RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.42□□□□□ -1.06
SMAD3-204ENST00000540846 A0A0B4J2C4 111 aa8.42□□□□□ -1.06
SMAD3-204ENST00000540846 C3orf84H3BNL1 204 aa8.42□□□□□ -1.06
SMAD3-204ENST00000540846 COX7A2LO14548 114 aa8.42□□□□□ -1.06
SMAD3-204ENST00000540846 APOMO95445 188 aa8.42□□□□□ -1.06
SMAD3-204ENST00000540846 UPK3BQ9BT76 320 aa8.42□□□□□ -1.06
SMAD3-204ENST00000540846 TOMM7Q9P0U1 55 aa8.42□□□□□ -1.06
SMAD3-204ENST00000540846 KLK12Q9UKR0 248 aa8.42□□□□□ -1.06
SMAD3-204ENST00000540846 IGLV10-54A0A075B6I4 117 aa8.41□□□□□ -1.06
SMAD3-204ENST00000540846 PRSS2P07478 247 aa8.41□□□□□ -1.06
SMAD3-204ENST00000540846 FABP2P12104 132 aa8.41□□□□□ -1.06
SMAD3-204ENST00000540846 FOXI1Q12951 378 aa8.41□□□□□ -1.06
SMAD3-204ENST00000540846 Q8IZM0 81 aa8.41□□□□□ -1.06
SMAD3-204ENST00000540846 PPDPFQ9H3Y8 114 aa8.41□□□□□ -1.06
SMAD3-204ENST00000540846 PGPEP1Q9NXJ5 209 aa8.41□□□□□ -1.06
SMAD3-204ENST00000540846 DNAH1Q9P2D7 4330 aa8.41□□□□□ -1.06
SMAD3-204ENST00000540846 K7EP34 96 aa8.4□□□□□ -1.06
SMAD3-204ENST00000540846 EIF4EBP3O60516 100 aaPredicted RBP8.4□□□□□ -1.06
SMAD3-204ENST00000540846 IGHV3-33P01772 117 aa8.4□□□□□ -1.06
SMAD3-204ENST00000540846 CCL18P55774 89 aa8.4□□□□□ -1.06
SMAD3-204ENST00000540846 MEIG1Q5JSS6 88 aa8.4□□□□□ -1.06
SMAD3-204ENST00000540846 ENHOQ6UWT2 76 aa8.4□□□□□ -1.06
SMAD3-204ENST00000540846 TSPAN13O95857 204 aa8.39□□□□□ -1.07
SMAD3-204ENST00000540846 GTF2H5Q6ZYL4 71 aa8.39□□□□□ -1.07
SMAD3-204ENST00000540846 COPS9Q8WXC6 57 aa8.39□□□□□ -1.07
SMAD3-204ENST00000540846 PRO1854Q9UHT4 67 aa8.39□□□□□ -1.07
SMAD3-204ENST00000540846 VPS13DQ5THJ4 4388 aa8.39□□□□□ -1.07
SMAD3-204ENST00000540846 TRAV8-4A0A0B4J246 113 aa8.39□□□□□ -1.07
SMAD3-204ENST00000540846 GAGE10A6NGK3 116 aa8.39□□□□□ -1.07
SMAD3-204ENST00000540846 CRPP02741 224 aa8.39□□□□□ -1.07
SMAD3-204ENST00000540846 LINC01556Q5JQF7 62 aa8.39□□□□□ -1.07
SMAD3-204ENST00000540846 DAND5Q8N907 189 aa8.39□□□□□ -1.07
SMAD3-204ENST00000540846 LINC00308Q8TCZ7 52 aa8.39□□□□□ -1.07
SMAD3-204ENST00000540846 CBY1Q9Y3M2 126 aa8.39□□□□□ -1.07
SMAD3-204ENST00000540846 SPCS1Q9Y6A9 102 aa8.39□□□□□ -1.07
SMAD3-204ENST00000540846 GAGE12HA6NDE8 117 aa8.38□□□□□ -1.07
SMAD3-204ENST00000540846 IBA57-AS1B1ANH7 110 aa8.38□□□□□ -1.07
SMAD3-204ENST00000540846 DNAH10OSP0CZ25 163 aa8.38□□□□□ -1.07
SMAD3-204ENST00000540846 MALP21145 153 aa8.37□□□□□ -1.07
SMAD3-204ENST00000540846 CXCL5P42830 114 aa8.37□□□□□ -1.07
SMAD3-204ENST00000540846 KIAA0087Q14695 138 aa8.37□□□□□ -1.07
SMAD3-204ENST00000540846 C6orf226Q5I0X4 101 aa8.37□□□□□ -1.07
SMAD3-204ENST00000540846 UBE2WQ96B02 151 aa8.37□□□□□ -1.07
SMAD3-204ENST00000540846 NPC2P61916 151 aa8.36□□□□□ -1.07
SMAD3-204ENST00000540846 SOSTDC1Q6X4U4 206 aa8.36□□□□□ -1.07
SMAD3-204ENST00000540846 A0A0U1RRA0 63 aa8.35□□□□□ -1.07
SMAD3-204ENST00000540846 ERG28Q9UKR5 140 aa8.35□□□□□ -1.07
SMAD3-204ENST00000540846 CFAP161Q6P656 301 aa8.35□□□□□ -1.07
SMAD3-204ENST00000540846 ALMS1Q8TCU4 4167 aa8.34□□□□□ -1.07
SMAD3-204ENST00000540846 CKS1BP61024 79 aa8.34□□□□□ -1.07
SMAD3-204ENST00000540846 LYRM7Q5U5X0 104 aa8.34□□□□□ -1.07
SMAD3-204ENST00000540846 KRTAP26-1Q6PEX3 210 aa8.34□□□□□ -1.07
SMAD3-204ENST00000540846 UBE2DNLQ8IWF7 75 aa8.34□□□□□ -1.07
SMAD3-204ENST00000540846 MIR7-3HGQ8N6C7 128 aa8.34□□□□□ -1.07
SMAD3-204ENST00000540846 LINC00476Q8WZB0 136 aa8.34□□□□□ -1.07
SMAD3-204ENST00000540846 KRTAP1-5Q9BYS1 174 aa8.34□□□□□ -1.07
SMAD3-204ENST00000540846 SPAG11BQ08648 103 aa8.33□□□□□ -1.08
SMAD3-204ENST00000540846 C2orf82Q6UX34 121 aa8.33□□□□□ -1.08
SMAD3-204ENST00000540846 LINC00158P58513 81 aa8.32□□□□□ -1.08
SMAD3-204ENST00000540846 LOC107984156A0A0G2JMH3 177 aa8.31□□□□□ -1.08
SMAD3-204ENST00000540846 COX17Q14061 63 aa8.31□□□□□ -1.08
SMAD3-204ENST00000540846 ARL17AQ8IVW1 177 aa8.31□□□□□ -1.08
SMAD3-204ENST00000540846 H7C2G1 150 aa8.3□□□□□ -1.08
SMAD3-204ENST00000540846 PFN2P35080 140 aa8.3□□□□□ -1.08
SMAD3-204ENST00000540846 C1orf43Q9BWL3 253 aa8.3□□□□□ -1.08
SMAD3-204ENST00000540846 RPL13AP40429 203 aaKnown RBP8.29□□□□□ -1.08
SMAD3-204ENST00000540846 Q1RN00 199 aa8.29□□□□□ -1.08
SMAD3-204ENST00000540846 KMT2AQ03164 3969 aa8.29□□□□□ -1.08
SMAD3-204ENST00000540846 TRBV30A0A0K0K1B3 111 aa8.28□□□□□ -1.08
SMAD3-204ENST00000540846 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
SMAD3-204ENST00000540846 DNAH6Q9C0G6 4158 aa8.28□□□□□ -1.08
SMAD3-204ENST00000540846 TRBV20-1A0A075B6N2 111 aa8.27□□□□□ -1.09
SMAD3-204ENST00000540846 NBDYA0A0U1RRE5 68 aa8.27□□□□□ -1.09
SMAD3-204ENST00000540846 H3BMG7 143 aa8.27□□□□□ -1.09
SMAD3-204ENST00000540846 TRIAP1O43715 76 aa8.27□□□□□ -1.09
SMAD3-204ENST00000540846 PSMB2P49721 201 aa8.27□□□□□ -1.09
SMAD3-204ENST00000540846 C6orf223Q8N319 242 aa8.27□□□□□ -1.09
SMAD3-204ENST00000540846 NTN5Q8WTR8 489 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-204ENST00000540846 GVQW2A0A096LPI5 108 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-204ENST00000540846 LY6G6CO95867 125 aa8.27□□□□□ -1.09
SMAD3-204ENST00000540846 Q6ZR54 194 aa8.27□□□□□ -1.09
SMAD3-204ENST00000540846 TCL1BO95988 128 aa8.26□□□□□ -1.09
SMAD3-204ENST00000540846 C10orf25Q5T742 122 aa8.26□□□□□ -1.09
SMAD3-204ENST00000540846 UNQ6190/PRO20217Q6UXQ8 127 aa8.26□□□□□ -1.09
SMAD3-204ENST00000540846 C15orf56Q8N910 161 aa8.26□□□□□ -1.09
SMAD3-204ENST00000540846 IGKV2-28A0A075B6P5 120 aa8.25□□□□□ -1.09
SMAD3-204ENST00000540846 IGKV2D-24A0A075B6R9 120 aa8.25□□□□□ -1.09
SMAD3-204ENST00000540846 TRAV13-2A0A0B4J235 113 aa8.25□□□□□ -1.09
SMAD3-204ENST00000540846 IGKV2D-28P01615 120 aa8.25□□□□□ -1.09
SMAD3-204ENST00000540846 SCGB1C2P0DMR2 95 aa8.25□□□□□ -1.09
SMAD3-204ENST00000540846 LINC00526Q96FQ7 95 aa8.25□□□□□ -1.09
SMAD3-204ENST00000540846 PRO0461Q9UI25 63 aa8.25□□□□□ -1.09
SMAD3-204ENST00000540846 C9orf116Q5BN46 136 aaPredicted RBP8.24□□□□□ -1.09
SMAD3-204ENST00000540846 TTC32Q5I0X7 151 aa8.24□□□□□ -1.09
SMAD3-204ENST00000540846 LINC00337Q8N6G1 96 aa8.24□□□□□ -1.09
SMAD3-204ENST00000540846 Q9HAA7 133 aa8.24□□□□□ -1.09
SMAD3-204ENST00000540846 LCE6AA0A183 80 aa8.23□□□□□ -1.09
SMAD3-204ENST00000540846 F8W1H4 67 aa8.23□□□□□ -1.09
SMAD3-204ENST00000540846 F8WDY8 70 aa8.23□□□□□ -1.09
SMAD3-204ENST00000540846 C2orf48Q96LS8 159 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms