RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 COX19Q49B96 90 aa12.81□□□□□ -0.36
CHFR-217ENST00000540537 SCGB3A1Q96QR1 104 aa12.81□□□□□ -0.36
CHFR-217ENST00000540537 GEMIN7Q9H840 131 aaKnown RBP12.81□□□□□ -0.36
CHFR-217ENST00000540537 CDKN2A-AS1Q9UH64 79 aa12.81□□□□□ -0.36
CHFR-217ENST00000540537 LINC01549A6NIU2 74 aa12.8□□□□□ -0.36
CHFR-217ENST00000540537 M0QXV9 152 aa12.8□□□□□ -0.36
CHFR-217ENST00000540537 C9orf129Q5T035 196 aaKnown RBP12.8□□□□□ -0.36
CHFR-217ENST00000540537 KRTAP11-1Q8IUC1 163 aa12.8□□□□□ -0.36
CHFR-217ENST00000540537 ALKBH7Q9BT30 221 aaPredicted RBP12.8□□□□□ -0.36
CHFR-217ENST00000540537 COMMD7Q86VX2 200 aa12.79□□□□□ -0.36
CHFR-217ENST00000540537 ODF1Q14990 250 aa12.78□□□□□ -0.36
CHFR-217ENST00000540537 DIRC1Q969H9 104 aa12.78□□□□□ -0.36
CHFR-217ENST00000540537 UBE2BP63146 152 aa12.77□□□□□ -0.37
CHFR-217ENST00000540537 C10orf91Q5T1B1 145 aa12.77□□□□□ -0.37
CHFR-217ENST00000540537 CXCL5P42830 114 aa12.76□□□□□ -0.37
CHFR-217ENST00000540537 LINC00469Q8N7U9 141 aa12.76□□□□□ -0.37
CHFR-217ENST00000540537 LRP2P98164 4655 aa12.76□□□□□ -0.37
CHFR-217ENST00000540537 TINCRA0A1B0GVN0 87 aa12.75□□□□□ -0.37
CHFR-217ENST00000540537 F8VRH5 84 aa12.75□□□□□ -0.37
CHFR-217ENST00000540537 RHEBQ15382 184 aa12.75□□□□□ -0.37
CHFR-217ENST00000540537 MRPL18Q9H0U6 180 aaKnown RBP12.75□□□□□ -0.37
CHFR-217ENST00000540537 CARHSP1Q9Y2V2 147 aaKnown RBP12.75□□□□□ -0.37
CHFR-217ENST00000540537 IGLV5-45A0A087WSX0 123 aa12.74□□□□□ -0.37
CHFR-217ENST00000540537 FA2HQ7L5A8 372 aa12.74□□□□□ -0.37
CHFR-217ENST00000540537 SMIM1B2RUZ4 78 aa12.73□□□□□ -0.37
CHFR-217ENST00000540537 H0Y9J4 135 aa12.73□□□□□ -0.37
CHFR-217ENST00000540537 FABP9Q0Z7S8 132 aa12.73□□□□□ -0.37
CHFR-217ENST00000540537 PDZD11Q5EBL8 140 aa12.73□□□□□ -0.37
CHFR-217ENST00000540537 RPS10P5Q9NQ39 176 aa12.73□□□□□ -0.37
CHFR-217ENST00000540537 CST9LQ9H4G1 147 aa12.72□□□□□ -0.37
CHFR-217ENST00000540537 SMCO4Q9NRQ5 59 aa12.72□□□□□ -0.37
CHFR-217ENST00000540537 PMVKQ15126 192 aa12.7□□□□□ -0.38
CHFR-217ENST00000540537 COX7B2Q8TF08 81 aa12.7□□□□□ -0.38
CHFR-217ENST00000540537 XAGE1AQ9HD64 81 aa12.7□□□□□ -0.38
CHFR-217ENST00000540537 C22orf24Q9Y442 160 aa12.69□□□□□ -0.38
CHFR-217ENST00000540537 LBHQ53QV2 105 aaPredicted RBP12.68□□□□□ -0.38
CHFR-217ENST00000540537 SPINK8P0C7L1 97 aa12.66□□□□□ -0.38
CHFR-217ENST00000540537 PRR26Q8N8Z3 221 aa12.66□□□□□ -0.38
CHFR-217ENST00000540537 TP73-AS1Q9UF72 201 aa12.66□□□□□ -0.38
CHFR-217ENST00000540537 NUPR1O60356 82 aa12.65□□□□□ -0.38
CHFR-217ENST00000540537 IGLV1-50A0A075B6I6 118 aa12.64□□□□□ -0.39
CHFR-217ENST00000540537 H3BRM9 83 aa12.64□□□□□ -0.39
CHFR-217ENST00000540537 TRAPPC1Q9Y5R8 145 aa12.64□□□□□ -0.39
CHFR-217ENST00000540537 KRTAP1-4P0C5Y4 121 aa12.63□□□□□ -0.39
CHFR-217ENST00000540537 A0A096LNJ9 63 aa12.62□□□□□ -0.39
CHFR-217ENST00000540537 ZNF861PO60384 105 aa12.62□□□□□ -0.39
CHFR-217ENST00000540537 IGLC3P0DOY3 106 aa12.62□□□□□ -0.39
CHFR-217ENST00000540537 MRPL55Q7Z7F7 128 aaKnown RBP12.62□□□□□ -0.39
CHFR-217ENST00000540537 C18orf32Q8TCD1 76 aa12.62□□□□□ -0.39
CHFR-217ENST00000540537 LINC00614P0C842 121 aa12.61□□□□□ -0.39
CHFR-217ENST00000540537 URB1-AS1Q96HZ7 61 aa12.61□□□□□ -0.39
CHFR-217ENST00000540537 HBDP02042 147 aa12.59□□□□□ -0.39
CHFR-217ENST00000540537 APOC3P02656 99 aa12.59□□□□□ -0.39
CHFR-217ENST00000540537 IGLV5-39A0A0G2JS06 123 aa12.58□□□□□ -0.4
CHFR-217ENST00000540537 ATP5LO75964 103 aa12.58□□□□□ -0.4
CHFR-217ENST00000540537 NDUFA6P56556 154 aa12.58□□□□□ -0.4
CHFR-217ENST00000540537 SNAPINO95295 136 aa12.57□□□□□ -0.4
CHFR-217ENST00000540537 RAB5BP61020 215 aa12.57□□□□□ -0.4
CHFR-217ENST00000540537 NDUFA5Q16718 116 aa12.57□□□□□ -0.4
CHFR-217ENST00000540537 SVBPQ8N300 66 aa12.57□□□□□ -0.4
CHFR-217ENST00000540537 IGLV5-37A0A075B6J1 123 aa12.56□□□□□ -0.4
CHFR-217ENST00000540537 ZNF22P17026 224 aaPredicted RBP12.56□□□□□ -0.4
CHFR-217ENST00000540537 RPL13AP40429 203 aaKnown RBP12.56□□□□□ -0.4
CHFR-217ENST00000540537 LINC00167Q96N53 147 aa12.56□□□□□ -0.4
CHFR-217ENST00000540537 BCE1O60756 84 aa12.55□□□□□ -0.4
CHFR-217ENST00000540537 PMCHL1Q16048 86 aa12.55□□□□□ -0.4
CHFR-217ENST00000540537 RNF213Q63HN8 5207 aa12.55□□□□□ -0.4
CHFR-217ENST00000540537 RPL28P46779 137 aaKnown RBP12.53□□□□□ -0.4
CHFR-217ENST00000540537 RPL37AP8A6NKH3 93 aa12.52□□□□□ -0.41
CHFR-217ENST00000540537 NKAPP1Q8N9T2 125 aa12.52□□□□□ -0.41
CHFR-217ENST00000540537 GAGE10A6NGK3 116 aa12.51□□□□□ -0.41
CHFR-217ENST00000540537 C11orf86A6NJI1 115 aa12.5□□□□□ -0.41
CHFR-217ENST00000540537 PFN2P35080 140 aa12.5□□□□□ -0.41
CHFR-217ENST00000540537 BAGE3Q86Y29 109 aa12.5□□□□□ -0.41
CHFR-217ENST00000540537 YPEL4Q96NS1 127 aa12.49□□□□□ -0.41
CHFR-217ENST00000540537 ERG28Q9UKR5 140 aa12.49□□□□□ -0.41
CHFR-217ENST00000540537 COX17Q14061 63 aa12.48□□□□□ -0.41
CHFR-217ENST00000540537 TMEM170BQ5T4T1 132 aa12.48□□□□□ -0.41
CHFR-217ENST00000540537 SFTA2Q6UW10 78 aa12.48□□□□□ -0.41
CHFR-217ENST00000540537 CHCHD1Q96BP2 118 aaKnown RBP12.46□□□□□ -0.41
CHFR-217ENST00000540537 SND1-IT1Q9HBX3 110 aa12.46□□□□□ -0.41
CHFR-217ENST00000540537 CHTOPQ9Y3Y2 248 aaKnown RBP12.45□□□□□ -0.42
CHFR-217ENST00000540537 LPAP08519 4548 aa12.44□□□□□ -0.42
CHFR-217ENST00000540537 VPREB1P12018 145 aa12.44□□□□□ -0.42
CHFR-217ENST00000540537 KRTAP13-1Q8IUC0 172 aa12.44□□□□□ -0.42
CHFR-217ENST00000540537 TRAV12-1A0A0B4J245 112 aa12.43□□□□□ -0.42
CHFR-217ENST00000540537 SCO1O75880 301 aa12.43□□□□□ -0.42
CHFR-217ENST00000540537 UBE2AP49459 152 aa12.43□□□□□ -0.42
CHFR-217ENST00000540537 ZNF625Q96I27 306 aaPredicted RBP12.43□□□□□ -0.42
CHFR-217ENST00000540537 IGKV2-28A0A075B6P5 120 aa12.42□□□□□ -0.42
CHFR-217ENST00000540537 IGKV2D-28P01615 120 aa12.42□□□□□ -0.42
CHFR-217ENST00000540537 RPL24P83731 157 aaKnown RBP12.42□□□□□ -0.42
CHFR-217ENST00000540537 A0A087X002 238 aa12.41□□□□□ -0.42
CHFR-217ENST00000540537 IFI27L1Q96BM0 104 aa12.41□□□□□ -0.42
CHFR-217ENST00000540537 CRYGAP11844 174 aa12.4□□□□□ -0.42
CHFR-217ENST00000540537 TMEM223A0PJW6 202 aa12.39□□□□□ -0.43
CHFR-217ENST00000540537 LINC00158P58513 81 aa12.36□□□□□ -0.43
CHFR-217ENST00000540537 CBLN2Q8IUK8 224 aa12.36□□□□□ -0.43
CHFR-217ENST00000540537 Q8NDZ9 215 aa12.36□□□□□ -0.43
CHFR-217ENST00000540537 TYMSOSQ8TAI1 123 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms