RNA–Protein interactions for RNA: ENST00000538261.7

CLDN7-203, Transcript of claudin 7, humanhuman

TSL 5 BASIC

Gene CLDN7, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-203ENST00000538261 TRBV7-7A0A0K0K1E9 115 aa12.15□□□□□ -0.46
CLDN7-203ENST00000538261 ATP5G1P05496 136 aa12.15□□□□□ -0.46
CLDN7-203ENST00000538261 TENM3Q9P273 2699 aa12.14□□□□□ -0.47
CLDN7-203ENST00000538261 TMEM101Q96IK0 257 aa12.14□□□□□ -0.47
CLDN7-203ENST00000538261 TM2D3Q9BRN9 247 aa12.14□□□□□ -0.47
CLDN7-203ENST00000538261 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.13□□□□□ -0.47
CLDN7-203ENST00000538261 IGKV2-29A2NJV5 120 aaPredicted RBP12.13□□□□□ -0.47
CLDN7-203ENST00000538261 CCDC179H3BU77 68 aa12.13□□□□□ -0.47
CLDN7-203ENST00000538261 FAM19A3Q7Z5A8 133 aa12.13□□□□□ -0.47
CLDN7-203ENST00000538261 CDKN2A-AS1Q9UH64 79 aa12.13□□□□□ -0.47
CLDN7-203ENST00000538261 IGLV5-39A0A0G2JS06 123 aa12.13□□□□□ -0.47
CLDN7-203ENST00000538261 GYPEP15421 78 aa12.13□□□□□ -0.47
CLDN7-203ENST00000538261 NPC2P61916 151 aa12.13□□□□□ -0.47
CLDN7-203ENST00000538261 HERVK_113P63121 156 aa12.13□□□□□ -0.47
CLDN7-203ENST00000538261 PPDPFQ9H3Y8 114 aa12.13□□□□□ -0.47
CLDN7-203ENST00000538261 DNHD1Q96M86 4753 aa12.12□□□□□ -0.47
CLDN7-203ENST00000538261 COX7A2LO14548 114 aa12.12□□□□□ -0.47
CLDN7-203ENST00000538261 LINC00308Q8TCZ7 52 aa12.12□□□□□ -0.47
CLDN7-203ENST00000538261 IMUPQ9GZP8 106 aa12.12□□□□□ -0.47
CLDN7-203ENST00000538261 HUWE1Q7Z6Z7 4374 aaKnown RBP12.11□□□□□ -0.47
CLDN7-203ENST00000538261 A0A0J9YWU9 116 aa12.11□□□□□ -0.47
CLDN7-203ENST00000538261 PAX4O43316 350 aa12.11□□□□□ -0.47
CLDN7-203ENST00000538261 DGAT2L7PQ6IED9 249 aa12.1□□□□□ -0.47
CLDN7-203ENST00000538261 MRAPQ8TCY5 172 aa12.09□□□□□ -0.47
CLDN7-203ENST00000538261 F5H768 121 aa12.09□□□□□ -0.47
CLDN7-203ENST00000538261 TRACP01848 142 aa12.07□□□□□ -0.48
CLDN7-203ENST00000538261 HTN3P15516 51 aa12.07□□□□□ -0.48
CLDN7-203ENST00000538261 Q9H8V8 135 aa12.07□□□□□ -0.48
CLDN7-203ENST00000538261 CSDC2Q9Y534 153 aaKnown RBP12.07□□□□□ -0.48
CLDN7-203ENST00000538261 TRBV6-8A0A0A6YYG3 113 aa12.07□□□□□ -0.48
CLDN7-203ENST00000538261 Q6ZTC4 211 aa12.06□□□□□ -0.48
CLDN7-203ENST00000538261 DAND5Q8N907 189 aa12.06□□□□□ -0.48
CLDN7-203ENST00000538261 TMEM243Q9BU79 118 aa12.06□□□□□ -0.48
CLDN7-203ENST00000538261 HERV-K104P63124 156 aa12.05□□□□□ -0.48
CLDN7-203ENST00000538261 COX6A2Q02221 97 aa12.05□□□□□ -0.48
CLDN7-203ENST00000538261 KRTAP21-3Q3LHN1 58 aa12.05□□□□□ -0.48
CLDN7-203ENST00000538261 LINC00242Q5T6M2 205 aa12.05□□□□□ -0.48
CLDN7-203ENST00000538261 A0A096LPF7 62 aa12.03□□□□□ -0.48
CLDN7-203ENST00000538261 MEIG1Q5JSS6 88 aa12.03□□□□□ -0.48
CLDN7-203ENST00000538261 LINC00643Q86TS7 51 aa12.03□□□□□ -0.48
CLDN7-203ENST00000538261 SMIM1B2RUZ4 78 aa12.03□□□□□ -0.48
CLDN7-203ENST00000538261 NANOS2P60321 138 aaKnown RBP12.03□□□□□ -0.48
CLDN7-203ENST00000538261 C11orf45Q8TAV5 145 aa12.03□□□□□ -0.48
CLDN7-203ENST00000538261 TMEM126AQ9H061 195 aa12.03□□□□□ -0.48
CLDN7-203ENST00000538261 SDIM1Q6ZPB5 146 aa12.02□□□□□ -0.49
CLDN7-203ENST00000538261 ZNF625Q96I27 306 aaPredicted RBP12.02□□□□□ -0.49
CLDN7-203ENST00000538261 DNAH9Q9NYC9 4486 aa12.02□□□□□ -0.49
CLDN7-203ENST00000538261 UBE2L6O14933 153 aa12.01□□□□□ -0.49
CLDN7-203ENST00000538261 SOSTDC1Q6X4U4 206 aa12.01□□□□□ -0.49
CLDN7-203ENST00000538261 H3BNG1 76 aa11.99□□□□□ -0.49
CLDN7-203ENST00000538261 BAALC-AS2P0C853 105 aa11.99□□□□□ -0.49
CLDN7-203ENST00000538261 CHCHD5Q9BSY4 110 aa11.99□□□□□ -0.49
CLDN7-203ENST00000538261 INAFM2P0DMQ5 153 aa11.99□□□□□ -0.49
CLDN7-203ENST00000538261 CXCL5P42830 114 aa11.99□□□□□ -0.49
CLDN7-203ENST00000538261 CDC42SE2Q9NRR3 84 aa11.99□□□□□ -0.49
CLDN7-203ENST00000538261 TRAV13-2A0A0B4J235 113 aa11.98□□□□□ -0.49
CLDN7-203ENST00000538261 B9D2Q9BPU9 175 aa11.98□□□□□ -0.49
CLDN7-203ENST00000538261 IGLV4-60A0A075B6I1 120 aa11.96□□□□□ -0.5
CLDN7-203ENST00000538261 DEFB131BA0A096LNP1 70 aa11.96□□□□□ -0.5
CLDN7-203ENST00000538261 FAM236AA0A1B0GUQ0 79 aa11.96□□□□□ -0.5
CLDN7-203ENST00000538261 FAM236BA0A1B0GV22 79 aa11.96□□□□□ -0.5
CLDN7-203ENST00000538261 RPL28P46779 137 aaKnown RBP11.96□□□□□ -0.5
CLDN7-203ENST00000538261 TRAV13-1A0A0B4J241 112 aa11.94□□□□□ -0.5
CLDN7-203ENST00000538261 A0A0U1RRA0 63 aa11.94□□□□□ -0.5
CLDN7-203ENST00000538261 SMCR5Q8TEV8 140 aa11.94□□□□□ -0.5
CLDN7-203ENST00000538261 SMIM20Q8N5G0 67 aa11.94□□□□□ -0.5
CLDN7-203ENST00000538261 C22orf24Q9Y442 160 aa11.94□□□□□ -0.5
CLDN7-203ENST00000538261 C5orf38Q86SI9 138 aa11.93□□□□□ -0.5
CLDN7-203ENST00000538261 A0A1B0GUV1 79 aa11.92□□□□□ -0.5
CLDN7-203ENST00000538261 LELP1Q5T871 98 aa11.92□□□□□ -0.5
CLDN7-203ENST00000538261 MALP21145 153 aa11.92□□□□□ -0.5
CLDN7-203ENST00000538261 LYPD5Q6UWN5 251 aa11.92□□□□□ -0.5
CLDN7-203ENST00000538261 C3orf22Q8N5N4 141 aa11.92□□□□□ -0.5
CLDN7-203ENST00000538261 TRAV10A0A0B4J240 114 aa11.91□□□□□ -0.5
CLDN7-203ENST00000538261 CRPP02741 224 aa11.91□□□□□ -0.5
CLDN7-203ENST00000538261 FAM218AQ96MZ4 157 aa11.91□□□□□ -0.5
CLDN7-203ENST00000538261 COL7A1Q02388 2944 aa11.9□□□□□ -0.5
CLDN7-203ENST00000538261 UQCRQO14949 82 aa11.9□□□□□ -0.5
CLDN7-203ENST00000538261 PRKDCP78527 4128 aaKnown RBP11.9□□□□□ -0.51
CLDN7-203ENST00000538261 Q8N3U1 123 aa11.89□□□□□ -0.51
CLDN7-203ENST00000538261 H0YGX0 51 aa11.88□□□□□ -0.51
CLDN7-203ENST00000538261 COX7B2Q8TF08 81 aa11.88□□□□□ -0.51
CLDN7-203ENST00000538261 LINC00526Q96FQ7 95 aa11.88□□□□□ -0.51
CLDN7-203ENST00000538261 STAB2Q8WWQ8 2551 aa11.87□□□□□ -0.51
CLDN7-203ENST00000538261 C9orf153Q5TBE3 101 aa11.86□□□□□ -0.51
CLDN7-203ENST00000538261 SND1-IT1Q9HBX3 110 aa11.86□□□□□ -0.51
CLDN7-203ENST00000538261 GAGE2AQ6NT46 116 aa11.86□□□□□ -0.51
CLDN7-203ENST00000538261 DNAL4O96015 105 aa11.85□□□□□ -0.51
CLDN7-203ENST00000538261 MIR7-3HGQ8N6C7 128 aa11.85□□□□□ -0.51
CLDN7-203ENST00000538261 LINC00337Q8N6G1 96 aa11.85□□□□□ -0.51
CLDN7-203ENST00000538261 IGKV2-28A0A075B6P5 120 aa11.84□□□□□ -0.51
CLDN7-203ENST00000538261 IGKV3OR2-268A0A0C4DH90 116 aa11.84□□□□□ -0.51
CLDN7-203ENST00000538261 IGKV2D-28P01615 120 aa11.84□□□□□ -0.51
CLDN7-203ENST00000538261 HIST1H4AP62805 103 aaKnown RBP11.84□□□□□ -0.51
CLDN7-203ENST00000538261 ESRGQ1W209 222 aa11.84□□□□□ -0.51
CLDN7-203ENST00000538261 OBSCN-AS1Q96MR7 158 aa11.84□□□□□ -0.51
CLDN7-203ENST00000538261 LINC00959A0A1B0GUT2 108 aa11.83□□□□□ -0.52
CLDN7-203ENST00000538261 IBA57-AS1B1ANH7 110 aa11.83□□□□□ -0.52
CLDN7-203ENST00000538261 ATOX1O00244 68 aa11.83□□□□□ -0.52
CLDN7-203ENST00000538261 Q9HAA7 133 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms