RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 PLA2G2AP14555 144 aa3.48□□□□□ -1.85
SNHG1-218ENST00000541615 COX6A2Q02221 97 aa3.48□□□□□ -1.85
SNHG1-218ENST00000541615 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
SNHG1-218ENST00000541615 SMIM29Q86T20 159 aa3.48□□□□□ -1.85
SNHG1-218ENST00000541615 IGHV3OR16-8A0A075B7F1 116 aa3.47□□□□□ -1.85
SNHG1-218ENST00000541615 ATP6V0E1O15342 81 aa3.47□□□□□ -1.85
SNHG1-218ENST00000541615 IGHV1-2P23083 117 aa3.47□□□□□ -1.85
SNHG1-218ENST00000541615 ZFP36P26651 326 aaKnown RBP3.47□□□□□ -1.85
SNHG1-218ENST00000541615 SEC61BP60468 96 aaKnown RBP3.47□□□□□ -1.85
SNHG1-218ENST00000541615 C10orf25Q5T742 122 aa3.47□□□□□ -1.85
SNHG1-218ENST00000541615 KPRPQ5T749 579 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-218ENST00000541615 C1orf134Q5TEV5 83 aa3.47□□□□□ -1.85
SNHG1-218ENST00000541615 COA5Q86WW8 74 aa3.47□□□□□ -1.85
SNHG1-218ENST00000541615 LINC01006Q8NI28 216 aa3.47□□□□□ -1.85
SNHG1-218ENST00000541615 TRANK1O15050 2925 aa3.47□□□□□ -1.85
SNHG1-218ENST00000541615 PRRC2BQ5JSZ5 2229 aaKnown RBP3.46□□□□□ -1.86
SNHG1-218ENST00000541615 TRGV4A0A0C4DH28 118 aa3.46□□□□□ -1.86
SNHG1-218ENST00000541615 PINLYPA6NC86 204 aa3.46□□□□□ -1.86
SNHG1-218ENST00000541615 CDK2AP2O75956 126 aa3.46□□□□□ -1.86
SNHG1-218ENST00000541615 IGHV3-23P01764 117 aa3.46□□□□□ -1.86
SNHG1-218ENST00000541615 CCL3L1P16619 93 aa3.46□□□□□ -1.86
SNHG1-218ENST00000541615 ROMO1P60602 79 aa3.46□□□□□ -1.86
SNHG1-218ENST00000541615 MINOS1Q5TGZ0 78 aa3.46□□□□□ -1.86
SNHG1-218ENST00000541615 DEFB108BQ8NET1 73 aa3.46□□□□□ -1.86
SNHG1-218ENST00000541615 PRAC1Q96KF2 57 aa3.46□□□□□ -1.86
SNHG1-218ENST00000541615 ZNRD1Q9P1U0 126 aa3.46□□□□□ -1.86
SNHG1-218ENST00000541615 DPM3Q9P2X0 92 aa3.46□□□□□ -1.86
SNHG1-218ENST00000541615 SDK2Q58EX2 2172 aa3.46□□□□□ -1.86
SNHG1-218ENST00000541615 COL27A1Q8IZC6 1860 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-218ENST00000541615 ZFHX3Q15911 3703 aa3.45□□□□□ -1.86
SNHG1-218ENST00000541615 MALRD1Q5VYJ5 2156 aa3.45□□□□□ -1.86
SNHG1-218ENST00000541615 A0A096LNT2 108 aa3.45□□□□□ -1.86
SNHG1-218ENST00000541615 MSMBP08118 114 aa3.45□□□□□ -1.86
SNHG1-218ENST00000541615 IGHV4-30-4P0DP06 118 aa3.45□□□□□ -1.86
SNHG1-218ENST00000541615 DEFB112Q30KQ8 113 aa3.45□□□□□ -1.86
SNHG1-218ENST00000541615 Q8IZM0 81 aa3.45□□□□□ -1.86
SNHG1-218ENST00000541615 Q8NAQ8 132 aa3.45□□□□□ -1.86
SNHG1-218ENST00000541615 BRWD1Q9NSI6 2320 aa3.45□□□□□ -1.86
SNHG1-218ENST00000541615 LY6G6EA0A0G2JKS1 128 aa3.44□□□□□ -1.86
SNHG1-218ENST00000541615 ODF3L2Q3SX64 289 aa3.44□□□□□ -1.86
SNHG1-218ENST00000541615 Q6ZQY7 126 aa3.44□□□□□ -1.86
SNHG1-218ENST00000541615 PTPRZ1P23471 2315 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-218ENST00000541615 CNTRLQ7Z7A1 2325 aa3.43□□□□□ -1.86
SNHG1-218ENST00000541615 PLXNB1O43157 2135 aa3.43□□□□□ -1.86
SNHG1-218ENST00000541615 NAV3Q8IVL0 2385 aa3.43□□□□□ -1.86
SNHG1-218ENST00000541615 IGHV4-61A0A0C4DH41 118 aa3.43□□□□□ -1.86
SNHG1-218ENST00000541615 KRTAP16-1A8MUX0 517 aa3.43□□□□□ -1.86
SNHG1-218ENST00000541615 SPATA8Q6RVD6 105 aa3.43□□□□□ -1.86
SNHG1-218ENST00000541615 CNEP1R1Q8N9A8 125 aa3.43□□□□□ -1.86
SNHG1-218ENST00000541615 C9orf163Q8N9P6 203 aa3.43□□□□□ -1.86
SNHG1-218ENST00000541615 TOMM7Q9P0U1 55 aa3.43□□□□□ -1.86
SNHG1-218ENST00000541615 PRR14LQ5THK1 2151 aa3.43□□□□□ -1.86
SNHG1-218ENST00000541615 CACNA1AO00555 2505 aa3.43□□□□□ -1.86
SNHG1-218ENST00000541615 REV3LO60673 3130 aa3.43□□□□□ -1.86
SNHG1-218ENST00000541615 WDFY4Q6ZS81 3184 aa3.43□□□□□ -1.86
SNHG1-218ENST00000541615 IGHV4-28A0A0C4DH34 117 aa3.42□□□□□ -1.86
SNHG1-218ENST00000541615 A0A1W2PNM2 257 aa3.42□□□□□ -1.86
SNHG1-218ENST00000541615 B4DSR2 109 aa3.42□□□□□ -1.86
SNHG1-218ENST00000541615 H3BUA1 57 aa3.42□□□□□ -1.86
SNHG1-218ENST00000541615 M0R2N4 97 aa3.42□□□□□ -1.86
SNHG1-218ENST00000541615 IGLV6-57P01721 117 aa3.42□□□□□ -1.86
SNHG1-218ENST00000541615 IGHV3-11P01762 117 aa3.42□□□□□ -1.86
SNHG1-218ENST00000541615 TFF2Q03403 129 aa3.42□□□□□ -1.86
SNHG1-218ENST00000541615 PRR4Q16378 134 aa3.42□□□□□ -1.86
SNHG1-218ENST00000541615 DEFB104AQ8WTQ1 72 aa3.42□□□□□ -1.86
SNHG1-218ENST00000541615 TTTY12Q9BZ98 90 aa3.42□□□□□ -1.86
SNHG1-218ENST00000541615 MINOS1-NBL1R4GNA1 71 aa3.42□□□□□ -1.86
SNHG1-218ENST00000541615 ZDBF2Q9HCK1 2354 aa3.42□□□□□ -1.86
SNHG1-218ENST00000541615 SPTBN4Q9H254 2564 aa3.42□□□□□ -1.86
SNHG1-218ENST00000541615 CFAP54Q96N23 3096 aa3.41□□□□□ -1.86
SNHG1-218ENST00000541615 DOCK10Q96BY6 2186 aa3.41□□□□□ -1.86
SNHG1-218ENST00000541615 CHD9Q3L8U1 2897 aa3.41□□□□□ -1.86
SNHG1-218ENST00000541615 SPINK7P58062 85 aa3.41□□□□□ -1.86
SNHG1-218ENST00000541615 MIR22HGQ0VDD5 57 aa3.41□□□□□ -1.86
SNHG1-218ENST00000541615 DEFB133Q30KQ1 61 aa3.41□□□□□ -1.86
SNHG1-218ENST00000541615 REG3GQ6UW15 175 aa3.41□□□□□ -1.86
SNHG1-218ENST00000541615 LINC00612Q8N6U2 182 aa3.41□□□□□ -1.86
SNHG1-218ENST00000541615 Q8N9L7 120 aa3.41□□□□□ -1.86
SNHG1-218ENST00000541615 USMG5Q96IX5 58 aa3.41□□□□□ -1.86
SNHG1-218ENST00000541615 F5P12259 2224 aa3.41□□□□□ -1.86
SNHG1-218ENST00000541615 TRIOO75962 3097 aa3.41□□□□□ -1.86
SNHG1-218ENST00000541615 CDH23Q9H251 3354 aa3.41□□□□□ -1.86
SNHG1-218ENST00000541615 XIRP2A4UGR9 3374 aa3.4□□□□□ -1.86
SNHG1-218ENST00000541615 A0A087WSZ3 146 aa3.4□□□□□ -1.87
SNHG1-218ENST00000541615 DEFB131BA0A096LNP1 70 aa3.4□□□□□ -1.87
SNHG1-218ENST00000541615 ODF3BA8MYP8 253 aa3.4□□□□□ -1.87
SNHG1-218ENST00000541615 UQCR11O14957 56 aa3.4□□□□□ -1.87
SNHG1-218ENST00000541615 SEC16AO15027 2179 aa3.4□□□□□ -1.87
SNHG1-218ENST00000541615 SLURP1P55000 103 aa3.4□□□□□ -1.87
SNHG1-218ENST00000541615 DSCR9P59020 149 aa3.4□□□□□ -1.87
SNHG1-218ENST00000541615 CSAG1Q6PB30 78 aa3.4□□□□□ -1.87
SNHG1-218ENST00000541615 ST20-AS1Q8NBB2 130 aa3.4□□□□□ -1.87
SNHG1-218ENST00000541615 DNAJC13O75165 2243 aa3.4□□□□□ -1.87
SNHG1-218ENST00000541615 CHD7Q9P2D1 2997 aa3.39□□□□□ -1.87
SNHG1-218ENST00000541615 USP34Q70CQ2 3546 aa3.39□□□□□ -1.87
SNHG1-218ENST00000541615 CADP27708 2225 aa3.39□□□□□ -1.87
SNHG1-218ENST00000541615 ZNF318Q5VUA4 2279 aa3.39□□□□□ -1.87
SNHG1-218ENST00000541615 IGLV5-48A0A075B6I7 105 aa3.39□□□□□ -1.87
SNHG1-218ENST00000541615 K7ERS5 55 aa3.39□□□□□ -1.87
SNHG1-218ENST00000541615 PRB3Q04118 309 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms