RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 MT3P25713 68 aa3.85□□□□□ -1.79
DDB1-210ENST00000538129 FUSP35637 526 aaKnown RBP eCLIP3.85□□□□□ -1.79
DDB1-210ENST00000538129 TEX43Q6ZNM6 134 aa3.85□□□□□ -1.79
DDB1-210ENST00000538129 CHCHD1Q96BP2 118 aaKnown RBP3.85□□□□□ -1.79
DDB1-210ENST00000538129 C2orf88Q9BSF0 95 aa3.85□□□□□ -1.79
DDB1-210ENST00000538129 A0A087WZ39 114 aa3.84□□□□□ -1.79
DDB1-210ENST00000538129 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.84□□□□□ -1.79
DDB1-210ENST00000538129 H0Y8G0 127 aa3.84□□□□□ -1.79
DDB1-210ENST00000538129 APOMO95445 188 aa3.84□□□□□ -1.79
DDB1-210ENST00000538129 UBE2D1P51668 147 aa3.84□□□□□ -1.79
DDB1-210ENST00000538129 KRTAP10-1P60331 282 aa3.84□□□□□ -1.79
DDB1-210ENST00000538129 CNBPP62633 177 aaKnown RBP3.84□□□□□ -1.79
DDB1-210ENST00000538129 SEC11AP67812 179 aa3.84□□□□□ -1.79
DDB1-210ENST00000538129 LINC00242Q5T6M2 205 aa3.84□□□□□ -1.79
DDB1-210ENST00000538129 FAM19A3Q7Z5A8 133 aa3.84□□□□□ -1.79
DDB1-210ENST00000538129 BAGE3Q86Y29 109 aa3.84□□□□□ -1.79
DDB1-210ENST00000538129 C15orf56Q8N910 161 aa3.84□□□□□ -1.79
DDB1-210ENST00000538129 C9orf163Q8N9P6 203 aa3.84□□□□□ -1.79
DDB1-210ENST00000538129 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.83□□□□□ -1.8
DDB1-210ENST00000538129 SCO1O75880 301 aa3.83□□□□□ -1.8
DDB1-210ENST00000538129 ATP5LO75964 103 aa3.83□□□□□ -1.8
DDB1-210ENST00000538129 HBDP02042 147 aa3.83□□□□□ -1.8
DDB1-210ENST00000538129 PMVKQ15126 192 aa3.83□□□□□ -1.8
DDB1-210ENST00000538129 PDZD11Q5EBL8 140 aa3.83□□□□□ -1.8
DDB1-210ENST00000538129 LINC00173Q6ZV60 143 aa3.83□□□□□ -1.8
DDB1-210ENST00000538129 C5orf38Q86SI9 138 aa3.83□□□□□ -1.8
DDB1-210ENST00000538129 LINC01561Q8N1V8 128 aa3.83□□□□□ -1.8
DDB1-210ENST00000538129 CST9LQ9H4G1 147 aa3.83□□□□□ -1.8
DDB1-210ENST00000538129 FAT1Q14517 4588 aa3.82□□□□□ -1.8
DDB1-210ENST00000538129 HSPG2P98160 4391 aa3.82□□□□□ -1.8
DDB1-210ENST00000538129 IGHV3-64A0A075B6Q5 118 aa3.82□□□□□ -1.8
DDB1-210ENST00000538129 A0A096LNJ9 63 aa3.82□□□□□ -1.8
DDB1-210ENST00000538129 HERVK_113P63121 156 aa3.82□□□□□ -1.8
DDB1-210ENST00000538129 COX6A2Q02221 97 aa3.82□□□□□ -1.8
DDB1-210ENST00000538129 LINC01620Q4KN68 170 aa3.82□□□□□ -1.8
DDB1-210ENST00000538129 HIGD2BQ4VC39 106 aa3.82□□□□□ -1.8
DDB1-210ENST00000538129 ZC2HC1BQ5TFG8 222 aa3.82□□□□□ -1.8
DDB1-210ENST00000538129 SDIM1Q6ZPB5 146 aa3.82□□□□□ -1.8
DDB1-210ENST00000538129 OR10D4PQ8NGN7 298 aa3.82□□□□□ -1.8
DDB1-210ENST00000538129 C2orf48Q96LS8 159 aa3.82□□□□□ -1.8
DDB1-210ENST00000538129 IGLV4-69A0A075B6H9 119 aa3.81□□□□□ -1.8
DDB1-210ENST00000538129 TINCRA0A1B0GVN0 87 aa3.81□□□□□ -1.8
DDB1-210ENST00000538129 HSBP1O75506 76 aa3.81□□□□□ -1.8
DDB1-210ENST00000538129 XGP55808 180 aa3.81□□□□□ -1.8
DDB1-210ENST00000538129 PMCHL1Q16048 86 aa3.81□□□□□ -1.8
DDB1-210ENST00000538129 Q6ZSA8 131 aa3.81□□□□□ -1.8
DDB1-210ENST00000538129 Q6ZVQ6 151 aa3.81□□□□□ -1.8
DDB1-210ENST00000538129 LINC00518Q8N0U6 118 aa3.81□□□□□ -1.8
DDB1-210ENST00000538129 GEMIN7Q9H840 131 aaKnown RBP3.81□□□□□ -1.8
DDB1-210ENST00000538129 PKIGQ9Y2B9 76 aa3.81□□□□□ -1.8
DDB1-210ENST00000538129 A0A0J9YXV3 536 aa3.8□□□□□ -1.8
DDB1-210ENST00000538129 SERF1AO75920 110 aa3.8□□□□□ -1.8
DDB1-210ENST00000538129 NDUFA6P56556 154 aa3.8□□□□□ -1.8
DDB1-210ENST00000538129 SYCNQ0VAF6 134 aa3.8□□□□□ -1.8
DDB1-210ENST00000538129 ORAOV1Q8WV07 137 aa3.8□□□□□ -1.8
DDB1-210ENST00000538129 CDKN2A-AS1Q9UH64 79 aa3.8□□□□□ -1.8
DDB1-210ENST00000538129 TRAV12-1A0A0B4J245 112 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 HIST1H2BKO60814 126 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 LEPROTL1O95214 131 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 HIST1H2BJP06899 126 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 IGLC3P0DOY3 106 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 HIST1H2BOP23527 126 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 HIST1H2BBP33778 126 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 HIST1H2BDP58876 126 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 HIST1H2BCP62807 126 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 SPAG11BQ08648 103 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 KIAA0087Q14695 138 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 HIST2H2BEQ16778 126 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.79□□□□□ -1.8
DDB1-210ENST00000538129 FAM19A2Q8N3H0 131 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 HIST1H2BHQ93079 126 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 IFI27L1Q96BM0 104 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 LINC00526Q96FQ7 95 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 CARD19Q96LW7 228 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 PACRGQ96M98 296 aaPredicted RBP3.79□□□□□ -1.8
DDB1-210ENST00000538129 CAMK2N2Q96S95 79 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 HIST1H2BNQ99877 126 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 HIST1H2BMQ99879 126 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 CHAC1Q9BUX1 264 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 MRPL35Q9NZE8 188 aaKnown RBP3.79□□□□□ -1.8
DDB1-210ENST00000538129 ABCA13Q86UQ4 5058 aa3.79□□□□□ -1.8
DDB1-210ENST00000538129 H3BRM9 83 aa3.78□□□□□ -1.8
DDB1-210ENST00000538129 NDUFA1O15239 70 aa3.78□□□□□ -1.8
DDB1-210ENST00000538129 NUPR1O60356 82 aa3.78□□□□□ -1.8
DDB1-210ENST00000538129 CIRBPQ14011 172 aaKnown RBP3.78□□□□□ -1.8
DDB1-210ENST00000538129 C6orf226Q5I0X4 101 aa3.78□□□□□ -1.8
DDB1-210ENST00000538129 Q6ZRU5 148 aa3.78□□□□□ -1.8
DDB1-210ENST00000538129 Q8IZM0 81 aa3.78□□□□□ -1.8
DDB1-210ENST00000538129 LINC00469Q8N7U9 141 aa3.78□□□□□ -1.8
DDB1-210ENST00000538129 DPH3Q96FX2 82 aa3.78□□□□□ -1.8
DDB1-210ENST00000538129 LINC00474Q9P2X8 69 aa3.78□□□□□ -1.8
DDB1-210ENST00000538129 HSPB8Q9UJY1 196 aa3.78□□□□□ -1.8
DDB1-210ENST00000538129 CHTOPQ9Y3Y2 248 aaKnown RBP3.78□□□□□ -1.8
DDB1-210ENST00000538129 TRBV30A0A0K0K1B3 111 aa3.77□□□□□ -1.81
DDB1-210ENST00000538129 LOC107984640A0A0U1RRK4 108 aa3.77□□□□□ -1.81
DDB1-210ENST00000538129 CKS1BP61024 79 aa3.77□□□□□ -1.81
DDB1-210ENST00000538129 COA6Q5JTJ3 125 aaKnown RBP3.77□□□□□ -1.81
DDB1-210ENST00000538129 UNQ6190/PRO20217Q6UXQ8 127 aa3.77□□□□□ -1.81
DDB1-210ENST00000538129 SCXQ7RTU7 201 aa3.77□□□□□ -1.81
DDB1-210ENST00000538129 CIRBP-AS1Q8TBR5 109 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms