RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 COX7CP15954 63 aa10.36□□□□□ -0.75
DDX55-209ENST00000542286 SDIM1Q6ZPB5 146 aa10.36□□□□□ -0.75
DDX55-209ENST00000542286 C5orf38Q86SI9 138 aa10.36□□□□□ -0.75
DDX55-209ENST00000542286 PRIMA1Q86XR5 153 aa10.36□□□□□ -0.75
DDX55-209ENST00000542286 STAB1Q9NY15 2570 aa10.36□□□□□ -0.75
DDX55-209ENST00000542286 F5H768 121 aa10.35□□□□□ -0.75
DDX55-209ENST00000542286 J3KT08 172 aa10.35□□□□□ -0.75
DDX55-209ENST00000542286 NDUFA1O15239 70 aa10.35□□□□□ -0.75
DDX55-209ENST00000542286 CIRBPQ14011 172 aaKnown RBP10.35□□□□□ -0.75
DDX55-209ENST00000542286 FAM19A5Q7Z5A7 132 aaPredicted RBP10.35□□□□□ -0.75
DDX55-209ENST00000542286 LINC00308Q8TCZ7 52 aa10.35□□□□□ -0.75
DDX55-209ENST00000542286 C11orf68Q9H3H3 251 aaKnown RBP10.35□□□□□ -0.75
DDX55-209ENST00000542286 F8P00451 2351 aa10.35□□□□□ -0.75
DDX55-209ENST00000542286 IGLV5-39A0A0G2JS06 123 aa10.35□□□□□ -0.75
DDX55-209ENST00000542286 C5orf47Q569G3 176 aa10.34□□□□□ -0.75
DDX55-209ENST00000542286 CXCL5P42830 114 aa10.34□□□□□ -0.75
DDX55-209ENST00000542286 GAGE2AQ6NT46 116 aa10.34□□□□□ -0.75
DDX55-209ENST00000542286 Q8N3U1 123 aa10.34□□□□□ -0.75
DDX55-209ENST00000542286 DEFB135Q30KP9 77 aa10.33□□□□□ -0.76
DDX55-209ENST00000542286 C2orf48Q96LS8 159 aa10.33□□□□□ -0.76
DDX55-209ENST00000542286 OVOL2Q9BRP0 275 aa10.33□□□□□ -0.76
DDX55-209ENST00000542286 A0A1B0GX51 115 aa10.32□□□□□ -0.76
DDX55-209ENST00000542286 SMIM9A6NGZ8 99 aa10.32□□□□□ -0.76
DDX55-209ENST00000542286 C22orf24Q9Y442 160 aa10.32□□□□□ -0.76
DDX55-209ENST00000542286 TRBV6-4A0A1B0GX49 114 aa10.32□□□□□ -0.76
DDX55-209ENST00000542286 GYPEP15421 78 aa10.31□□□□□ -0.76
DDX55-209ENST00000542286 X6R8D5 127 aa10.31□□□□□ -0.76
DDX55-209ENST00000542286 ANK2Q01484 3957 aa10.31□□□□□ -0.76
DDX55-209ENST00000542286 TRBV6-8A0A0A6YYG3 113 aa10.31□□□□□ -0.76
DDX55-209ENST00000542286 TRACP01848 142 aa10.31□□□□□ -0.76
DDX55-209ENST00000542286 CRYGAP11844 174 aa10.31□□□□□ -0.76
DDX55-209ENST00000542286 hADV29S1A0JD25 119 aa10.31□□□□□ -0.76
DDX55-209ENST00000542286 FAM218AQ96MZ4 157 aa10.3□□□□□ -0.76
DDX55-209ENST00000542286 CMC4P56277 68 aaPredicted RBP10.29□□□□□ -0.76
DDX55-209ENST00000542286 FAM222AQ5U5X8 452 aa10.29□□□□□ -0.76
DDX55-209ENST00000542286 FBN1P35555 2871 aaKnown RBP10.29□□□□□ -0.76
DDX55-209ENST00000542286 ATOX1O00244 68 aa10.28□□□□□ -0.76
DDX55-209ENST00000542286 INAFM2P0DMQ5 153 aa10.28□□□□□ -0.76
DDX55-209ENST00000542286 CYSTM1Q9H1C7 97 aa10.28□□□□□ -0.76
DDX55-209ENST00000542286 NOTCH1P46531 2555 aa10.28□□□□□ -0.76
DDX55-209ENST00000542286 HIST1H4AP62805 103 aaKnown RBP10.28□□□□□ -0.76
DDX55-209ENST00000542286 Q9HAA7 133 aa10.28□□□□□ -0.76
DDX55-209ENST00000542286 MAST4O15021 2626 aa10.28□□□□□ -0.76
DDX55-209ENST00000542286 XCL1P47992 114 aa10.27□□□□□ -0.76
DDX55-209ENST00000542286 RPS28P62857 69 aaKnown RBP10.27□□□□□ -0.76
DDX55-209ENST00000542286 TENM3Q9P273 2699 aa10.27□□□□□ -0.77
DDX55-209ENST00000542286 PFN2P35080 140 aa10.26□□□□□ -0.77
DDX55-209ENST00000542286 HTN3P15516 51 aa10.25□□□□□ -0.77
DDX55-209ENST00000542286 MALP21145 153 aa10.25□□□□□ -0.77
DDX55-209ENST00000542286 MIR7-3HGQ8N6C7 128 aa10.25□□□□□ -0.77
DDX55-209ENST00000542286 COPS9Q8WXC6 57 aa10.25□□□□□ -0.77
DDX55-209ENST00000542286 IGLV10-54A0A075B6I4 117 aa10.25□□□□□ -0.77
DDX55-209ENST00000542286 FAM19A3Q7Z5A8 133 aa10.25□□□□□ -0.77
DDX55-209ENST00000542286 COX7B2Q8TF08 81 aa10.25□□□□□ -0.77
DDX55-209ENST00000542286 CELA1Q9UNI1 258 aa10.25□□□□□ -0.77
DDX55-209ENST00000542286 OR13C6PQ8NH95 151 aa10.24□□□□□ -0.77
DDX55-209ENST00000542286 IGHV3OR16-9A0A0B4J2B5 98 aa10.24□□□□□ -0.77
DDX55-209ENST00000542286 RPL18AQ02543 176 aaKnown RBP10.24□□□□□ -0.77
DDX55-209ENST00000542286 KIR2DL5BQ8NHK3 375 aa10.23□□□□□ -0.77
DDX55-209ENST00000542286 IGKV3D-7A0A0C4DH55 119 aa10.23□□□□□ -0.77
DDX55-209ENST00000542286 LINC00158P58513 81 aa10.23□□□□□ -0.77
DDX55-209ENST00000542286 LINC00959A0A1B0GUT2 108 aa10.22□□□□□ -0.77
DDX55-209ENST00000542286 DNAL4O96015 105 aa10.22□□□□□ -0.77
DDX55-209ENST00000542286 IGHV4-28A0A0C4DH34 117 aa10.21□□□□□ -0.77
DDX55-209ENST00000542286 DPH3Q96FX2 82 aa10.21□□□□□ -0.77
DDX55-209ENST00000542286 C9orf129Q5T035 196 aaKnown RBP10.21□□□□□ -0.78
DDX55-209ENST00000542286 PAX4O43316 350 aa10.2□□□□□ -0.78
DDX55-209ENST00000542286 C14orf132Q9NPU4 83 aa10.2□□□□□ -0.78
DDX55-209ENST00000542286 LINC00337Q8N6G1 96 aa10.2□□□□□ -0.78
DDX55-209ENST00000542286 A0A087WVE0 104 aa10.2□□□□□ -0.78
DDX55-209ENST00000542286 TMEM258P61165 79 aa10.19□□□□□ -0.78
DDX55-209ENST00000542286 LINC00269Q8N2A0 174 aa10.19□□□□□ -0.78
DDX55-209ENST00000542286 SERP2Q8N6R1 65 aa10.19□□□□□ -0.78
DDX55-209ENST00000542286 LINC00612Q8N6U2 182 aa10.19□□□□□ -0.78
DDX55-209ENST00000542286 LINC00846Q9NV44 126 aa10.19□□□□□ -0.78
DDX55-209ENST00000542286 PRO0255Q9UI72 69 aa10.19□□□□□ -0.78
DDX55-209ENST00000542286 IGKV2-28A0A075B6P5 120 aa10.18□□□□□ -0.78
DDX55-209ENST00000542286 IGKV2D-28P01615 120 aa10.18□□□□□ -0.78
DDX55-209ENST00000542286 RPL28P46779 137 aaKnown RBP10.18□□□□□ -0.78
DDX55-209ENST00000542286 C9orf66Q5T8R8 295 aa10.18□□□□□ -0.78
DDX55-209ENST00000542286 DSCR8Q96T75 97 aa10.18□□□□□ -0.78
DDX55-209ENST00000542286 UPK3BQ9BT76 320 aa10.17□□□□□ -0.78
DDX55-209ENST00000542286 A0A087WYN8 130 aa10.17□□□□□ -0.78
DDX55-209ENST00000542286 TRAV13-2A0A0B4J235 113 aa10.17□□□□□ -0.78
DDX55-209ENST00000542286 SND1-IT1Q9HBX3 110 aa10.17□□□□□ -0.78
DDX55-209ENST00000542286 A0A087WZ39 114 aa10.16□□□□□ -0.78
DDX55-209ENST00000542286 CCL18P55774 89 aa10.16□□□□□ -0.78
DDX55-209ENST00000542286 PRR3P79522 188 aaKnown RBP10.16□□□□□ -0.78
DDX55-209ENST00000542286 Q6JHZ5 121 aa10.16□□□□□ -0.78
DDX55-209ENST00000542286 OXTP01178 125 aa10.16□□□□□ -0.78
DDX55-209ENST00000542286 CRPP02741 224 aa10.16□□□□□ -0.78
DDX55-209ENST00000542286 C6orf226Q5I0X4 101 aa10.16□□□□□ -0.78
DDX55-209ENST00000542286 LINC01561Q8N1V8 128 aa10.16□□□□□ -0.78
DDX55-209ENST00000542286 DAD1P61803 113 aa10.15□□□□□ -0.78
DDX55-209ENST00000542286 C9orf116Q5BN46 136 aaPredicted RBP10.15□□□□□ -0.78
DDX55-209ENST00000542286 RETNQ9HD89 108 aa10.15□□□□□ -0.78
DDX55-209ENST00000542286 USP17L23D6RBM5 183 aa10.15□□□□□ -0.78
DDX55-209ENST00000542286 WIPF1O43516 503 aa10.15□□□□□ -0.78
DDX55-209ENST00000542286 OXLD1Q5BKU9 147 aa10.15□□□□□ -0.78
DDX55-209ENST00000542286 COL6A5A8TX70 2615 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms