RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 LEPROTL1O95214 131 aa8.42□□□□□ -1.06
CHFR-216ENST00000538235 HBDP02042 147 aa8.42□□□□□ -1.06
CHFR-216ENST00000538235 CNBPP62633 177 aaKnown RBP8.42□□□□□ -1.06
CHFR-216ENST00000538235 KRTAP4-5Q9BYR2 181 aa8.42□□□□□ -1.06
CHFR-216ENST00000538235 IGHV1-58A0A0C4DH39 117 aa8.41□□□□□ -1.06
CHFR-216ENST00000538235 COX7A2LO14548 114 aa8.41□□□□□ -1.06
CHFR-216ENST00000538235 HINT1P49773 126 aaPredicted RBP8.41□□□□□ -1.06
CHFR-216ENST00000538235 C9orf163Q8N9P6 203 aa8.41□□□□□ -1.06
CHFR-216ENST00000538235 VPS13BQ7Z7G8 4022 aa8.4□□□□□ -1.06
CHFR-216ENST00000538235 IGLV4-69A0A075B6H9 119 aa8.4□□□□□ -1.06
CHFR-216ENST00000538235 SYS1-DBNDD2H3BUS1 97 aa8.4□□□□□ -1.06
CHFR-216ENST00000538235 CDK2AP2O75956 126 aa8.4□□□□□ -1.06
CHFR-216ENST00000538235 KIAA0087Q14695 138 aa8.4□□□□□ -1.06
CHFR-216ENST00000538235 C14orf177Q52M58 125 aa8.4□□□□□ -1.06
CHFR-216ENST00000538235 VPS25Q9BRG1 176 aa8.4□□□□□ -1.06
CHFR-216ENST00000538235 VCX2Q9H322 139 aa8.4□□□□□ -1.06
CHFR-216ENST00000538235 CST9LQ9H4G1 147 aa8.4□□□□□ -1.06
CHFR-216ENST00000538235 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.4□□□□□ -1.06
CHFR-216ENST00000538235 IGHV3-64A0A075B6Q5 118 aa8.39□□□□□ -1.07
CHFR-216ENST00000538235 A0A087WZ39 114 aa8.39□□□□□ -1.07
CHFR-216ENST00000538235 CHTF8P0CG12 524 aa8.39□□□□□ -1.07
CHFR-216ENST00000538235 CDKN2A-AS1Q9UH64 79 aa8.39□□□□□ -1.07
CHFR-216ENST00000538235 OCIAD2Q56VL3 154 aa8.38□□□□□ -1.07
CHFR-216ENST00000538235 C10orf25Q5T742 122 aa8.38□□□□□ -1.07
CHFR-216ENST00000538235 SDIM1Q6ZPB5 146 aa8.38□□□□□ -1.07
CHFR-216ENST00000538235 Q6ZRU5 148 aa8.38□□□□□ -1.07
CHFR-216ENST00000538235 IGLV5-45A0A087WSX0 123 aa8.37□□□□□ -1.07
CHFR-216ENST00000538235 SPAG11BQ08648 103 aa8.37□□□□□ -1.07
CHFR-216ENST00000538235 PMVKQ15126 192 aa8.37□□□□□ -1.07
CHFR-216ENST00000538235 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.36□□□□□ -1.07
CHFR-216ENST00000538235 BVES-AS1Q5T3Y7 98 aa8.36□□□□□ -1.07
CHFR-216ENST00000538235 SCXQ7RTU7 201 aa8.36□□□□□ -1.07
CHFR-216ENST00000538235 GAGE10A6NGK3 116 aa8.35□□□□□ -1.07
CHFR-216ENST00000538235 C11orf86A6NJI1 115 aa8.35□□□□□ -1.07
CHFR-216ENST00000538235 SMIM1B2RUZ4 78 aa8.35□□□□□ -1.07
CHFR-216ENST00000538235 H3BRM9 83 aa8.35□□□□□ -1.07
CHFR-216ENST00000538235 J3QR89 54 aa8.35□□□□□ -1.07
CHFR-216ENST00000538235 COX8AP10176 69 aa8.35□□□□□ -1.07
CHFR-216ENST00000538235 SCGB1A1P11684 91 aa8.35□□□□□ -1.07
CHFR-216ENST00000538235 MALP21145 153 aa8.35□□□□□ -1.07
CHFR-216ENST00000538235 CFAP161Q6P656 301 aa8.35□□□□□ -1.07
CHFR-216ENST00000538235 C2orf82Q6UX34 121 aa8.35□□□□□ -1.07
CHFR-216ENST00000538235 A0A096LNI7 61 aa8.34□□□□□ -1.07
CHFR-216ENST00000538235 TINCRA0A1B0GVN0 87 aa8.34□□□□□ -1.07
CHFR-216ENST00000538235 ZNF22P17026 224 aaPredicted RBP8.34□□□□□ -1.07
CHFR-216ENST00000538235 CIRBPQ14011 172 aaKnown RBP8.34□□□□□ -1.07
CHFR-216ENST00000538235 LINC01545Q5VT33 79 aa8.34□□□□□ -1.07
CHFR-216ENST00000538235 CARD19Q96LW7 228 aa8.34□□□□□ -1.07
CHFR-216ENST00000538235 CHAC1Q9BUX1 264 aa8.34□□□□□ -1.07
CHFR-216ENST00000538235 PKHD1L1Q86WI1 4243 aa8.33□□□□□ -1.08
CHFR-216ENST00000538235 LINC01549A6NIU2 74 aa8.33□□□□□ -1.08
CHFR-216ENST00000538235 TAX1BP3O14907 124 aa8.33□□□□□ -1.08
CHFR-216ENST00000538235 SPINK8P0C7L1 97 aa8.33□□□□□ -1.08
CHFR-216ENST00000538235 HSD52Q0P140 79 aa8.33□□□□□ -1.08
CHFR-216ENST00000538235 SYCNQ0VAF6 134 aa8.33□□□□□ -1.08
CHFR-216ENST00000538235 PAPPA-AS1Q5QFB9 102 aa8.33□□□□□ -1.08
CHFR-216ENST00000538235 UNQ6190/PRO20217Q6UXQ8 127 aa8.33□□□□□ -1.08
CHFR-216ENST00000538235 IFI27L1Q96BM0 104 aa8.33□□□□□ -1.08
CHFR-216ENST00000538235 C6orf48Q9UBA6 75 aa8.33□□□□□ -1.08
CHFR-216ENST00000538235 CHTOPQ9Y3Y2 248 aaKnown RBP8.33□□□□□ -1.08
CHFR-216ENST00000538235 PCLOQ9Y6V0 5065 aa8.32□□□□□ -1.08
CHFR-216ENST00000538235 ZNF561-AS1K7EIQ3 104 aa8.32□□□□□ -1.08
CHFR-216ENST00000538235 ATP5LO75964 103 aa8.32□□□□□ -1.08
CHFR-216ENST00000538235 SMR3BP02814 79 aaPredicted RBP8.32□□□□□ -1.08
CHFR-216ENST00000538235 HERVK_113P63121 156 aa8.32□□□□□ -1.08
CHFR-216ENST00000538235 C21orf62-AS1Q17RA5 79 aa8.32□□□□□ -1.08
CHFR-216ENST00000538235 RNF151Q2KHN1 245 aa8.32□□□□□ -1.08
CHFR-216ENST00000538235 LINC01561Q8N1V8 128 aa8.32□□□□□ -1.08
CHFR-216ENST00000538235 CIRBP-AS1Q8TBR5 109 aa8.32□□□□□ -1.08
CHFR-216ENST00000538235 C2orf48Q96LS8 159 aa8.32□□□□□ -1.08
CHFR-216ENST00000538235 ODF1Q14990 250 aa8.31□□□□□ -1.08
CHFR-216ENST00000538235 SPACA4Q8TDM5 124 aa8.31□□□□□ -1.08
CHFR-216ENST00000538235 CAMK2N2Q96S95 79 aa8.31□□□□□ -1.08
CHFR-216ENST00000538235 GEMIN7Q9H840 131 aaKnown RBP8.31□□□□□ -1.08
CHFR-216ENST00000538235 MRPL35Q9NZE8 188 aaKnown RBP8.31□□□□□ -1.08
CHFR-216ENST00000538235 C9orf118A6NHY6 69 aa8.3□□□□□ -1.08
CHFR-216ENST00000538235 APOMO95445 188 aa8.3□□□□□ -1.08
CHFR-216ENST00000538235 C9orf116Q5BN46 136 aaPredicted RBP8.3□□□□□ -1.08
CHFR-216ENST00000538235 BOD1L2Q8IYS8 172 aa8.3□□□□□ -1.08
CHFR-216ENST00000538235 MTURNQ8N3F0 131 aa8.3□□□□□ -1.08
CHFR-216ENST00000538235 TRAV12-1A0A0B4J245 112 aa8.29□□□□□ -1.08
CHFR-216ENST00000538235 IGKV2-24A0A0C4DH68 120 aa8.29□□□□□ -1.08
CHFR-216ENST00000538235 IGLV5-39A0A0G2JS06 123 aa8.29□□□□□ -1.08
CHFR-216ENST00000538235 ATOH7Q8N100 152 aa8.29□□□□□ -1.08
CHFR-216ENST00000538235 TOMM7Q9P0U1 55 aa8.29□□□□□ -1.08
CHFR-216ENST00000538235 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.28□□□□□ -1.08
CHFR-216ENST00000538235 H0Y8G0 127 aa8.28□□□□□ -1.08
CHFR-216ENST00000538235 KRTAP10-4P60372 401 aaPredicted RBP8.28□□□□□ -1.08
CHFR-216ENST00000538235 Q8IZM0 81 aa8.28□□□□□ -1.08
CHFR-216ENST00000538235 Q8N1X5 172 aa8.28□□□□□ -1.08
CHFR-216ENST00000538235 HIGD1BQ9P298 99 aa8.28□□□□□ -1.08
CHFR-216ENST00000538235 F8VRH5 84 aa8.27□□□□□ -1.09
CHFR-216ENST00000538235 K7EP34 96 aa8.27□□□□□ -1.09
CHFR-216ENST00000538235 FABP2P12104 132 aa8.27□□□□□ -1.09
CHFR-216ENST00000538235 KRTAP7-1Q8IUC3 87 aa8.27□□□□□ -1.09
CHFR-216ENST00000538235 A0A087WYN8 130 aa8.26□□□□□ -1.09
CHFR-216ENST00000538235 NDUFA1O15239 70 aa8.26□□□□□ -1.09
CHFR-216ENST00000538235 TAL2Q16559 108 aa8.26□□□□□ -1.09
CHFR-216ENST00000538235 Q6ZRP5 223 aa8.26□□□□□ -1.09
CHFR-216ENST00000538235 TMEM223A0PJW6 202 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms