RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 STAB1Q9NY15 2570 aa10.66□□□□□ -0.7
CHFR-223ENST00000544268 TRGV1A0A0A0MS02 117 aa10.66□□□□□ -0.7
CHFR-223ENST00000544268 VSIG2Q96IQ7 327 aa10.66□□□□□ -0.7
CHFR-223ENST00000544268 DSCR8Q96T75 97 aa10.66□□□□□ -0.7
CHFR-223ENST00000544268 Q6ZTI0 123 aa10.65□□□□□ -0.7
CHFR-223ENST00000544268 CMC4P56277 68 aaPredicted RBP10.64□□□□□ -0.71
CHFR-223ENST00000544268 BAALC-AS2P0C853 105 aa10.63□□□□□ -0.71
CHFR-223ENST00000544268 TIRAPP58753 221 aa10.63□□□□□ -0.71
CHFR-223ENST00000544268 C9orf66Q5T8R8 295 aa10.63□□□□□ -0.71
CHFR-223ENST00000544268 INAFM2P0DMQ5 153 aa10.63□□□□□ -0.71
CHFR-223ENST00000544268 COX6A2Q02221 97 aa10.63□□□□□ -0.71
CHFR-223ENST00000544268 RPL18AQ02543 176 aaKnown RBP10.62□□□□□ -0.71
CHFR-223ENST00000544268 CDKN2A-AS1Q9UH64 79 aa10.62□□□□□ -0.71
CHFR-223ENST00000544268 GIG44P09565 113 aaPredicted RBP10.62□□□□□ -0.71
CHFR-223ENST00000544268 FAM222AQ5U5X8 452 aa10.62□□□□□ -0.71
CHFR-223ENST00000544268 PFN2P35080 140 aa10.61□□□□□ -0.71
CHFR-223ENST00000544268 NOP10Q9NPE3 64 aaKnown RBP10.6□□□□□ -0.71
CHFR-223ENST00000544268 C22orf24Q9Y442 160 aa10.6□□□□□ -0.71
CHFR-223ENST00000544268 COL6A5A8TX70 2615 aa10.6□□□□□ -0.71
CHFR-223ENST00000544268 LOC100131303A0A0U1RQF7 123 aa10.59□□□□□ -0.71
CHFR-223ENST00000544268 FAM236DA0A1B0GTK5 79 aa10.59□□□□□ -0.71
CHFR-223ENST00000544268 FAM236CP0DP71 79 aa10.59□□□□□ -0.71
CHFR-223ENST00000544268 NTM-AS1Q6ZSK4 140 aa10.59□□□□□ -0.71
CHFR-223ENST00000544268 SERP2Q8N6R1 65 aa10.59□□□□□ -0.71
CHFR-223ENST00000544268 WFDC9Q8NEX5 89 aa10.59□□□□□ -0.71
CHFR-223ENST00000544268 CIRBPQ14011 172 aaKnown RBP10.59□□□□□ -0.71
CHFR-223ENST00000544268 UPK3BQ9BT76 320 aa10.59□□□□□ -0.71
CHFR-223ENST00000544268 TRAV13-1A0A0B4J241 112 aa10.58□□□□□ -0.72
CHFR-223ENST00000544268 A0A0U1RRA0 63 aa10.58□□□□□ -0.72
CHFR-223ENST00000544268 ZNF625Q96I27 306 aaPredicted RBP10.58□□□□□ -0.72
CHFR-223ENST00000544268 IL17DQ8TAD2 202 aa10.58□□□□□ -0.72
CHFR-223ENST00000544268 LINC00308Q8TCZ7 52 aa10.58□□□□□ -0.72
CHFR-223ENST00000544268 NDUFA1O15239 70 aa10.57□□□□□ -0.72
CHFR-223ENST00000544268 C1orf195Q5TG92 126 aa10.57□□□□□ -0.72
CHFR-223ENST00000544268 CMYA5Q8N3K9 4069 aa10.56□□□□□ -0.72
CHFR-223ENST00000544268 PIK3CD-AS1Q5SR53 167 aa10.56□□□□□ -0.72
CHFR-223ENST00000544268 PKD1L1Q8TDX9 2849 aa10.55□□□□□ -0.72
CHFR-223ENST00000544268 PLAC8L1A1L4L8 177 aa10.55□□□□□ -0.72
CHFR-223ENST00000544268 DGAT2L7PQ6IED9 249 aa10.55□□□□□ -0.72
CHFR-223ENST00000544268 COPS9Q8WXC6 57 aa10.55□□□□□ -0.72
CHFR-223ENST00000544268 LINC00242Q5T6M2 205 aa10.54□□□□□ -0.72
CHFR-223ENST00000544268 Q6JHZ5 121 aa10.54□□□□□ -0.72
CHFR-223ENST00000544268 K7EQD1 137 aa10.53□□□□□ -0.72
CHFR-223ENST00000544268 CSNK1G2-AS1Q8NCQ2 148 aa10.53□□□□□ -0.72
CHFR-223ENST00000544268 FAM218AQ96MZ4 157 aa10.52□□□□□ -0.73
CHFR-223ENST00000544268 TRGV2A0A075B6R0 118 aa10.5□□□□□ -0.73
CHFR-223ENST00000544268 IGKV3OR2-268A0A0C4DH90 116 aa10.5□□□□□ -0.73
CHFR-223ENST00000544268 DNAL4O96015 105 aa10.5□□□□□ -0.73
CHFR-223ENST00000544268 OXLD1Q5BKU9 147 aa10.5□□□□□ -0.73
CHFR-223ENST00000544268 IGKV3D-7A0A0C4DH55 119 aa10.5□□□□□ -0.73
CHFR-223ENST00000544268 RPL36AP83881 106 aaKnown RBP10.5□□□□□ -0.73
CHFR-223ENST00000544268 RPL36ALQ969Q0 106 aaKnown RBP10.5□□□□□ -0.73
CHFR-223ENST00000544268 Q9H8V8 135 aa10.5□□□□□ -0.73
CHFR-223ENST00000544268 IGLV5-45A0A087WSX0 123 aa10.49□□□□□ -0.73
CHFR-223ENST00000544268 USP17L23D6RBM5 183 aa10.49□□□□□ -0.73
CHFR-223ENST00000544268 SOSTDC1Q6X4U4 206 aa10.49□□□□□ -0.73
CHFR-223ENST00000544268 C6orf226Q5I0X4 101 aa10.49□□□□□ -0.73
CHFR-223ENST00000544268 LINC01561Q8N1V8 128 aa10.48□□□□□ -0.73
CHFR-223ENST00000544268 ANK2Q01484 3957 aa10.48□□□□□ -0.73
CHFR-223ENST00000544268 SMIM1B2RUZ4 78 aa10.48□□□□□ -0.73
CHFR-223ENST00000544268 EPM2AB3EWF7 344 aa10.48□□□□□ -0.73
CHFR-223ENST00000544268 Q9HAA7 133 aa10.48□□□□□ -0.73
CHFR-223ENST00000544268 CDC42SE2Q9NRR3 84 aa10.47□□□□□ -0.73
CHFR-223ENST00000544268 NDUFC2-KCTD14E9PQ53 114 aa10.47□□□□□ -0.73
CHFR-223ENST00000544268 LINC00846Q9NV44 126 aa10.47□□□□□ -0.73
CHFR-223ENST00000544268 A0A087WVE0 104 aa10.46□□□□□ -0.73
CHFR-223ENST00000544268 IGLV5-39A0A0G2JS06 123 aa10.46□□□□□ -0.73
CHFR-223ENST00000544268 OVOL2Q9BRP0 275 aa10.46□□□□□ -0.73
CHFR-223ENST00000544268 RPL28P46779 137 aaKnown RBP10.46□□□□□ -0.74
CHFR-223ENST00000544268 KRTAP10-11P60412 298 aa10.45□□□□□ -0.74
CHFR-223ENST00000544268 OBSCN-AS1Q96MR7 158 aa10.45□□□□□ -0.74
CHFR-223ENST00000544268 NDUFC2O95298 119 aa10.45□□□□□ -0.74
CHFR-223ENST00000544268 IGLV4-60A0A075B6I1 120 aa10.44□□□□□ -0.74
CHFR-223ENST00000544268 DEFB130BP0DP73 79 aa10.44□□□□□ -0.74
CHFR-223ENST00000544268 DEFB130AP0DP74 79 aa10.44□□□□□ -0.74
CHFR-223ENST00000544268 C16orf74Q96GX8 76 aa10.44□□□□□ -0.74
CHFR-223ENST00000544268 C14orf132Q9NPU4 83 aa10.44□□□□□ -0.74
CHFR-223ENST00000544268 TRBV10-1A0A0K0K1A3 114 aa10.44□□□□□ -0.74
CHFR-223ENST00000544268 A0A0U1RQV1 116 aa10.44□□□□□ -0.74
CHFR-223ENST00000544268 TRAV13-2A0A0B4J235 113 aa10.43□□□□□ -0.74
CHFR-223ENST00000544268 TRGV4A0A0C4DH28 118 aa10.43□□□□□ -0.74
CHFR-223ENST00000544268 FHL2Q14192 279 aa10.43□□□□□ -0.74
CHFR-223ENST00000544268 IGHV4-30-4P0DP06 118 aa10.43□□□□□ -0.74
CHFR-223ENST00000544268 FAM19A1Q7Z5A9 133 aa10.43□□□□□ -0.74
CHFR-223ENST00000544268 UBE2L6O14933 153 aa10.42□□□□□ -0.74
CHFR-223ENST00000544268 C9orf129Q5T035 196 aaKnown RBP10.42□□□□□ -0.74
CHFR-223ENST00000544268 TMEM243Q9BU79 118 aa10.42□□□□□ -0.74
CHFR-223ENST00000544268 A0A096LPF7 62 aa10.41□□□□□ -0.74
CHFR-223ENST00000544268 EGFEM1PQ0D2K5 195 aa10.41□□□□□ -0.74
CHFR-223ENST00000544268 DEFB135Q30KP9 77 aa10.41□□□□□ -0.74
CHFR-223ENST00000544268 APOC4P55056 127 aa10.41□□□□□ -0.74
CHFR-223ENST00000544268 X6R8D5 127 aa10.41□□□□□ -0.74
CHFR-223ENST00000544268 DNAH3Q8TD57 4116 aa10.4□□□□□ -0.74
CHFR-223ENST00000544268 NOTCH1P46531 2555 aa10.4□□□□□ -0.74
CHFR-223ENST00000544268 DEFB4AO15263 64 aa10.39□□□□□ -0.75
CHFR-223ENST00000544268 MDFIQ99750 246 aa10.39□□□□□ -0.75
CHFR-223ENST00000544268 TOMM7Q9P0U1 55 aa10.39□□□□□ -0.75
CHFR-223ENST00000544268 CRPP02741 224 aa10.38□□□□□ -0.75
CHFR-223ENST00000544268 A0A087WYN8 130 aa10.38□□□□□ -0.75
CHFR-223ENST00000544268 H0YGX0 51 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 1047 ms