RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 HIST1H2BHQ93079 126 aa4.58□□□□□ -1.68
KLHL42-203ENST00000540301 HIST1H2BNQ99877 126 aa4.58□□□□□ -1.68
KLHL42-203ENST00000540301 HIST1H2BMQ99879 126 aa4.58□□□□□ -1.68
KLHL42-203ENST00000540301 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
KLHL42-203ENST00000540301 KANTRA0A1W2PQU2 76 aa4.57□□□□□ -1.68
KLHL42-203ENST00000540301 EIF4EBP3O60516 100 aaPredicted RBP4.57□□□□□ -1.68
KLHL42-203ENST00000540301 C5orf38Q86SI9 138 aa4.57□□□□□ -1.68
KLHL42-203ENST00000540301 SMDT1Q9H4I9 107 aa4.57□□□□□ -1.68
KLHL42-203ENST00000540301 RPS10P5Q9NQ39 176 aa4.57□□□□□ -1.68
KLHL42-203ENST00000540301 CDC42SE2Q9NRR3 84 aa4.57□□□□□ -1.68
KLHL42-203ENST00000540301 F8WDY8 70 aa4.56□□□□□ -1.68
KLHL42-203ENST00000540301 NDUFA1O15239 70 aa4.56□□□□□ -1.68
KLHL42-203ENST00000540301 SCGB1D1O95968 90 aa4.56□□□□□ -1.68
KLHL42-203ENST00000540301 FABP4P15090 132 aa4.56□□□□□ -1.68
KLHL42-203ENST00000540301 C10orf25Q5T742 122 aa4.56□□□□□ -1.68
KLHL42-203ENST00000540301 TPPP3Q9BW30 176 aa4.56□□□□□ -1.68
KLHL42-203ENST00000540301 BCE1O60756 84 aa4.55□□□□□ -1.68
KLHL42-203ENST00000540301 KRTAP4-11Q9BYQ6 195 aa4.55□□□□□ -1.68
KLHL42-203ENST00000540301 VCX2Q9H322 139 aa4.55□□□□□ -1.68
KLHL42-203ENST00000540301 C6orf48Q9UBA6 75 aa4.55□□□□□ -1.68
KLHL42-203ENST00000540301 TNFSF18Q9UNG2 199 aa4.55□□□□□ -1.68
KLHL42-203ENST00000540301 FXYD6-FXYD2A0A087WZ82 144 aa4.54□□□□□ -1.68
KLHL42-203ENST00000540301 KRTAP4-16G5E9R7 235 aaPredicted RBP4.54□□□□□ -1.68
KLHL42-203ENST00000540301 TRGC1P0CF51 173 aa4.54□□□□□ -1.68
KLHL42-203ENST00000540301 ATP6V0CP27449 155 aa4.54□□□□□ -1.68
KLHL42-203ENST00000540301 COX19Q49B96 90 aa4.54□□□□□ -1.68
KLHL42-203ENST00000540301 C9orf129Q5T035 196 aaKnown RBP4.54□□□□□ -1.68
KLHL42-203ENST00000540301 SPAG11AQ6PDA7 123 aa4.54□□□□□ -1.68
KLHL42-203ENST00000540301 UNQ6190/PRO20217Q6UXQ8 127 aa4.54□□□□□ -1.68
KLHL42-203ENST00000540301 CTRLP40313 264 aa4.53□□□□□ -1.68
KLHL42-203ENST00000540301 HERV-K104P63124 156 aa4.53□□□□□ -1.68
KLHL42-203ENST00000540301 GATD1Q8NB37 220 aa4.53□□□□□ -1.68
KLHL42-203ENST00000540301 TMEM18Q96B42 140 aa4.53□□□□□ -1.68
KLHL42-203ENST00000540301 SPANXA1Q9NS26 97 aa4.53□□□□□ -1.68
KLHL42-203ENST00000540301 UBE2D4Q9Y2X8 147 aa4.53□□□□□ -1.68
KLHL42-203ENST00000540301 C22orf24Q9Y442 160 aa4.53□□□□□ -1.68
KLHL42-203ENST00000540301 TRAV13-1A0A0B4J241 112 aa4.52□□□□□ -1.69
KLHL42-203ENST00000540301 SDHAF1A6NFY7 115 aa4.52□□□□□ -1.69
KLHL42-203ENST00000540301 TNFRSF6BO95407 300 aa4.52□□□□□ -1.69
KLHL42-203ENST00000540301 IGLC6P0CF74 106 aa4.52□□□□□ -1.69
KLHL42-203ENST00000540301 H2BFSP57053 126 aa4.52□□□□□ -1.69
KLHL42-203ENST00000540301 C5orf47Q569G3 176 aa4.52□□□□□ -1.69
KLHL42-203ENST00000540301 TEX43Q6ZNM6 134 aa4.52□□□□□ -1.69
KLHL42-203ENST00000540301 DAND5Q8N907 189 aa4.52□□□□□ -1.69
KLHL42-203ENST00000540301 PPP1R1CQ8WVI7 109 aa4.52□□□□□ -1.69
KLHL42-203ENST00000540301 RPL39LQ96EH5 51 aaKnown RBP4.52□□□□□ -1.69
KLHL42-203ENST00000540301 MRAP2Q96G30 205 aa4.52□□□□□ -1.69
KLHL42-203ENST00000540301 PSMG3Q9BT73 122 aaPredicted RBP4.52□□□□□ -1.69
KLHL42-203ENST00000540301 TMEM242Q9NWH2 141 aa4.52□□□□□ -1.69
KLHL42-203ENST00000540301 NAT8Q9UHE5 227 aa4.52□□□□□ -1.69
KLHL42-203ENST00000540301 IGLV8-61A0A075B6I0 122 aa4.51□□□□□ -1.69
KLHL42-203ENST00000540301 A0A1B0GW15 77 aa4.51□□□□□ -1.69
KLHL42-203ENST00000540301 I3L3M4 83 aa4.51□□□□□ -1.69
KLHL42-203ENST00000540301 PMCHP20382 165 aa4.51□□□□□ -1.69
KLHL42-203ENST00000540301 CKS1BP61024 79 aa4.51□□□□□ -1.69
KLHL42-203ENST00000540301 SERF2P84101 59 aa4.51□□□□□ -1.69
KLHL42-203ENST00000540301 BAGE2Q86Y30 109 aa4.51□□□□□ -1.69
KLHL42-203ENST00000540301 CYTL1Q9NRR1 136 aa4.51□□□□□ -1.69
KLHL42-203ENST00000540301 TRBV24-1A0A075B6N3 115 aa4.5□□□□□ -1.69
KLHL42-203ENST00000540301 NDUFC2-KCTD14E9PQ53 114 aa4.5□□□□□ -1.69
KLHL42-203ENST00000540301 PET100P0DJ07 73 aa4.5□□□□□ -1.69
KLHL42-203ENST00000540301 RNASE13Q5GAN3 156 aaKnown RBP4.5□□□□□ -1.69
KLHL42-203ENST00000540301 CST9LP1Q5W188 147 aa4.5□□□□□ -1.69
KLHL42-203ENST00000540301 KIR2DL4Q99706 377 aa4.5□□□□□ -1.69
KLHL42-203ENST00000540301 SIGMAR1Q99720 223 aa4.5□□□□□ -1.69
KLHL42-203ENST00000540301 CTXND1A0A1B0GTU2 59 aa4.49□□□□□ -1.69
KLHL42-203ENST00000540301 F2Z2F3 143 aa4.49□□□□□ -1.69
KLHL42-203ENST00000540301 TRGC2P03986 189 aa4.49□□□□□ -1.69
KLHL42-203ENST00000540301 UBE2AP49459 152 aa4.49□□□□□ -1.69
KLHL42-203ENST00000540301 ZNF726P1Q15940 193 aa4.49□□□□□ -1.69
KLHL42-203ENST00000540301 PCOTHQ58A44 107 aa4.49□□□□□ -1.69
KLHL42-203ENST00000540301 MRPL55Q7Z7F7 128 aaKnown RBP4.49□□□□□ -1.69
KLHL42-203ENST00000540301 C3orf22Q8N5N4 141 aa4.49□□□□□ -1.69
KLHL42-203ENST00000540301 LAMTOR2Q9Y2Q5 125 aa4.49□□□□□ -1.69
KLHL42-203ENST00000540301 TRBV30A0A0K0K1B3 111 aa4.48□□□□□ -1.69
KLHL42-203ENST00000540301 C9JQL5 133 aa4.48□□□□□ -1.69
KLHL42-203ENST00000540301 LYZL1Q6UWQ5 148 aa4.48□□□□□ -1.69
KLHL42-203ENST00000540301 COX6B2Q6YFQ2 88 aa4.48□□□□□ -1.69
KLHL42-203ENST00000540301 KRTAP13-1Q8IUC0 172 aa4.48□□□□□ -1.69
KLHL42-203ENST00000540301 UQCR10Q9UDW1 63 aa4.48□□□□□ -1.69
KLHL42-203ENST00000540301 NDUFA12Q9UI09 145 aa4.48□□□□□ -1.69
KLHL42-203ENST00000540301 FLGP20930 4061 aaPredicted RBP4.48□□□□□ -1.69
KLHL42-203ENST00000540301 UMAD1C9J7I0 102 aa4.47□□□□□ -1.69
KLHL42-203ENST00000540301 PDE6DO43924 150 aa4.47□□□□□ -1.69
KLHL42-203ENST00000540301 CFC1P0CG37 223 aa4.47□□□□□ -1.69
KLHL42-203ENST00000540301 TWIST1Q15672 202 aa4.47□□□□□ -1.69
KLHL42-203ENST00000540301 VAMP3Q15836 100 aa4.47□□□□□ -1.69
KLHL42-203ENST00000540301 PDZD11Q5EBL8 140 aa4.47□□□□□ -1.69
KLHL42-203ENST00000540301 TP73-AS1Q9UF72 201 aa4.47□□□□□ -1.69
KLHL42-203ENST00000540301 CSDC2Q9Y534 153 aaKnown RBP4.47□□□□□ -1.69
KLHL42-203ENST00000540301 IGHV3OR16-9A0A0B4J2B5 98 aa4.46□□□□□ -1.7
KLHL42-203ENST00000540301 RPL37AP8A6NKH3 93 aa4.46□□□□□ -1.7
KLHL42-203ENST00000540301 FOXA3P55318 350 aaPredicted RBP4.46□□□□□ -1.7
KLHL42-203ENST00000540301 RPL32P62910 135 aaKnown RBP4.46□□□□□ -1.7
KLHL42-203ENST00000540301 BOD1L2Q8IYS8 172 aa4.46□□□□□ -1.7
KLHL42-203ENST00000540301 RNASE7Q9H1E1 156 aaKnown RBP4.46□□□□□ -1.7
KLHL42-203ENST00000540301 GEMIN7Q9H840 131 aaKnown RBP4.46□□□□□ -1.7
KLHL42-203ENST00000540301 TRBV6-5A0A0K0K1A5 114 aa4.45□□□□□ -1.7
KLHL42-203ENST00000540301 ZNF727A8MUV8 499 aa4.45□□□□□ -1.7
KLHL42-203ENST00000540301 KIAA0087Q14695 138 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms