGAP1-220ENST00000547204 COX17Q14061 63 aa11.03□□□□□ -0.64
ARFGAP1-220ENST00000547204 Q6ZVH6 145 aa11.03□□□□□ -0.64
ARFGAP1-220ENST00000547204 CARD19Q96LW7 228 aa11.03□□□□□ -0.64
ARFGAP1-220ENST00000547204 C9orf116Q5BN46 136 aaPredicted RBP11.02□□□□□ -0.65
ARFGAP1-220ENST00000547204 SLPIP03973 132 aa11.01□□□□□ -0.65
ARFGAP1-220ENST00000547204 RNF151Q2KHN1 245 aa11.01□□□□□ -0.65
ARFGAP1-220ENST00000547204 DAND5Q8N907 189 aa11.01□□□□□ -0.65
ARFGAP1-220ENST00000547204 KIAA1109Q2LD37 5005 aa11□□□□□ -0.65
ARFGAP1-220ENST00000547204 A0A087WTM6 91 aa11□□□□□ -0.65
ARFGAP1-220ENST00000547204 A0A1B0GVY2 172 aa11□□□□□ -0.65
ARFGAP1-220ENST00000547204 MIR7-3HGQ8N6C7 128 aa11□□□□□ -0.65
ARFGAP1-220ENST00000547204 PKD1P98161 4303 aa10.99□□□□□ -0.65
ARFGAP1-220ENST00000547204 M0R143 59 aa10.99□□□□□ -0.65
ARFGAP1-220ENST00000547204 GCSHP23434 173 aa10.99□□□□□ -0.65
ARFGAP1-220ENST00000547204 HINT1P49773 126 aaPredicted RBP10.99□□□□□ -0.65
ARFGAP1-220ENST00000547204 CNBPP62633 177 aaKnown RBP10.99□□□□□ -0.65
ARFGAP1-220ENST00000547204 CEND1Q8N111 149 aa10.99□□□□□ -0.65
ARFGAP1-220ENST00000547204 Q8N814 137 aa10.99□□□□□ -0.65
ARFGAP1-220ENST00000547204 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.98□□□□□ -0.65
ARFGAP1-220ENST00000547204 IFITM1P13164 125 aa10.98□□□□□ -0.65
ARFGAP1-220ENST00000547204 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.97□□□□□ -0.65
ARFGAP1-220ENST00000547204 NPC2P61916 151 aa10.97□□□□□ -0.65
ARFGAP1-220ENST00000547204 BVES-AS1Q5T3Y7 98 aa10.97□□□□□ -0.65
ARFGAP1-220ENST00000547204 MUSTN1Q8IVN3 82 aa10.97□□□□□ -0.65
ARFGAP1-220ENST00000547204 LINC00308Q8TCZ7 52 aa10.97□□□□□ -0.65
ARFGAP1-220ENST00000547204 COPS9Q8WXC6 57 aa10.97□□□□□ -0.65
ARFGAP1-220ENST00000547204 DNAH11Q96DT5 4516 aa10.97□□□□□ -0.65
ARFGAP1-220ENST00000547204 DYNC1H1Q14204 4646 aaKnown RBP10.96□□□□□ -0.65
ARFGAP1-220ENST00000547204 PTTG1IPP53801 180 aa10.96□□□□□ -0.65
ARFGAP1-220ENST00000547204 NDUFC2-KCTD14E9PQ53 114 aa10.95□□□□□ -0.66
ARFGAP1-220ENST00000547204 EREGO14944 169 aa10.94□□□□□ -0.66
ARFGAP1-220ENST00000547204 TLX1NBP0CAT3 122 aa10.94□□□□□ -0.66
ARFGAP1-220ENST00000547204 FXYD2P54710 66 aa10.94□□□□□ -0.66
ARFGAP1-220ENST00000547204 RPL24P83731 157 aaKnown RBP10.94□□□□□ -0.66
ARFGAP1-220ENST00000547204 BATFQ16520 125 aa10.94□□□□□ -0.66
ARFGAP1-220ENST00000547204 SOSTDC1Q6X4U4 206 aa10.94□□□□□ -0.66
ARFGAP1-220ENST00000547204 PPDPFQ9H3Y8 114 aa10.94□□□□□ -0.66
ARFGAP1-220ENST00000547204 TNP2Q05952 138 aa10.93□□□□□ -0.66
ARFGAP1-220ENST00000547204 SNHG12Q9BXW3 62 aa10.93□□□□□ -0.66
ARFGAP1-220ENST00000547204 SND1-IT1Q9HBX3 110 aa10.93□□□□□ -0.66
ARFGAP1-220ENST00000547204 TMEM238LA0A1B0GVL6 79 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms