RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 CARD19Q96LW7 228 aa13.43□□□□□ -0.26
OTUB1-211ENST00000543004 STPG4Q8N801 248 aa13.42□□□□□ -0.26
OTUB1-211ENST00000543004 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.42□□□□□ -0.26
OTUB1-211ENST00000543004 C20orf202A1L168 122 aa13.42□□□□□ -0.26
OTUB1-211ENST00000543004 GCSHP23434 173 aa13.42□□□□□ -0.26
OTUB1-211ENST00000543004 KRTAP10-1P60331 282 aa13.42□□□□□ -0.26
OTUB1-211ENST00000543004 NDUFA1O15239 70 aa13.41□□□□□ -0.26
OTUB1-211ENST00000543004 CKS1BP61024 79 aa13.41□□□□□ -0.26
OTUB1-211ENST00000543004 C6orf48Q9UBA6 75 aa13.41□□□□□ -0.26
OTUB1-211ENST00000543004 TSPEAR-AS2P59090 65 aa13.39□□□□□ -0.27
OTUB1-211ENST00000543004 C9orf116Q5BN46 136 aaPredicted RBP13.39□□□□□ -0.27
OTUB1-211ENST00000543004 DNAH8Q96JB1 4490 aa13.38□□□□□ -0.27
OTUB1-211ENST00000543004 SCGB1D1O95968 90 aa13.37□□□□□ -0.27
OTUB1-211ENST00000543004 MAJINQ3KP22 176 aa13.37□□□□□ -0.27
OTUB1-211ENST00000543004 SDIM1Q6ZPB5 146 aa13.37□□□□□ -0.27
OTUB1-211ENST00000543004 HERVK_113P61574 105 aa13.36□□□□□ -0.27
OTUB1-211ENST00000543004 F8WDY8 70 aa13.35□□□□□ -0.27
OTUB1-211ENST00000543004 LEPROTO15243 131 aa13.35□□□□□ -0.27
OTUB1-211ENST00000543004 CXCL5P42830 114 aa13.35□□□□□ -0.27
OTUB1-211ENST00000543004 ZNF625Q96I27 306 aaPredicted RBP13.35□□□□□ -0.27
OTUB1-211ENST00000543004 FAM30AQ9NZY2 134 aa13.35□□□□□ -0.27
OTUB1-211ENST00000543004 IGKV2D-26A0A0A0MRZ7 120 aa13.34□□□□□ -0.27
OTUB1-211ENST00000543004 E9PLD3 99 aa13.34□□□□□ -0.27
OTUB1-211ENST00000543004 PANO1I0J062 215 aa13.34□□□□□ -0.27
OTUB1-211ENST00000543004 CHTF8P0CG12 524 aa13.33□□□□□ -0.28
OTUB1-211ENST00000543004 ANKRD39Q53RE8 183 aa13.33□□□□□ -0.28
OTUB1-211ENST00000543004 TRBV30A0A0K0K1B3 111 aa13.32□□□□□ -0.28
OTUB1-211ENST00000543004 J3QQQ9 107 aa13.32□□□□□ -0.28
OTUB1-211ENST00000543004 APOBP04114 4563 aaKnown RBP13.32□□□□□ -0.28
OTUB1-211ENST00000543004 RNF151Q2KHN1 245 aa13.31□□□□□ -0.28
OTUB1-211ENST00000543004 PLEKHB2Q96CS7 222 aa13.31□□□□□ -0.28
OTUB1-211ENST00000543004 A0A096LNI7 61 aa13.31□□□□□ -0.28
OTUB1-211ENST00000543004 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.31□□□□□ -0.28
OTUB1-211ENST00000543004 IGKV2-24A0A0C4DH68 120 aa13.3□□□□□ -0.28
OTUB1-211ENST00000543004 HAMPP81172 84 aa13.3□□□□□ -0.28
OTUB1-211ENST00000543004 TTTY13Q9BZ97 58 aa13.3□□□□□ -0.28
OTUB1-211ENST00000543004 NDUFA12Q9UI09 145 aa13.3□□□□□ -0.28
OTUB1-211ENST00000543004 RPL18AQ02543 176 aaKnown RBP13.29□□□□□ -0.28
OTUB1-211ENST00000543004 JOSD1Q15040 202 aaPredicted RBP13.29□□□□□ -0.28
OTUB1-211ENST00000543004 Q6ZRP5 223 aa13.29□□□□□ -0.28
OTUB1-211ENST00000543004 LOC107984640A0A0U1RRK4 108 aa13.28□□□□□ -0.28
OTUB1-211ENST00000543004 LGALS3P17931 250 aaKnown RBP13.28□□□□□ -0.28
OTUB1-211ENST00000543004 GAGE2BQ13066 116 aa13.28□□□□□ -0.28
OTUB1-211ENST00000543004 BIRC6Q9NR09 4857 aa13.28□□□□□ -0.28
OTUB1-211ENST00000543004 AKR1D1P51857 326 aa13.28□□□□□ -0.28
OTUB1-211ENST00000543004 PYY3Q5JQD4 70 aa13.27□□□□□ -0.29
OTUB1-211ENST00000543004 TLX1NBP0CAT3 122 aa13.26□□□□□ -0.29
OTUB1-211ENST00000543004 PFN2P35080 140 aa13.26□□□□□ -0.29
OTUB1-211ENST00000543004 GAGE2EQ4V326 116 aa13.26□□□□□ -0.29
OTUB1-211ENST00000543004 Q6ZSA8 131 aa13.26□□□□□ -0.29
OTUB1-211ENST00000543004 GAGE2DQ9UEU5 116 aa13.26□□□□□ -0.29
OTUB1-211ENST00000543004 NDUFC2-KCTD14E9PQ53 114 aa13.25□□□□□ -0.29
OTUB1-211ENST00000543004 NMUP48645 174 aa13.25□□□□□ -0.29
OTUB1-211ENST00000543004 ERG28Q9UKR5 140 aa13.25□□□□□ -0.29
OTUB1-211ENST00000543004 KIAA1109Q2LD37 5005 aa13.24□□□□□ -0.29
OTUB1-211ENST00000543004 A0A0U1RRA0 63 aa13.24□□□□□ -0.29
OTUB1-211ENST00000543004 MYMXA0A1B0GTQ4 84 aa13.24□□□□□ -0.29
OTUB1-211ENST00000543004 PTTG1IPP53801 180 aa13.24□□□□□ -0.29
OTUB1-211ENST00000543004 SPACA4Q8TDM5 124 aa13.23□□□□□ -0.29
OTUB1-211ENST00000543004 SFTA2Q6UW10 78 aa13.22□□□□□ -0.29
OTUB1-211ENST00000543004 PCP2Q8IVA1 136 aa13.22□□□□□ -0.29
OTUB1-211ENST00000543004 SMIM13P0DJ93 91 aa13.21□□□□□ -0.29
OTUB1-211ENST00000543004 XGP55808 180 aa13.21□□□□□ -0.29
OTUB1-211ENST00000543004 CIRBPQ14011 172 aaKnown RBP13.21□□□□□ -0.29
OTUB1-211ENST00000543004 XAGE1AQ9HD64 81 aa13.21□□□□□ -0.29
OTUB1-211ENST00000543004 ZNF815PA8K554 130 aa13.21□□□□□ -0.3
OTUB1-211ENST00000543004 HSBP1L1C9JCN9 74 aa13.21□□□□□ -0.3
OTUB1-211ENST00000543004 HERV-K104P63124 156 aa13.21□□□□□ -0.3
OTUB1-211ENST00000543004 MEIG1Q5JSS6 88 aa13.21□□□□□ -0.3
OTUB1-211ENST00000543004 C9orf129Q5T035 196 aaKnown RBP13.2□□□□□ -0.3
OTUB1-211ENST00000543004 SCXQ7RTU7 201 aa13.2□□□□□ -0.3
OTUB1-211ENST00000543004 DPH3Q96FX2 82 aa13.2□□□□□ -0.3
OTUB1-211ENST00000543004 RYR1P21817 5038 aa13.19□□□□□ -0.3
OTUB1-211ENST00000543004 A0A0J9YXY3 114 aa13.19□□□□□ -0.3
OTUB1-211ENST00000543004 LINC00158P58513 81 aa13.19□□□□□ -0.3
OTUB1-211ENST00000543004 FAM168BA1KXE4 195 aa13.18□□□□□ -0.3
OTUB1-211ENST00000543004 CIRBP-AS1Q8TBR5 109 aa13.18□□□□□ -0.3
OTUB1-211ENST00000543004 TP73-AS1Q9UF72 201 aa13.18□□□□□ -0.3
OTUB1-211ENST00000543004 PKIGQ9Y2B9 76 aa13.18□□□□□ -0.3
OTUB1-211ENST00000543004 PAM16Q9Y3D7 125 aa13.18□□□□□ -0.3
OTUB1-211ENST00000543004 A0A087WYN8 130 aa13.17□□□□□ -0.3
OTUB1-211ENST00000543004 LOC105371267A0A1B0GV96 52 aa13.17□□□□□ -0.3
OTUB1-211ENST00000543004 HSPG2P98160 4391 aa13.17□□□□□ -0.3
OTUB1-211ENST00000543004 A0A1W2PNN7 141 aa13.17□□□□□ -0.3
OTUB1-211ENST00000543004 COX17Q14061 63 aa13.17□□□□□ -0.3
OTUB1-211ENST00000543004 DAND5Q8N907 189 aa13.17□□□□□ -0.3
OTUB1-211ENST00000543004 VAMP8Q9BV40 100 aa13.16□□□□□ -0.3
OTUB1-211ENST00000543004 SND1-IT1Q9HBX3 110 aa13.15□□□□□ -0.3
OTUB1-211ENST00000543004 LINC00474Q9P2X8 69 aa13.15□□□□□ -0.3
OTUB1-211ENST00000543004 SPATA45Q537H7 98 aa13.14□□□□□ -0.31
OTUB1-211ENST00000543004 KRTAP7-1Q8IUC3 87 aa13.14□□□□□ -0.31
OTUB1-211ENST00000543004 MIR7-3HGQ8N6C7 128 aa13.14□□□□□ -0.31
OTUB1-211ENST00000543004 ADAMTSL4-AS1Q5T5F5 129 aa13.13□□□□□ -0.31
OTUB1-211ENST00000543004 CDK2AP2O75956 126 aa13.13□□□□□ -0.31
OTUB1-211ENST00000543004 LITAFQ99732 161 aa13.12□□□□□ -0.31
OTUB1-211ENST00000543004 PLAC8Q9NZF1 115 aa13.12□□□□□ -0.31
OTUB1-211ENST00000543004 SERTAD4-AS1Q5TG53 156 aa13.11□□□□□ -0.31
OTUB1-211ENST00000543004 FAM19A5Q7Z5A7 132 aaPredicted RBP13.11□□□□□ -0.31
OTUB1-211ENST00000543004 C14orf144Q96I85 54 aa13.1□□□□□ -0.31
OTUB1-211ENST00000543004 LINC00587B1AMM8 73 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms