RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PRSS2P07478 247 aa18.49■□□□□ 0.55
CCM2-218ENST00000541586 SRSF9Q13242 221 aaKnown RBP eCLIP18.49■□□□□ 0.55
CCM2-218ENST00000541586 C6orf226Q5I0X4 101 aa18.49■□□□□ 0.55
CCM2-218ENST00000541586 GCSHP23434 173 aa18.49■□□□□ 0.55
CCM2-218ENST00000541586 CEND1Q8N111 149 aa18.49■□□□□ 0.55
CCM2-218ENST00000541586 LITAFQ99732 161 aa18.49■□□□□ 0.55
CCM2-218ENST00000541586 DNAH2Q9P225 4427 aa18.48■□□□□ 0.55
CCM2-218ENST00000541586 APOMO95445 188 aa18.48■□□□□ 0.55
CCM2-218ENST00000541586 HERV-K104P63124 156 aa18.48■□□□□ 0.55
CCM2-218ENST00000541586 KIAA0087Q14695 138 aa18.48■□□□□ 0.55
CCM2-218ENST00000541586 RYR3Q15413 4870 aa18.48■□□□□ 0.55
CCM2-218ENST00000541586 TMEM238C9JI98 176 aa18.47■□□□□ 0.55
CCM2-218ENST00000541586 C1orf134Q5TEV5 83 aa18.46■□□□□ 0.55
CCM2-218ENST00000541586 TM2D2Q9BX73 214 aa18.46■□□□□ 0.55
CCM2-218ENST00000541586 TIMM17BO60830 172 aa18.44■□□□□ 0.54
CCM2-218ENST00000541586 FXYD2P54710 66 aa18.44■□□□□ 0.54
CCM2-218ENST00000541586 ADAMTSL4-AS1Q5T5F5 129 aa18.44■□□□□ 0.54
CCM2-218ENST00000541586 C6orf223Q8N319 242 aa18.44■□□□□ 0.54
CCM2-218ENST00000541586 DNAH10Q8IVF4 4471 aa18.43■□□□□ 0.54
CCM2-218ENST00000541586 LBHQ53QV2 105 aaPredicted RBP18.43■□□□□ 0.54
CCM2-218ENST00000541586 CFAP161Q6P656 301 aa18.43■□□□□ 0.54
CCM2-218ENST00000541586 SFTA2Q6UW10 78 aa18.43■□□□□ 0.54
CCM2-218ENST00000541586 SPAG11BQ08648 103 aa18.42■□□□□ 0.54
CCM2-218ENST00000541586 C2orf82Q6UX34 121 aa18.42■□□□□ 0.54
CCM2-218ENST00000541586 CKS1BP61024 79 aa18.41■□□□□ 0.54
CCM2-218ENST00000541586 CIRBPQ14011 172 aaKnown RBP18.41■□□□□ 0.54
CCM2-218ENST00000541586 MEIG1Q5JSS6 88 aa18.41■□□□□ 0.54
CCM2-218ENST00000541586 COL5A1-AS1Q5SY13 56 aa18.4■□□□□ 0.54
CCM2-218ENST00000541586 SPANXDQ9BXN6 97 aa18.4■□□□□ 0.54
CCM2-218ENST00000541586 SPANXCQ9NY87 97 aa18.4■□□□□ 0.54
CCM2-218ENST00000541586 CXCL5P42830 114 aa18.39■□□□□ 0.53
CCM2-218ENST00000541586 PTTG1IPP53801 180 aa18.39■□□□□ 0.53
CCM2-218ENST00000541586 RMI2Q96E14 147 aa18.39■□□□□ 0.53
CCM2-218ENST00000541586 A0A0U1RRA0 63 aa18.38■□□□□ 0.53
CCM2-218ENST00000541586 SMIM13P0DJ93 91 aa18.37■□□□□ 0.53
CCM2-218ENST00000541586 LINC00526Q96FQ7 95 aa18.37■□□□□ 0.53
CCM2-218ENST00000541586 DAND5Q8N907 189 aa18.37■□□□□ 0.53
CCM2-218ENST00000541586 C15orf56Q8N910 161 aa18.37■□□□□ 0.53
CCM2-218ENST00000541586 Q6ZVH6 145 aa18.36■□□□□ 0.53
CCM2-218ENST00000541586 MUSTN1Q8IVN3 82 aa18.35■□□□□ 0.53
CCM2-218ENST00000541586 A6NDN8 102 aa18.35■□□□□ 0.53
CCM2-218ENST00000541586 PSCAO43653 123 aa18.34■□□□□ 0.53
CCM2-218ENST00000541586 HIGD2BQ4VC39 106 aa18.34■□□□□ 0.53
CCM2-218ENST00000541586 FRAS1Q86XX4 4008 aa18.33■□□□□ 0.53
CCM2-218ENST00000541586 RTL8CO15255 209 aa18.33■□□□□ 0.52
CCM2-218ENST00000541586 NTN5Q8WTR8 489 aaPredicted RBP18.32■□□□□ 0.52
CCM2-218ENST00000541586 ERG28Q9UKR5 140 aa18.32■□□□□ 0.52
CCM2-218ENST00000541586 NPC2P61916 151 aa18.32■□□□□ 0.52
CCM2-218ENST00000541586 NHP2Q9NX24 153 aaKnown RBP18.32■□□□□ 0.52
CCM2-218ENST00000541586 ZNF561-AS1K7EIQ3 104 aa18.31■□□□□ 0.52
CCM2-218ENST00000541586 UNQ6190/PRO20217Q6UXQ8 127 aa18.31■□□□□ 0.52
CCM2-218ENST00000541586 Q6ZRN7 208 aaPredicted RBP18.31■□□□□ 0.52
CCM2-218ENST00000541586 COX11Q9Y6N1 276 aa18.31■□□□□ 0.52
CCM2-218ENST00000541586 PFN2P35080 140 aa18.3■□□□□ 0.52
CCM2-218ENST00000541586 C10orf25Q5T742 122 aa18.3■□□□□ 0.52
CCM2-218ENST00000541586 TMEM238LA0A1B0GVL6 79 aa18.29■□□□□ 0.52
CCM2-218ENST00000541586 A6NJY4 79 aa18.29■□□□□ 0.52
CCM2-218ENST00000541586 LINC00158P58513 81 aa18.29■□□□□ 0.52
CCM2-218ENST00000541586 IFITM1P13164 125 aa18.29■□□□□ 0.52
CCM2-218ENST00000541586 RPL24P83731 157 aaKnown RBP18.29■□□□□ 0.52
CCM2-218ENST00000541586 GVQW2A0A096LPI5 108 aaPredicted RBP18.28■□□□□ 0.52
CCM2-218ENST00000541586 EIF4EBP3O60516 100 aaPredicted RBP18.28■□□□□ 0.52
CCM2-218ENST00000541586 K7ERJ3 54 aa18.27■□□□□ 0.52
CCM2-218ENST00000541586 MIR7-3HGQ8N6C7 128 aa18.27■□□□□ 0.52
CCM2-218ENST00000541586 LINC00308Q8TCZ7 52 aa18.27■□□□□ 0.52
CCM2-218ENST00000541586 A4D1N5 150 aa18.26■□□□□ 0.51
CCM2-218ENST00000541586 DNAH17Q9UFH2 4485 aa18.26■□□□□ 0.51
CCM2-218ENST00000541586 C9orf116Q5BN46 136 aaPredicted RBP18.26■□□□□ 0.51
CCM2-218ENST00000541586 TAX1BP3O14907 124 aa18.25■□□□□ 0.51
CCM2-218ENST00000541586 A0A1B0GWB2 263 aa18.24■□□□□ 0.51
CCM2-218ENST00000541586 USP17L23D6RBM5 183 aa18.24■□□□□ 0.51
CCM2-218ENST00000541586 SOSTDC1Q6X4U4 206 aa18.24■□□□□ 0.51
CCM2-218ENST00000541586 C2orf48Q96LS8 159 aa18.24■□□□□ 0.51
CCM2-218ENST00000541586 TNP2Q05952 138 aa18.23■□□□□ 0.51
CCM2-218ENST00000541586 CAMK2N2Q96S95 79 aa18.23■□□□□ 0.51
CCM2-218ENST00000541586 COX17Q14061 63 aa18.23■□□□□ 0.51
CCM2-218ENST00000541586 CFC1BP0CG36 223 aa18.21■□□□□ 0.51
CCM2-218ENST00000541586 CFC1P0CG37 223 aa18.21■□□□□ 0.51
CCM2-218ENST00000541586 COPS9Q8WXC6 57 aa18.21■□□□□ 0.51
CCM2-218ENST00000541586 RAB37Q96AX2 223 aa18.21■□□□□ 0.51
CCM2-218ENST00000541586 C6orf48Q9UBA6 75 aa18.21■□□□□ 0.51
CCM2-218ENST00000541586 LECT2O14960 151 aa18.2■□□□□ 0.5
CCM2-218ENST00000541586 FAT2Q9NYQ8 4349 aa18.2■□□□□ 0.5
CCM2-218ENST00000541586 F8WDY8 70 aa18.18■□□□□ 0.5
CCM2-218ENST00000541586 Q6ZRU5 148 aa18.18■□□□□ 0.5
CCM2-218ENST00000541586 LINC00336Q6ZUF6 198 aa18.18■□□□□ 0.5
CCM2-218ENST00000541586 TRBV30A0A0K0K1B3 111 aa18.18■□□□□ 0.5
CCM2-218ENST00000541586 A0A1B0GV90 55 aa18.18■□□□□ 0.5
CCM2-218ENST00000541586 PPDPFQ9H3Y8 114 aa18.18■□□□□ 0.5
CCM2-218ENST00000541586 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.17■□□□□ 0.5
CCM2-218ENST00000541586 SYCNQ0VAF6 134 aa18.14■□□□□ 0.49
CCM2-218ENST00000541586 WFDC2Q14508 124 aa18.14■□□□□ 0.49
CCM2-218ENST00000541586 A0A087WTM6 91 aa18.13■□□□□ 0.49
CCM2-218ENST00000541586 A0A0B4J2C4 111 aa18.13■□□□□ 0.49
CCM2-218ENST00000541586 LRCOL1A6NCL2 159 aa18.13■□□□□ 0.49
CCM2-218ENST00000541586 C9orf118A6NHY6 69 aa18.11■□□□□ 0.49
CCM2-218ENST00000541586 SLPIP03973 132 aa18.11■□□□□ 0.49
CCM2-218ENST00000541586 NAA38Q9BRA0 125 aaKnown RBP18.1■□□□□ 0.49
CCM2-218ENST00000541586 SND1-IT1Q9HBX3 110 aa18.1■□□□□ 0.49
CCM2-218ENST00000541586 PRO1854Q9UHT4 67 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms