RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 LIMD2Q9BT23 127 aa2.48□□□□□ -2.01
YBX3-210ENST00000540975 CHCHD7Q9BUK0 85 aa2.48□□□□□ -2.01
YBX3-210ENST00000540975 IGLV6-57P01721 117 aa2.47□□□□□ -2.01
YBX3-210ENST00000540975 TRGV3P03979 118 aa2.47□□□□□ -2.01
YBX3-210ENST00000540975 TFF1P04155 84 aa2.47□□□□□ -2.01
YBX3-210ENST00000540975 MSMBP08118 114 aa2.47□□□□□ -2.01
YBX3-210ENST00000540975 TMEM14BQ9NUH8 114 aa2.47□□□□□ -2.01
YBX3-210ENST00000540975 C22orf24Q9Y442 160 aa2.47□□□□□ -2.01
YBX3-210ENST00000540975 PRRC2BQ5JSZ5 2229 aaKnown RBP2.47□□□□□ -2.01
YBX3-210ENST00000540975 A0A0J9YX75 114 aa2.46□□□□□ -2.02
YBX3-210ENST00000540975 CRIP1P50238 77 aa2.46□□□□□ -2.02
YBX3-210ENST00000540975 LYZL1Q6UWQ5 148 aa2.46□□□□□ -2.02
YBX3-210ENST00000540975 CDC42SE2Q9NRR3 84 aa2.46□□□□□ -2.02
YBX3-210ENST00000540975 CACNA1CQ13936 2221 aa2.46□□□□□ -2.02
YBX3-210ENST00000540975 PCNX2A6NKB5 2137 aa2.45□□□□□ -2.02
YBX3-210ENST00000540975 IGKV1D-37A0A075B6S9 117 aa2.45□□□□□ -2.02
YBX3-210ENST00000540975 A0A087WVE0 104 aa2.45□□□□□ -2.02
YBX3-210ENST00000540975 IGIPA6NJ69 53 aa2.45□□□□□ -2.02
YBX3-210ENST00000540975 PSCAO43653 123 aa2.45□□□□□ -2.02
YBX3-210ENST00000540975 NDUFA3O95167 84 aa2.45□□□□□ -2.02
YBX3-210ENST00000540975 Q6ZS52 159 aa2.45□□□□□ -2.02
YBX3-210ENST00000540975 SNURFQ9Y675 71 aa2.45□□□□□ -2.02
YBX3-210ENST00000540975 ICOSQ9Y6W8 199 aa2.45□□□□□ -2.02
YBX3-210ENST00000540975 PLXNB1O43157 2135 aa2.45□□□□□ -2.02
YBX3-210ENST00000540975 TRBV6-8A0A0A6YYG3 113 aa2.44□□□□□ -2.02
YBX3-210ENST00000540975 IGHV3-15A0A0B4J1V0 119 aa2.44□□□□□ -2.02
YBX3-210ENST00000540975 IGHV3-73A0A0B4J1V6 119 aa2.44□□□□□ -2.02
YBX3-210ENST00000540975 IGKV3D-7A0A0C4DH55 119 aa2.44□□□□□ -2.02
YBX3-210ENST00000540975 TRBV7-4A0A0J9YYF1 115 aa2.44□□□□□ -2.02
YBX3-210ENST00000540975 LOC101927531A0A1B0GV80 90 aa2.44□□□□□ -2.02
YBX3-210ENST00000540975 PRCDQ00LT1 54 aa2.44□□□□□ -2.02
YBX3-210ENST00000540975 C10orf113Q5VZT2 155 aa2.44□□□□□ -2.02
YBX3-210ENST00000540975 HCP5Q6MZN7 132 aa2.44□□□□□ -2.02
YBX3-210ENST00000540975 Q6ZQT0 140 aa2.44□□□□□ -2.02
YBX3-210ENST00000540975 TMEM14CQ9P0S9 112 aa2.44□□□□□ -2.02
YBX3-210ENST00000540975 C11orf86A6NJI1 115 aa2.43□□□□□ -2.02
YBX3-210ENST00000540975 BAALC-AS2P0C853 105 aa2.43□□□□□ -2.02
YBX3-210ENST00000540975 OBSCN-AS1Q96MR7 158 aa2.43□□□□□ -2.02
YBX3-210ENST00000540975 U3KQA8 63 aa2.43□□□□□ -2.02
YBX3-210ENST00000540975 MED13Q9UHV7 2174 aa2.43□□□□□ -2.02
YBX3-210ENST00000540975 F5P12259 2224 aa2.42□□□□□ -2.02
YBX3-210ENST00000540975 GOLGA4Q13439 2230 aaKnown RBP2.42□□□□□ -2.02
YBX3-210ENST00000540975 TRAV23DV6A0A075B6W5 121 aa2.42□□□□□ -2.02
YBX3-210ENST00000540975 TRAV12-3A0A0B4J271 114 aa2.42□□□□□ -2.02
YBX3-210ENST00000540975 ERHP84090 104 aaKnown RBP2.42□□□□□ -2.02
YBX3-210ENST00000540975 MUSTN1Q8IVN3 82 aa2.42□□□□□ -2.02
YBX3-210ENST00000540975 TMEM254Q8TBM7 123 aa2.42□□□□□ -2.02
YBX3-210ENST00000540975 SMIM2Q9BVW6 85 aa2.42□□□□□ -2.02
YBX3-210ENST00000540975 TTTY12Q9BZ98 90 aa2.42□□□□□ -2.02
YBX3-210ENST00000540975 NDUFA4L2Q9NRX3 87 aa2.42□□□□□ -2.02
YBX3-210ENST00000540975 MRPL36Q9P0J6 103 aaKnown RBP2.42□□□□□ -2.02
YBX3-210ENST00000540975 PCNTO95613 3336 aa2.42□□□□□ -2.02
YBX3-210ENST00000540975 ALPK2Q86TB3 2170 aa2.42□□□□□ -2.02
YBX3-210ENST00000540975 MYO7BQ6PIF6 2116 aa2.41□□□□□ -2.02
YBX3-210ENST00000540975 I3L3M4 83 aa2.41□□□□□ -2.02
YBX3-210ENST00000540975 DNAL4O96015 105 aa2.41□□□□□ -2.02
YBX3-210ENST00000540975 IGHV1-46P01743 117 aa2.41□□□□□ -2.02
YBX3-210ENST00000540975 MIR22HGQ0VDD5 57 aa2.41□□□□□ -2.02
YBX3-210ENST00000540975 DEFB119Q8N690 84 aa2.41□□□□□ -2.02
YBX3-210ENST00000540975 MUC7Q8TAX7 377 aa2.41□□□□□ -2.02
YBX3-210ENST00000540975 PRR15LQ9BU68 103 aa2.41□□□□□ -2.02
YBX3-210ENST00000540975 C14orf132Q9NPU4 83 aa2.41□□□□□ -2.02
YBX3-210ENST00000540975 MYO7AQ13402 2215 aa2.41□□□□□ -2.02
YBX3-210ENST00000540975 MUC4Q99102 2169 aa2.4□□□□□ -2.02
YBX3-210ENST00000540975 A0A0C4DFX4 3053 aa2.4□□□□□ -2.03
YBX3-210ENST00000540975 A0A087WSZ3 146 aa2.4□□□□□ -2.03
YBX3-210ENST00000540975 H7C2G1 150 aa2.4□□□□□ -2.03
YBX3-210ENST00000540975 SAA2P0DJI9 122 aaPredicted RBP2.4□□□□□ -2.03
YBX3-210ENST00000540975 LINC00846Q9NV44 126 aa2.4□□□□□ -2.03
YBX3-210ENST00000540975 HEATR1Q9H583 2144 aaKnown RBP2.39□□□□□ -2.03
YBX3-210ENST00000540975 H3BRN7 92 aa2.39□□□□□ -2.03
YBX3-210ENST00000540975 PDE6HQ13956 83 aa2.39□□□□□ -2.03
YBX3-210ENST00000540975 RPL39P5Q59GN2 51 aa2.39□□□□□ -2.03
YBX3-210ENST00000540975 Q8TAT8 98 aa2.39□□□□□ -2.03
YBX3-210ENST00000540975 TMEM167AQ8TBQ9 72 aa2.39□□□□□ -2.03
YBX3-210ENST00000540975 C20orf166-AS1Q96NR2 134 aa2.39□□□□□ -2.03
YBX3-210ENST00000540975 FAM215AQ9Y5M1 114 aa2.39□□□□□ -2.03
YBX3-210ENST00000540975 DNAH12Q6ZR08 3092 aa2.39□□□□□ -2.03
YBX3-210ENST00000540975 PDE4DIPQ5VU43 2346 aa2.39□□□□□ -2.03
YBX3-210ENST00000540975 M0R1W7 72 aa2.38□□□□□ -2.03
YBX3-210ENST00000540975 RP1P56715 2156 aa2.38□□□□□ -2.03
YBX3-210ENST00000540975 CSAG1Q6PB30 78 aa2.38□□□□□ -2.03
YBX3-210ENST00000540975 ZNF833PQ6ZTB9 187 aa2.38□□□□□ -2.03
YBX3-210ENST00000540975 FDCSPQ8NFU4 85 aa2.38□□□□□ -2.03
YBX3-210ENST00000540975 HTTP42858 3142 aa2.38□□□□□ -2.03
YBX3-210ENST00000540975 CEP350Q5VT06 3117 aa2.37□□□□□ -2.03
YBX3-210ENST00000540975 UTRNP46939 3433 aa2.37□□□□□ -2.03
YBX3-210ENST00000540975 IGLV10-54A0A075B6I4 117 aa2.37□□□□□ -2.03
YBX3-210ENST00000540975 TRAV10A0A0B4J240 114 aa2.37□□□□□ -2.03
YBX3-210ENST00000540975 TRBV6-5A0A0K0K1A5 114 aa2.37□□□□□ -2.03
YBX3-210ENST00000540975 CLPSL1A2RUU4 121 aa2.37□□□□□ -2.03
YBX3-210ENST00000540975 M0R3E3 92 aa2.37□□□□□ -2.03
YBX3-210ENST00000540975 IGLV7-43P04211 117 aa2.37□□□□□ -2.03
YBX3-210ENST00000540975 ELOF1P60002 83 aaKnown RBP2.37□□□□□ -2.03
YBX3-210ENST00000540975 WT1-ASQ06250 92 aa2.37□□□□□ -2.03
YBX3-210ENST00000540975 NREPQ16612 68 aa2.37□□□□□ -2.03
YBX3-210ENST00000540975 DEFB113Q30KQ7 82 aa2.37□□□□□ -2.03
YBX3-210ENST00000540975 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.37□□□□□ -2.03
YBX3-210ENST00000540975 Q8NAQ8 132 aa2.37□□□□□ -2.03
YBX3-210ENST00000540975 KAAG1Q9UBP8 84 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 321.5 ms