RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 VCX2Q9H322 139 aa11.14□□□□□ -0.63
CHERP-204ENST00000546538 TOMM7Q9P0U1 55 aa11.14□□□□□ -0.63
CHERP-204ENST00000546538 CDKN2A-AS1Q9UH64 79 aa11.14□□□□□ -0.63
CHERP-204ENST00000546538 Q8IZM0 81 aa11.13□□□□□ -0.63
CHERP-204ENST00000546538 ANAPC16Q96DE5 110 aa11.13□□□□□ -0.63
CHERP-204ENST00000546538 XAGE1AQ9HD64 81 aa11.13□□□□□ -0.63
CHERP-204ENST00000546538 NPSP0C0P6 89 aa11.12□□□□□ -0.63
CHERP-204ENST00000546538 ORMDL2Q53FV1 153 aa11.12□□□□□ -0.63
CHERP-204ENST00000546538 C22orf24Q9Y442 160 aa11.12□□□□□ -0.63
CHERP-204ENST00000546538 MT-ND4LP03901 98 aa11.11□□□□□ -0.63
CHERP-204ENST00000546538 K7EMI3 77 aa11.09□□□□□ -0.63
CHERP-204ENST00000546538 ZNF861PO60384 105 aa11.09□□□□□ -0.63
CHERP-204ENST00000546538 PRSS2P07478 247 aa11.09□□□□□ -0.63
CHERP-204ENST00000546538 CKS1BP61024 79 aa11.09□□□□□ -0.63
CHERP-204ENST00000546538 RHEBQ15382 184 aa11.09□□□□□ -0.63
CHERP-204ENST00000546538 C6orf226Q5I0X4 101 aa11.09□□□□□ -0.63
CHERP-204ENST00000546538 ALKBH7Q9BT30 221 aaPredicted RBP11.09□□□□□ -0.63
CHERP-204ENST00000546538 TOMM6Q96B49 74 aa11.09□□□□□ -0.63
CHERP-204ENST00000546538 HERVK_113P63121 156 aa11.08□□□□□ -0.64
CHERP-204ENST00000546538 KIAA1644Q3SXP7 199 aa11.08□□□□□ -0.64
CHERP-204ENST00000546538 TIMM17AQ99595 171 aa11.08□□□□□ -0.64
CHERP-204ENST00000546538 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.64
CHERP-204ENST00000546538 CTDSP1Q9GZU7 261 aa11.07□□□□□ -0.64
CHERP-204ENST00000546538 SMIM1B2RUZ4 78 aa11.06□□□□□ -0.64
CHERP-204ENST00000546538 F8VRH5 84 aa11.06□□□□□ -0.64
CHERP-204ENST00000546538 RPS10P5Q9NQ39 176 aa11.05□□□□□ -0.64
CHERP-204ENST00000546538 A0A087X002 238 aa11.04□□□□□ -0.64
CHERP-204ENST00000546538 NUPR1O60356 82 aa11.03□□□□□ -0.64
CHERP-204ENST00000546538 RPL13AP40429 203 aaKnown RBP11.03□□□□□ -0.64
CHERP-204ENST00000546538 MRPL55Q7Z7F7 128 aaKnown RBP11.03□□□□□ -0.64
CHERP-204ENST00000546538 GEMIN7Q9H840 131 aaKnown RBP11.03□□□□□ -0.64
CHERP-204ENST00000546538 IGLV5-45A0A087WSX0 123 aa11.02□□□□□ -0.64
CHERP-204ENST00000546538 ERASQ7Z444 233 aa11.02□□□□□ -0.64
CHERP-204ENST00000546538 TP73-AS1Q9UF72 201 aa11.02□□□□□ -0.64
CHERP-204ENST00000546538 LINC01546A6NGU7 62 aa11.01□□□□□ -0.65
CHERP-204ENST00000546538 SEC11AP67812 179 aa11.01□□□□□ -0.65
CHERP-204ENST00000546538 LBHQ53QV2 105 aaPredicted RBP11.01□□□□□ -0.65
CHERP-204ENST00000546538 PRR4Q16378 134 aa11.01□□□□□ -0.65
CHERP-204ENST00000546538 PAPPA-AS1Q5QFB9 102 aa11.01□□□□□ -0.65
CHERP-204ENST00000546538 LINC00167Q96N53 147 aa11.01□□□□□ -0.65
CHERP-204ENST00000546538 SCGB3A1Q96QR1 104 aa11.01□□□□□ -0.65
CHERP-204ENST00000546538 TINCRA0A1B0GVN0 87 aa11□□□□□ -0.65
CHERP-204ENST00000546538 BCE1O60756 84 aa11□□□□□ -0.65
CHERP-204ENST00000546538 SMCO4Q9NRQ5 59 aa11□□□□□ -0.65
CHERP-204ENST00000546538 RPL37AP8A6NKH3 93 aa10.99□□□□□ -0.65
CHERP-204ENST00000546538 CXCL5P42830 114 aa10.99□□□□□ -0.65
CHERP-204ENST00000546538 PDZD11Q5EBL8 140 aa10.99□□□□□ -0.65
CHERP-204ENST00000546538 COX7B2Q8TF08 81 aa10.99□□□□□ -0.65
CHERP-204ENST00000546538 SCO1O75880 301 aa10.98□□□□□ -0.65
CHERP-204ENST00000546538 SPINK8P0C7L1 97 aa10.98□□□□□ -0.65
CHERP-204ENST00000546538 KRTAP13-1Q8IUC0 172 aa10.98□□□□□ -0.65
CHERP-204ENST00000546538 CST9LQ9H4G1 147 aa10.98□□□□□ -0.65
CHERP-204ENST00000546538 TSPAN13O95857 204 aa10.97□□□□□ -0.65
CHERP-204ENST00000546538 S100PP25815 95 aa10.97□□□□□ -0.65
CHERP-204ENST00000546538 G0S2P27469 103 aa10.97□□□□□ -0.65
CHERP-204ENST00000546538 ANAPC11Q9NYG5 84 aa10.97□□□□□ -0.65
CHERP-204ENST00000546538 GAGE10A6NGK3 116 aa10.96□□□□□ -0.65
CHERP-204ENST00000546538 IGLV5-37A0A075B6J1 123 aa10.95□□□□□ -0.66
CHERP-204ENST00000546538 CBLN2Q8IUK8 224 aa10.95□□□□□ -0.66
CHERP-204ENST00000546538 TRAV9-1A0A075B6T8 112 aa10.94□□□□□ -0.66
CHERP-204ENST00000546538 RPL28P46779 137 aaKnown RBP10.94□□□□□ -0.66
CHERP-204ENST00000546538 RAB5BP61020 215 aa10.94□□□□□ -0.66
CHERP-204ENST00000546538 KRTAP13-2Q52LG2 175 aa10.93□□□□□ -0.66
CHERP-204ENST00000546538 GNB1LQ9BYB4 327 aa10.93□□□□□ -0.66
CHERP-204ENST00000546538 A0A096LNJ9 63 aa10.92□□□□□ -0.66
CHERP-204ENST00000546538 PMVKQ15126 192 aa10.92□□□□□ -0.66
CHERP-204ENST00000546538 MUC17Q685J3 4493 aa10.9□□□□□ -0.66
CHERP-204ENST00000546538 IGLV5-39A0A0G2JS06 123 aa10.9□□□□□ -0.66
CHERP-204ENST00000546538 CRYGAP11844 174 aa10.9□□□□□ -0.66
CHERP-204ENST00000546538 URB1-AS1Q96HZ7 61 aa10.9□□□□□ -0.66
CHERP-204ENST00000546538 Q8NDZ9 215 aa10.89□□□□□ -0.67
CHERP-204ENST00000546538 TYMSOSQ8TAI1 123 aa10.89□□□□□ -0.67
CHERP-204ENST00000546538 FAT4Q6V0I7 4981 aa10.89□□□□□ -0.67
CHERP-204ENST00000546538 IGLC3P0DOY3 106 aa10.88□□□□□ -0.67
CHERP-204ENST00000546538 IGKV2-28A0A075B6P5 120 aa10.87□□□□□ -0.67
CHERP-204ENST00000546538 IGKV2D-28P01615 120 aa10.87□□□□□ -0.67
CHERP-204ENST00000546538 MRPL18Q9H0U6 180 aaKnown RBP10.87□□□□□ -0.67
CHERP-204ENST00000546538 LINC01549A6NIU2 74 aa10.86□□□□□ -0.67
CHERP-204ENST00000546538 VPREB1P12018 145 aa10.86□□□□□ -0.67
CHERP-204ENST00000546538 FA2HQ7L5A8 372 aa10.86□□□□□ -0.67
CHERP-204ENST00000546538 YPEL4Q96NS1 127 aa10.86□□□□□ -0.67
CHERP-204ENST00000546538 ZNF22P17026 224 aaPredicted RBP10.85□□□□□ -0.67
CHERP-204ENST00000546538 PFN2P35080 140 aa10.85□□□□□ -0.67
CHERP-204ENST00000546538 NKAPP1Q8N9T2 125 aa10.85□□□□□ -0.67
CHERP-204ENST00000546538 COLCA2A8K830 154 aa10.84□□□□□ -0.67
CHERP-204ENST00000546538 ATP5LO75964 103 aa10.84□□□□□ -0.67
CHERP-204ENST00000546538 PRLHP81277 87 aa10.84□□□□□ -0.67
CHERP-204ENST00000546538 FABP9Q0Z7S8 132 aa10.84□□□□□ -0.67
CHERP-204ENST00000546538 SND1-IT1Q9HBX3 110 aa10.84□□□□□ -0.67
CHERP-204ENST00000546538 TMEM238C9JI98 176 aa10.84□□□□□ -0.67
CHERP-204ENST00000546538 UBE2AP49459 152 aa10.84□□□□□ -0.67
CHERP-204ENST00000546538 RETNLBQ9BQ08 111 aa10.84□□□□□ -0.67
CHERP-204ENST00000546538 H3BRM9 83 aa10.83□□□□□ -0.68
CHERP-204ENST00000546538 COX19Q49B96 90 aa10.83□□□□□ -0.68
CHERP-204ENST00000546538 PMCHL1Q16048 86 aa10.82□□□□□ -0.68
CHERP-204ENST00000546538 FAM229BQ4G0N7 80 aa10.82□□□□□ -0.68
CHERP-204ENST00000546538 ERG28Q9UKR5 140 aa10.82□□□□□ -0.68
CHERP-204ENST00000546538 C18orf32Q8TCD1 76 aa10.81□□□□□ -0.68
CHERP-204ENST00000546538 TMEM126AQ9H061 195 aa10.81□□□□□ -0.68
CHERP-204ENST00000546538 M0R378 163 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms