RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 CKS1BP61024 79 aa20.21■□□□□ 0.83
CCM2-219ENST00000544363 COX11Q9Y6N1 276 aa20.21■□□□□ 0.83
CCM2-219ENST00000544363 EREGO14944 169 aa20.2■□□□□ 0.82
CCM2-219ENST00000544363 BATFQ16520 125 aa20.2■□□□□ 0.82
CCM2-219ENST00000544363 C2orf82Q6UX34 121 aa20.2■□□□□ 0.82
CCM2-219ENST00000544363 CIRBPQ14011 172 aaKnown RBP20.19■□□□□ 0.82
CCM2-219ENST00000544363 C15orf56Q8N910 161 aa20.19■□□□□ 0.82
CCM2-219ENST00000544363 MEIG1Q5JSS6 88 aa20.18■□□□□ 0.82
CCM2-219ENST00000544363 CEND1Q8N111 149 aa20.18■□□□□ 0.82
CCM2-219ENST00000544363 TM2D2Q9BX73 214 aa20.18■□□□□ 0.82
CCM2-219ENST00000544363 GCSHP23434 173 aa20.17■□□□□ 0.82
CCM2-219ENST00000544363 ADAMTSL4-AS1Q5T5F5 129 aa20.16■□□□□ 0.82
CCM2-219ENST00000544363 C6orf223Q8N319 242 aa20.16■□□□□ 0.82
CCM2-219ENST00000544363 LINC00526Q96FQ7 95 aa20.15■□□□□ 0.82
CCM2-219ENST00000544363 SPANXDQ9BXN6 97 aa20.15■□□□□ 0.82
CCM2-219ENST00000544363 SPANXCQ9NY87 97 aa20.15■□□□□ 0.82
CCM2-219ENST00000544363 HIGD2BQ4VC39 106 aa20.14■□□□□ 0.81
CCM2-219ENST00000544363 NTN5Q8WTR8 489 aaPredicted RBP20.14■□□□□ 0.81
CCM2-219ENST00000544363 ZNF561-AS1K7EIQ3 104 aa20.13■□□□□ 0.81
CCM2-219ENST00000544363 SMIM13P0DJ93 91 aa20.13■□□□□ 0.81
CCM2-219ENST00000544363 Q6ZVH6 145 aa20.13■□□□□ 0.81
CCM2-219ENST00000544363 GVQW2A0A096LPI5 108 aaPredicted RBP20.12■□□□□ 0.81
CCM2-219ENST00000544363 A0A0U1RRA0 63 aa20.11■□□□□ 0.81
CCM2-219ENST00000544363 FXYD2P54710 66 aa20.11■□□□□ 0.81
CCM2-219ENST00000544363 UNQ6190/PRO20217Q6UXQ8 127 aa20.09■□□□□ 0.81
CCM2-219ENST00000544363 ERG28Q9UKR5 140 aa20.09■□□□□ 0.81
CCM2-219ENST00000544363 USP17L23D6RBM5 183 aa20.08■□□□□ 0.8
CCM2-219ENST00000544363 C10orf25Q5T742 122 aa20.08■□□□□ 0.8
CCM2-219ENST00000544363 DAND5Q8N907 189 aa20.08■□□□□ 0.8
CCM2-219ENST00000544363 C2orf48Q96LS8 159 aa20.08■□□□□ 0.8
CCM2-219ENST00000544363 PTTG1IPP53801 180 aa20.07■□□□□ 0.8
CCM2-219ENST00000544363 MUSTN1Q8IVN3 82 aa20.07■□□□□ 0.8
CCM2-219ENST00000544363 LINC00158P58513 81 aa20.06■□□□□ 0.8
CCM2-219ENST00000544363 M0R2N4 97 aa20.05■□□□□ 0.8
CCM2-219ENST00000544363 PSCAO43653 123 aa20.05■□□□□ 0.8
CCM2-219ENST00000544363 LY6G6CO95867 125 aa20.05■□□□□ 0.8
CCM2-219ENST00000544363 PFN2P35080 140 aa20.05■□□□□ 0.8
CCM2-219ENST00000544363 LINC00476Q8WZB0 136 aa20.05■□□□□ 0.8
CCM2-219ENST00000544363 F8WDY8 70 aa20.05■□□□□ 0.8
CCM2-219ENST00000544363 CAMK2N2Q96S95 79 aa20.05■□□□□ 0.8
CCM2-219ENST00000544363 IFITM1P13164 125 aa20.04■□□□□ 0.8
CCM2-219ENST00000544363 LBHQ53QV2 105 aaPredicted RBP20.03■□□□□ 0.8
CCM2-219ENST00000544363 COX17Q14061 63 aa20.02■□□□□ 0.8
CCM2-219ENST00000544363 Q6ZR54 194 aa20.02■□□□□ 0.8
CCM2-219ENST00000544363 MIR7-3HGQ8N6C7 128 aa20.02■□□□□ 0.8
CCM2-219ENST00000544363 A6NDN8 102 aa20.02■□□□□ 0.79
CCM2-219ENST00000544363 NPC2P61916 151 aa20.02■□□□□ 0.79
CCM2-219ENST00000544363 COL5A1-AS1Q5SY13 56 aa20.02■□□□□ 0.79
CCM2-219ENST00000544363 RPL24P83731 157 aaKnown RBP20.01■□□□□ 0.79
CCM2-219ENST00000544363 C9orf116Q5BN46 136 aaPredicted RBP20.01■□□□□ 0.79
CCM2-219ENST00000544363 LINC00308Q8TCZ7 52 aa20.01■□□□□ 0.79
CCM2-219ENST00000544363 TMEM238LA0A1B0GVL6 79 aa20■□□□□ 0.79
CCM2-219ENST00000544363 A6NJY4 79 aa20■□□□□ 0.79
CCM2-219ENST00000544363 C6orf48Q9UBA6 75 aa20■□□□□ 0.79
CCM2-219ENST00000544363 TRBV30A0A0K0K1B3 111 aa19.99■□□□□ 0.79
CCM2-219ENST00000544363 LECT2O14960 151 aa19.99■□□□□ 0.79
CCM2-219ENST00000544363 Q6ZRN7 208 aaPredicted RBP19.98■□□□□ 0.79
CCM2-219ENST00000544363 Q6ZRU5 148 aa19.98■□□□□ 0.79
CCM2-219ENST00000544363 EIF4EBP3O60516 100 aaPredicted RBP19.98■□□□□ 0.79
CCM2-219ENST00000544363 COPS9Q8WXC6 57 aa19.98■□□□□ 0.79
CCM2-219ENST00000544363 NHP2Q9NX24 153 aaKnown RBP19.98■□□□□ 0.79
CCM2-219ENST00000544363 ALMS1Q8TCU4 4167 aa19.97■□□□□ 0.79
CCM2-219ENST00000544363 A4D1N5 150 aa19.96■□□□□ 0.79
CCM2-219ENST00000544363 SYCNQ0VAF6 134 aa19.96■□□□□ 0.79
CCM2-219ENST00000544363 SOSTDC1Q6X4U4 206 aa19.96■□□□□ 0.79
CCM2-219ENST00000544363 WFDC2Q14508 124 aa19.95■□□□□ 0.78
CCM2-219ENST00000544363 DNAH10Q8IVF4 4471 aa19.95■□□□□ 0.78
CCM2-219ENST00000544363 PPDPFQ9H3Y8 114 aa19.94■□□□□ 0.78
CCM2-219ENST00000544363 DNAH6Q9C0G6 4158 aa19.94■□□□□ 0.78
CCM2-219ENST00000544363 KMT2AQ03164 3969 aa19.93■□□□□ 0.78
CCM2-219ENST00000544363 A0A1B0GWB2 263 aa19.92■□□□□ 0.78
CCM2-219ENST00000544363 SLPIP03973 132 aa19.91■□□□□ 0.78
CCM2-219ENST00000544363 K7ERJ3 54 aa19.9■□□□□ 0.78
CCM2-219ENST00000544363 CARD19Q96LW7 228 aa19.9■□□□□ 0.78
CCM2-219ENST00000544363 CFC1BP0CG36 223 aa19.89■□□□□ 0.77
CCM2-219ENST00000544363 CFC1P0CG37 223 aa19.89■□□□□ 0.77
CCM2-219ENST00000544363 TRAV16A0A0A6YYK6 109 aaPredicted RBP19.88■□□□□ 0.77
CCM2-219ENST00000544363 C14orf177Q52M58 125 aa19.88■□□□□ 0.77
CCM2-219ENST00000544363 LRCOL1A6NCL2 159 aa19.87■□□□□ 0.77
CCM2-219ENST00000544363 RNF151Q2KHN1 245 aa19.87■□□□□ 0.77
CCM2-219ENST00000544363 TAX1BP3O14907 124 aa19.86■□□□□ 0.77
CCM2-219ENST00000544363 LOC107984156A0A0G2JMH3 177 aa19.85■□□□□ 0.77
CCM2-219ENST00000544363 ARL17AQ8IVW1 177 aa19.85■□□□□ 0.77
CCM2-219ENST00000544363 SND1-IT1Q9HBX3 110 aa19.85■□□□□ 0.77
CCM2-219ENST00000544363 C1orf134Q5TEV5 83 aa19.84■□□□□ 0.77
CCM2-219ENST00000544363 RAB37Q96AX2 223 aa19.84■□□□□ 0.77
CCM2-219ENST00000544363 A0A0B4J2C4 111 aa19.83■□□□□ 0.76
CCM2-219ENST00000544363 NDUFC2-KCTD14E9PQ53 114 aa19.81■□□□□ 0.76
CCM2-219ENST00000544363 CNBPP62633 177 aaKnown RBP19.79■□□□□ 0.76
CCM2-219ENST00000544363 PRO1854Q9UHT4 67 aa19.78■□□□□ 0.76
CCM2-219ENST00000544363 TLX1NBP0CAT3 122 aa19.77■□□□□ 0.76
CCM2-219ENST00000544363 Q6ZRP5 223 aa19.75■□□□□ 0.75
CCM2-219ENST00000544363 IGLV2-33A0A075B6J2 118 aaPredicted RBP19.73■□□□□ 0.75
CCM2-219ENST00000544363 A0A087WTM6 91 aa19.73■□□□□ 0.75
CCM2-219ENST00000544363 C9orf118A6NHY6 69 aa19.73■□□□□ 0.75
CCM2-219ENST00000544363 XAGE1AQ9HD64 81 aa19.73■□□□□ 0.75
CCM2-219ENST00000544363 GAGE2EQ4V326 116 aa19.72■□□□□ 0.75
CCM2-219ENST00000544363 PGPEP1Q9NXJ5 209 aa19.72■□□□□ 0.75
CCM2-219ENST00000544363 GAGE2DQ9UEU5 116 aa19.72■□□□□ 0.75
CCM2-219ENST00000544363 DNAH2Q9P225 4427 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms