RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 FAM19A3Q7Z5A8 133 aa9.26□□□□□ -0.93
UBE3B-211ENST00000539843 IGIPA6NJ69 53 aa9.25□□□□□ -0.93
UBE3B-211ENST00000539843 ZC2HC1BQ5TFG8 222 aa9.25□□□□□ -0.93
UBE3B-211ENST00000539843 LINC00173Q6ZV60 143 aa9.25□□□□□ -0.93
UBE3B-211ENST00000539843 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
UBE3B-211ENST00000539843 LINC00469Q8N7U9 141 aa9.24□□□□□ -0.93
UBE3B-211ENST00000539843 CARHSP1Q9Y2V2 147 aaKnown RBP9.24□□□□□ -0.93
UBE3B-211ENST00000539843 ZNF861PO60384 105 aa9.23□□□□□ -0.93
UBE3B-211ENST00000539843 TOMM6Q96B49 74 aa9.23□□□□□ -0.93
UBE3B-211ENST00000539843 SCGB3A1Q96QR1 104 aa9.23□□□□□ -0.93
UBE3B-211ENST00000539843 XAGE1AQ9HD64 81 aa9.23□□□□□ -0.93
UBE3B-211ENST00000539843 CDKN2A-AS1Q9UH64 79 aa9.23□□□□□ -0.93
UBE3B-211ENST00000539843 C22orf24Q9Y442 160 aa9.23□□□□□ -0.93
UBE3B-211ENST00000539843 TRAV9-1A0A075B6T8 112 aa9.22□□□□□ -0.93
UBE3B-211ENST00000539843 S100PP25815 95 aa9.22□□□□□ -0.93
UBE3B-211ENST00000539843 ERASQ7Z444 233 aa9.22□□□□□ -0.93
UBE3B-211ENST00000539843 KRTAP7-1Q8IUC3 87 aa9.22□□□□□ -0.93
UBE3B-211ENST00000539843 RPL28P46779 137 aaKnown RBP9.21□□□□□ -0.94
UBE3B-211ENST00000539843 MRPL55Q7Z7F7 128 aaKnown RBP9.21□□□□□ -0.94
UBE3B-211ENST00000539843 TP73-AS1Q9UF72 201 aa9.21□□□□□ -0.94
UBE3B-211ENST00000539843 KRTAP1-4P0C5Y4 121 aa9.2□□□□□ -0.94
UBE3B-211ENST00000539843 PDZD11Q5EBL8 140 aa9.2□□□□□ -0.94
UBE3B-211ENST00000539843 TINCRA0A1B0GVN0 87 aa9.19□□□□□ -0.94
UBE3B-211ENST00000539843 KIAA1644Q3SXP7 199 aa9.19□□□□□ -0.94
UBE3B-211ENST00000539843 COX7B2Q8TF08 81 aa9.19□□□□□ -0.94
UBE3B-211ENST00000539843 H3BRM9 83 aa9.18□□□□□ -0.94
UBE3B-211ENST00000539843 PRR4Q16378 134 aa9.18□□□□□ -0.94
UBE3B-211ENST00000539843 COX19Q49B96 90 aa9.18□□□□□ -0.94
UBE3B-211ENST00000539843 CLLU1Q5K131 121 aa9.18□□□□□ -0.94
UBE3B-211ENST00000539843 UQCC3Q6UW78 93 aa9.18□□□□□ -0.94
UBE3B-211ENST00000539843 SMCO4Q9NRQ5 59 aa9.18□□□□□ -0.94
UBE3B-211ENST00000539843 FA2HQ7L5A8 372 aa9.17□□□□□ -0.94
UBE3B-211ENST00000539843 NKAPP1Q8N9T2 125 aa9.17□□□□□ -0.94
UBE3B-211ENST00000539843 SMIM1B2RUZ4 78 aa9.16□□□□□ -0.94
UBE3B-211ENST00000539843 BCE1O60756 84 aa9.16□□□□□ -0.94
UBE3B-211ENST00000539843 GNB1LQ9BYB4 327 aa9.16□□□□□ -0.94
UBE3B-211ENST00000539843 MRPL18Q9H0U6 180 aaKnown RBP9.16□□□□□ -0.94
UBE3B-211ENST00000539843 ATP5LO75964 103 aa9.15□□□□□ -0.94
UBE3B-211ENST00000539843 IGLV5-45A0A087WSX0 123 aa9.14□□□□□ -0.95
UBE3B-211ENST00000539843 CRYGAP11844 174 aa9.14□□□□□ -0.95
UBE3B-211ENST00000539843 PMVKQ15126 192 aa9.14□□□□□ -0.95
UBE3B-211ENST00000539843 RNF213Q63HN8 5207 aa9.13□□□□□ -0.95
UBE3B-211ENST00000539843 TMEM218A2RU14 115 aa9.13□□□□□ -0.95
UBE3B-211ENST00000539843 SPINK8P0C7L1 97 aa9.13□□□□□ -0.95
UBE3B-211ENST00000539843 UBE2AP49459 152 aa9.13□□□□□ -0.95
UBE3B-211ENST00000539843 CST9LQ9H4G1 147 aa9.13□□□□□ -0.95
UBE3B-211ENST00000539843 ADCYAP1P18509 176 aa9.12□□□□□ -0.95
UBE3B-211ENST00000539843 RAB5BP61020 215 aa9.12□□□□□ -0.95
UBE3B-211ENST00000539843 LINC00167Q96N53 147 aa9.12□□□□□ -0.95
UBE3B-211ENST00000539843 GAGE10A6NGK3 116 aa9.11□□□□□ -0.95
UBE3B-211ENST00000539843 RPL37AP8A6NKH3 93 aa9.11□□□□□ -0.95
UBE3B-211ENST00000539843 FABP9Q0Z7S8 132 aa9.11□□□□□ -0.95
UBE3B-211ENST00000539843 TYMSOSQ8TAI1 123 aa9.11□□□□□ -0.95
UBE3B-211ENST00000539843 SEC11CQ9BY50 192 aa9.11□□□□□ -0.95
UBE3B-211ENST00000539843 LINC01546A6NGU7 62 aa9.1□□□□□ -0.95
UBE3B-211ENST00000539843 IGLV5-37A0A075B6J1 123 aa9.09□□□□□ -0.95
UBE3B-211ENST00000539843 TSPAN13O95857 204 aa9.09□□□□□ -0.95
UBE3B-211ENST00000539843 NDUFA6P56556 154 aa9.09□□□□□ -0.95
UBE3B-211ENST00000539843 A0A0U1RQV1 116 aa9.08□□□□□ -0.96
UBE3B-211ENST00000539843 SFTA2Q6UW10 78 aa9.08□□□□□ -0.96
UBE3B-211ENST00000539843 PFN2P35080 140 aa9.07□□□□□ -0.96
UBE3B-211ENST00000539843 RPL24P83731 157 aaKnown RBP9.07□□□□□ -0.96
UBE3B-211ENST00000539843 RHEBQ15382 184 aa9.06□□□□□ -0.96
UBE3B-211ENST00000539843 IGKV2-28A0A075B6P5 120 aa9.05□□□□□ -0.96
UBE3B-211ENST00000539843 IGKV2D-28P01615 120 aa9.05□□□□□ -0.96
UBE3B-211ENST00000539843 IGLC3P0DOY3 106 aa9.05□□□□□ -0.96
UBE3B-211ENST00000539843 COX17Q14061 63 aa9.05□□□□□ -0.96
UBE3B-211ENST00000539843 RPS10P5Q9NQ39 176 aa9.05□□□□□ -0.96
UBE3B-211ENST00000539843 A0A087X002 238 aa9.04□□□□□ -0.96
UBE3B-211ENST00000539843 HBDP02042 147 aa9.04□□□□□ -0.96
UBE3B-211ENST00000539843 FAM229BQ4G0N7 80 aa9.04□□□□□ -0.96
UBE3B-211ENST00000539843 ERG28Q9UKR5 140 aa9.04□□□□□ -0.96
UBE3B-211ENST00000539843 IGKV2D-26A0A0A0MRZ7 120 aa9.03□□□□□ -0.96
UBE3B-211ENST00000539843 COMMD7Q86VX2 200 aa9.03□□□□□ -0.96
UBE3B-211ENST00000539843 LPAP08519 4548 aa9.03□□□□□ -0.96
UBE3B-211ENST00000539843 IGLV5-39A0A0G2JS06 123 aa9.02□□□□□ -0.97
UBE3B-211ENST00000539843 FAM19A1Q7Z5A9 133 aa9.02□□□□□ -0.97
UBE3B-211ENST00000539843 TRAPPC1Q9Y5R8 145 aa9.02□□□□□ -0.97
UBE3B-211ENST00000539843 LINC00614P0C842 121 aa9.01□□□□□ -0.97
UBE3B-211ENST00000539843 TMEM170BQ5T4T1 132 aa9.01□□□□□ -0.97
UBE3B-211ENST00000539843 SND1-IT1Q9HBX3 110 aa9.01□□□□□ -0.97
UBE3B-211ENST00000539843 ZNF22P17026 224 aaPredicted RBP9□□□□□ -0.97
UBE3B-211ENST00000539843 LINC00304Q8N9R0 145 aa9□□□□□ -0.97
UBE3B-211ENST00000539843 PRLHP81277 87 aa8.99□□□□□ -0.97
UBE3B-211ENST00000539843 BAGE3Q86Y29 109 aa8.99□□□□□ -0.97
UBE3B-211ENST00000539843 KRTAP13-1Q8IUC0 172 aa8.99□□□□□ -0.97
UBE3B-211ENST00000539843 TMEM126AQ9H061 195 aa8.99□□□□□ -0.97
UBE3B-211ENST00000539843 ATP6V1G1O75348 118 aa8.98□□□□□ -0.97
UBE3B-211ENST00000539843 VPREB1P12018 145 aa8.98□□□□□ -0.97
UBE3B-211ENST00000539843 C18orf32Q8TCD1 76 aa8.98□□□□□ -0.97
UBE3B-211ENST00000539843 ZNF625Q96I27 306 aaPredicted RBP8.98□□□□□ -0.97
UBE3B-211ENST00000539843 ANAPC11Q9NYG5 84 aa8.98□□□□□ -0.97
UBE3B-211ENST00000539843 SCO1O75880 301 aa8.97□□□□□ -0.97
UBE3B-211ENST00000539843 CTAG1AP78358 180 aa8.97□□□□□ -0.97
UBE3B-211ENST00000539843 LINC00158P58513 81 aa8.96□□□□□ -0.98
UBE3B-211ENST00000539843 NDUFA5Q16718 116 aa8.96□□□□□ -0.98
UBE3B-211ENST00000539843 CBLN2Q8IUK8 224 aa8.96□□□□□ -0.98
UBE3B-211ENST00000539843 A0A096LNJ9 63 aa8.95□□□□□ -0.98
UBE3B-211ENST00000539843 C11orf86A6NJI1 115 aa8.95□□□□□ -0.98
UBE3B-211ENST00000539843 TMEM238C9JI98 176 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms