RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 C1orf43Q9BWL3 253 aa13.7□□□□□ -0.22
CDH5-202ENST00000539168 A4D1N5 150 aa13.69□□□□□ -0.22
CDH5-202ENST00000539168 A0A0B4J2C4 111 aa13.69□□□□□ -0.22
CDH5-202ENST00000539168 DNAH9Q9NYC9 4486 aa13.68□□□□□ -0.22
CDH5-202ENST00000539168 K7ERJ3 54 aa13.68□□□□□ -0.22
CDH5-202ENST00000539168 KIAA0087Q14695 138 aa13.68□□□□□ -0.22
CDH5-202ENST00000539168 H3BUT2 72 aa13.66□□□□□ -0.22
CDH5-202ENST00000539168 CFC1BP0CG36 223 aa13.66□□□□□ -0.22
CDH5-202ENST00000539168 CFC1P0CG37 223 aa13.66□□□□□ -0.22
CDH5-202ENST00000539168 VAMP3Q15836 100 aa13.66□□□□□ -0.22
CDH5-202ENST00000539168 LINC00308Q8TCZ7 52 aa13.66□□□□□ -0.22
CDH5-202ENST00000539168 RMI2Q96E14 147 aa13.66□□□□□ -0.22
CDH5-202ENST00000539168 APLNQ9ULZ1 77 aa13.66□□□□□ -0.22
CDH5-202ENST00000539168 SPAG11BQ08648 103 aa13.66□□□□□ -0.22
CDH5-202ENST00000539168 COX17Q14061 63 aa13.66□□□□□ -0.22
CDH5-202ENST00000539168 PRO1854Q9UHT4 67 aa13.65□□□□□ -0.22
CDH5-202ENST00000539168 ERG28Q9UKR5 140 aa13.65□□□□□ -0.22
CDH5-202ENST00000539168 LINC00158P58513 81 aa13.64□□□□□ -0.23
CDH5-202ENST00000539168 KRTAP26-1Q6PEX3 210 aa13.64□□□□□ -0.23
CDH5-202ENST00000539168 MUC7Q8TAX7 377 aa13.64□□□□□ -0.23
CDH5-202ENST00000539168 FABP2P12104 132 aa13.63□□□□□ -0.23
CDH5-202ENST00000539168 A0A1W2PPM0 123 aa13.63□□□□□ -0.23
CDH5-202ENST00000539168 IGKV2D-24A0A075B6R9 120 aa13.62□□□□□ -0.23
CDH5-202ENST00000539168 A0A0U1RRA0 63 aa13.62□□□□□ -0.23
CDH5-202ENST00000539168 F8WDY8 70 aa13.62□□□□□ -0.23
CDH5-202ENST00000539168 DAND5Q8N907 189 aa13.62□□□□□ -0.23
CDH5-202ENST00000539168 GTF2H5Q6ZYL4 71 aa13.61□□□□□ -0.23
CDH5-202ENST00000539168 UBE2DNLQ8IWF7 75 aa13.61□□□□□ -0.23
CDH5-202ENST00000539168 MIR7-3HGQ8N6C7 128 aa13.61□□□□□ -0.23
CDH5-202ENST00000539168 PGPEP1Q9NXJ5 209 aa13.61□□□□□ -0.23
CDH5-202ENST00000539168 LYRM7Q5U5X0 104 aa13.6□□□□□ -0.23
CDH5-202ENST00000539168 UBE2V1Q13404 147 aa13.59□□□□□ -0.23
CDH5-202ENST00000539168 C2orf82Q6UX34 121 aa13.59□□□□□ -0.23
CDH5-202ENST00000539168 ZNF561-AS1K7EIQ3 104 aa13.59□□□□□ -0.23
CDH5-202ENST00000539168 NPC2P61916 151 aa13.59□□□□□ -0.23
CDH5-202ENST00000539168 PFN2P35080 140 aa13.58□□□□□ -0.24
CDH5-202ENST00000539168 STAB2Q8WWQ8 2551 aa13.58□□□□□ -0.24
CDH5-202ENST00000539168 GVQW2A0A096LPI5 108 aaPredicted RBP13.57□□□□□ -0.24
CDH5-202ENST00000539168 NTN5Q8WTR8 489 aaPredicted RBP13.57□□□□□ -0.24
CDH5-202ENST00000539168 C2orf48Q96LS8 159 aa13.57□□□□□ -0.24
CDH5-202ENST00000539168 GAGE10A6NGK3 116 aa13.56□□□□□ -0.24
CDH5-202ENST00000539168 TSPAN13O95857 204 aa13.56□□□□□ -0.24
CDH5-202ENST00000539168 Q9HAA7 133 aa13.56□□□□□ -0.24
CDH5-202ENST00000539168 SOSTDC1Q6X4U4 206 aa13.55□□□□□ -0.24
CDH5-202ENST00000539168 NAA38Q9BRA0 125 aaKnown RBP13.55□□□□□ -0.24
CDH5-202ENST00000539168 SPCS1Q9Y6A9 102 aa13.55□□□□□ -0.24
CDH5-202ENST00000539168 LOC107984156A0A0G2JMH3 177 aa13.54□□□□□ -0.24
CDH5-202ENST00000539168 TRBV30A0A0K0K1B3 111 aa13.54□□□□□ -0.24
CDH5-202ENST00000539168 K7EP34 96 aa13.54□□□□□ -0.24
CDH5-202ENST00000539168 ARL17AQ8IVW1 177 aa13.54□□□□□ -0.24
CDH5-202ENST00000539168 SND1-IT1Q9HBX3 110 aa13.53□□□□□ -0.24
CDH5-202ENST00000539168 EIF4EBP3O60516 100 aaPredicted RBP13.52□□□□□ -0.25
CDH5-202ENST00000539168 UNQ6190/PRO20217Q6UXQ8 127 aa13.52□□□□□ -0.25
CDH5-202ENST00000539168 C15orf56Q8N910 161 aa13.52□□□□□ -0.25
CDH5-202ENST00000539168 DNHD1Q96M86 4753 aa13.52□□□□□ -0.25
CDH5-202ENST00000539168 TRAV13-2A0A0B4J235 113 aa13.51□□□□□ -0.25
CDH5-202ENST00000539168 Q1RN00 199 aa13.51□□□□□ -0.25
CDH5-202ENST00000539168 C6orf223Q8N319 242 aa13.51□□□□□ -0.25
CDH5-202ENST00000539168 CAMK2N2Q96S95 79 aa13.51□□□□□ -0.25
CDH5-202ENST00000539168 COL7A1Q02388 2944 aa13.51□□□□□ -0.25
CDH5-202ENST00000539168 TTC32Q5I0X7 151 aa13.5□□□□□ -0.25
CDH5-202ENST00000539168 PSMB2P49721 201 aa13.48□□□□□ -0.25
CDH5-202ENST00000539168 HIGD2BQ4VC39 106 aa13.48□□□□□ -0.25
CDH5-202ENST00000539168 TRBV20-1A0A075B6N2 111 aa13.47□□□□□ -0.25
CDH5-202ENST00000539168 NDUFC2O95298 119 aa13.47□□□□□ -0.25
CDH5-202ENST00000539168 RPL13AP40429 203 aaKnown RBP13.47□□□□□ -0.25
CDH5-202ENST00000539168 C10orf25Q5T742 122 aa13.47□□□□□ -0.25
CDH5-202ENST00000539168 COX6CP09669 75 aa13.47□□□□□ -0.25
CDH5-202ENST00000539168 LINC00526Q96FQ7 95 aa13.47□□□□□ -0.25
CDH5-202ENST00000539168 SCGB1C2P0DMR2 95 aa13.46□□□□□ -0.26
CDH5-202ENST00000539168 C6orf48Q9UBA6 75 aa13.46□□□□□ -0.26
CDH5-202ENST00000539168 H7C2G1 150 aa13.45□□□□□ -0.26
CDH5-202ENST00000539168 DYNC2H1Q8NCM8 4307 aaKnown RBP13.44□□□□□ -0.26
CDH5-202ENST00000539168 C9orf116Q5BN46 136 aaPredicted RBP13.44□□□□□ -0.26
CDH5-202ENST00000539168 SYCNQ0VAF6 134 aa13.44□□□□□ -0.26
CDH5-202ENST00000539168 RNF151Q2KHN1 245 aa13.43□□□□□ -0.26
CDH5-202ENST00000539168 USP17L23D6RBM5 183 aa13.42□□□□□ -0.26
CDH5-202ENST00000539168 Q6ZRU5 148 aa13.41□□□□□ -0.26
CDH5-202ENST00000539168 MEGF8Q7Z7M0 2845 aa13.41□□□□□ -0.26
CDH5-202ENST00000539168 IGKV2-28A0A075B6P5 120 aa13.4□□□□□ -0.26
CDH5-202ENST00000539168 IGKV2D-28P01615 120 aa13.4□□□□□ -0.26
CDH5-202ENST00000539168 NBDYA0A0U1RRE5 68 aa13.39□□□□□ -0.27
CDH5-202ENST00000539168 PRKDCP78527 4128 aaKnown RBP13.39□□□□□ -0.27
CDH5-202ENST00000539168 NDUFC2-KCTD14E9PQ53 114 aa13.38□□□□□ -0.27
CDH5-202ENST00000539168 TRIAP1O43715 76 aa13.38□□□□□ -0.27
CDH5-202ENST00000539168 KRTAP1-5Q9BYS1 174 aa13.38□□□□□ -0.27
CDH5-202ENST00000539168 PSCAO43653 123 aa13.37□□□□□ -0.27
CDH5-202ENST00000539168 LINC00337Q8N6G1 96 aa13.37□□□□□ -0.27
CDH5-202ENST00000539168 CARD19Q96LW7 228 aa13.37□□□□□ -0.27
CDH5-202ENST00000539168 C14orf177Q52M58 125 aa13.37□□□□□ -0.27
CDH5-202ENST00000539168 F8W1H4 67 aa13.35□□□□□ -0.27
CDH5-202ENST00000539168 RPL28P46779 137 aaKnown RBP13.35□□□□□ -0.27
CDH5-202ENST00000539168 ATXN8Q156A1 80 aa13.35□□□□□ -0.27
CDH5-202ENST00000539168 H3BMG7 143 aa13.34□□□□□ -0.27
CDH5-202ENST00000539168 TCL1BO95988 128 aa13.34□□□□□ -0.27
CDH5-202ENST00000539168 TLX1NBP0CAT3 122 aa13.34□□□□□ -0.27
CDH5-202ENST00000539168 WWC2-AS2Q96NR7 200 aa13.34□□□□□ -0.27
CDH5-202ENST00000539168 TRBV10-2A0A0K0K1G8 114 aa13.34□□□□□ -0.27
CDH5-202ENST00000539168 CASC10Q5T4H9 136 aa13.34□□□□□ -0.27
CDH5-202ENST00000539168 TMEM126AQ9H061 195 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms