RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 CHCHD5Q9BSY4 110 aa7.45□□□□□ -1.22
CHFR-219ENST00000541341 SACSQ9NZJ4 4579 aa7.44□□□□□ -1.22
CHFR-219ENST00000541341 NDUFC2-KCTD14E9PQ53 114 aa7.44□□□□□ -1.22
CHFR-219ENST00000541341 UBE2L6O14933 153 aa7.44□□□□□ -1.22
CHFR-219ENST00000541341 GHRHP01286 108 aa7.44□□□□□ -1.22
CHFR-219ENST00000541341 DYNC2H1Q8NCM8 4307 aaKnown RBP7.44□□□□□ -1.22
CHFR-219ENST00000541341 TENM3Q9P273 2699 aa7.44□□□□□ -1.22
CHFR-219ENST00000541341 HYDINQ4G0P3 5121 aa7.43□□□□□ -1.22
CHFR-219ENST00000541341 DNAH7Q8WXX0 4024 aa7.43□□□□□ -1.22
CHFR-219ENST00000541341 DEFB1P60022 68 aa7.43□□□□□ -1.22
CHFR-219ENST00000541341 C5orf47Q569G3 176 aa7.43□□□□□ -1.22
CHFR-219ENST00000541341 ZNF625Q96I27 306 aaPredicted RBP7.43□□□□□ -1.22
CHFR-219ENST00000541341 IBA57-AS1B1ANH7 110 aa7.42□□□□□ -1.22
CHFR-219ENST00000541341 SMIM1B2RUZ4 78 aa7.42□□□□□ -1.22
CHFR-219ENST00000541341 IGKV3-20P01619 116 aa7.42□□□□□ -1.22
CHFR-219ENST00000541341 HIST1H4AP62805 103 aaKnown RBP7.42□□□□□ -1.22
CHFR-219ENST00000541341 RPL18AQ02543 176 aaKnown RBP7.42□□□□□ -1.22
CHFR-219ENST00000541341 LINC00242Q5T6M2 205 aa7.42□□□□□ -1.22
CHFR-219ENST00000541341 LINC01561Q8N1V8 128 aa7.42□□□□□ -1.22
CHFR-219ENST00000541341 MUC7Q8TAX7 377 aa7.42□□□□□ -1.22
CHFR-219ENST00000541341 FAM104AQ969W3 186 aa7.42□□□□□ -1.22
CHFR-219ENST00000541341 TRBV10-3A0A0K0K1G6 114 aa7.41□□□□□ -1.22
CHFR-219ENST00000541341 SYNJ2BPP57105 145 aa7.41□□□□□ -1.22
CHFR-219ENST00000541341 SERP2Q8N6R1 65 aa7.41□□□□□ -1.22
CHFR-219ENST00000541341 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.4□□□□□ -1.22
CHFR-219ENST00000541341 IGKV2-29A2NJV5 120 aaPredicted RBP7.4□□□□□ -1.22
CHFR-219ENST00000541341 K7EQD1 137 aa7.4□□□□□ -1.22
CHFR-219ENST00000541341 CCL24O00175 119 aa7.4□□□□□ -1.22
CHFR-219ENST00000541341 DEFB131AP59861 70 aa7.4□□□□□ -1.22
CHFR-219ENST00000541341 DYNLRB2Q8TF09 96 aa7.4□□□□□ -1.22
CHFR-219ENST00000541341 OBSCN-AS1Q96MR7 158 aa7.4□□□□□ -1.22
CHFR-219ENST00000541341 TMEM243Q9BU79 118 aa7.4□□□□□ -1.22
CHFR-219ENST00000541341 LYSTQ99698 3801 aa7.4□□□□□ -1.23
CHFR-219ENST00000541341 CSMD3Q7Z407 3707 aa7.39□□□□□ -1.23
CHFR-219ENST00000541341 STARD9Q9P2P6 4700 aa7.39□□□□□ -1.23
CHFR-219ENST00000541341 IGHV3OR16-12A0A075B7B8 117 aa7.39□□□□□ -1.23
CHFR-219ENST00000541341 hADV29S1A0JD25 119 aa7.39□□□□□ -1.23
CHFR-219ENST00000541341 C11orf72Q8NBR9 251 aa7.39□□□□□ -1.23
CHFR-219ENST00000541341 COX7B2Q8TF08 81 aa7.39□□□□□ -1.23
CHFR-219ENST00000541341 SND1-IT1Q9HBX3 110 aa7.39□□□□□ -1.23
CHFR-219ENST00000541341 CDC42SE2Q9NRR3 84 aa7.39□□□□□ -1.23
CHFR-219ENST00000541341 NDUFC2O95298 119 aa7.38□□□□□ -1.23
CHFR-219ENST00000541341 NPC2P61916 151 aa7.38□□□□□ -1.23
CHFR-219ENST00000541341 ORMDL1Q9P0S3 153 aa7.38□□□□□ -1.23
CHFR-219ENST00000541341 KLK5Q9Y337 293 aaPredicted RBP7.38□□□□□ -1.23
CHFR-219ENST00000541341 BIRC6Q9NR09 4857 aa7.38□□□□□ -1.23
CHFR-219ENST00000541341 TENM2Q9NT68 2774 aa7.37□□□□□ -1.23
CHFR-219ENST00000541341 TMEM256-PLSCR3K7ERE1 68 aa7.37□□□□□ -1.23
CHFR-219ENST00000541341 PDE6GP18545 87 aa7.37□□□□□ -1.23
CHFR-219ENST00000541341 SLURP1P55000 103 aa7.37□□□□□ -1.23
CHFR-219ENST00000541341 C9orf66Q5T8R8 295 aa7.37□□□□□ -1.23
CHFR-219ENST00000541341 CEMP1Q6PRD7 247 aaPredicted RBP7.37□□□□□ -1.23
CHFR-219ENST00000541341 IGHV3-73A0A0B4J1V6 119 aa7.36□□□□□ -1.23
CHFR-219ENST00000541341 TRBV6-4A0A1B0GX49 114 aa7.36□□□□□ -1.23
CHFR-219ENST00000541341 F5H768 121 aa7.36□□□□□ -1.23
CHFR-219ENST00000541341 HTN1P15515 57 aa7.36□□□□□ -1.23
CHFR-219ENST00000541341 CASC10Q5T4H9 136 aa7.36□□□□□ -1.23
CHFR-219ENST00000541341 STHQ8IWL8 128 aa7.36□□□□□ -1.23
CHFR-219ENST00000541341 SORL1Q92673 2214 aa7.36□□□□□ -1.23
CHFR-219ENST00000541341 C3orf84H3BNL1 204 aa7.35□□□□□ -1.23
CHFR-219ENST00000541341 COX17Q14061 63 aa7.35□□□□□ -1.23
CHFR-219ENST00000541341 IL17DQ8TAD2 202 aa7.35□□□□□ -1.23
CHFR-219ENST00000541341 DEFB104AQ8WTQ1 72 aa7.35□□□□□ -1.23
CHFR-219ENST00000541341 MAP6D1Q9H9H5 199 aa7.35□□□□□ -1.23
CHFR-219ENST00000541341 TRAV13-1A0A0B4J241 112 aa7.34□□□□□ -1.23
CHFR-219ENST00000541341 KNCNA6PVL3 124 aa7.34□□□□□ -1.23
CHFR-219ENST00000541341 CCKP06307 115 aa7.34□□□□□ -1.23
CHFR-219ENST00000541341 LINC00694P0DN24 101 aa7.34□□□□□ -1.23
CHFR-219ENST00000541341 LINC00158P58513 81 aa7.34□□□□□ -1.23
CHFR-219ENST00000541341 RNASE13Q5GAN3 156 aaKnown RBP7.34□□□□□ -1.23
CHFR-219ENST00000541341 C16orf74Q96GX8 76 aa7.34□□□□□ -1.23
CHFR-219ENST00000541341 COX6A2Q02221 97 aa7.33□□□□□ -1.24
CHFR-219ENST00000541341 UBL5Q9BZL1 73 aa7.33□□□□□ -1.24
CHFR-219ENST00000541341 A0A087WZ39 114 aa7.32□□□□□ -1.24
CHFR-219ENST00000541341 TRGV1A0A0A0MS02 117 aa7.32□□□□□ -1.24
CHFR-219ENST00000541341 A8MZ25 164 aa7.32□□□□□ -1.24
CHFR-219ENST00000541341 RBMY1FQ15415 496 aaKnown RBP7.32□□□□□ -1.24
CHFR-219ENST00000541341 SOSTDC1Q6X4U4 206 aa7.32□□□□□ -1.24
CHFR-219ENST00000541341 MIR7-3HGQ8N6C7 128 aa7.32□□□□□ -1.24
CHFR-219ENST00000541341 SMCR5Q8TEV8 140 aa7.32□□□□□ -1.24
CHFR-219ENST00000541341 C2orf48Q96LS8 159 aa7.32□□□□□ -1.24
CHFR-219ENST00000541341 DNAH1Q9P2D7 4330 aa7.31□□□□□ -1.24
CHFR-219ENST00000541341 IGLV1-51P01701 117 aa7.31□□□□□ -1.24
CHFR-219ENST00000541341 EDN2P20800 178 aa7.31□□□□□ -1.24
CHFR-219ENST00000541341 DEFB114Q30KQ6 69 aa7.31□□□□□ -1.24
CHFR-219ENST00000541341 SMIM11BQ8TCY0 68 aa7.31□□□□□ -1.24
CHFR-219ENST00000541341 LINC00167Q96N53 147 aa7.31□□□□□ -1.24
CHFR-219ENST00000541341 IGHV3-38A0A0C4DH36 116 aa7.3□□□□□ -1.24
CHFR-219ENST00000541341 SMIM9A6NGZ8 99 aa7.3□□□□□ -1.24
CHFR-219ENST00000541341 PAX4O43316 350 aa7.3□□□□□ -1.24
CHFR-219ENST00000541341 SS18Q15532 418 aa7.3□□□□□ -1.24
CHFR-219ENST00000541341 Q6ZSN1 163 aa7.3□□□□□ -1.24
CHFR-219ENST00000541341 NACAE9PAV3 2078 aa7.3□□□□□ -1.24
CHFR-219ENST00000541341 PLECQ15149 4684 aaKnown RBP7.3□□□□□ -1.24
CHFR-219ENST00000541341 STAB2Q8WWQ8 2551 aa7.29□□□□□ -1.24
CHFR-219ENST00000541341 USP17L23D6RBM5 183 aa7.29□□□□□ -1.24
CHFR-219ENST00000541341 Q8IZM0 81 aa7.29□□□□□ -1.24
CHFR-219ENST00000541341 LOC107984640A0A0U1RRK4 108 aa7.28□□□□□ -1.24
CHFR-219ENST00000541341 LCE6AA0A183 80 aa7.28□□□□□ -1.24
CHFR-219ENST00000541341 NDUFC1O43677 76 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms