RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PRSS2P07478 247 aa14.36□□□□□ -0.11
SFSWAP-204ENST00000535399 GAGE2BQ13066 116 aa14.36□□□□□ -0.11
SFSWAP-204ENST00000535399 PLA2G1BP04054 148 aaKnown RBP14.35□□□□□ -0.11
SFSWAP-204ENST00000535399 STPG4Q8N801 248 aa14.35□□□□□ -0.11
SFSWAP-204ENST00000535399 IFI27L1Q96BM0 104 aa14.35□□□□□ -0.11
SFSWAP-204ENST00000535399 KRTAP10-4P60372 401 aaPredicted RBP14.34□□□□□ -0.11
SFSWAP-204ENST00000535399 C6orf226Q5I0X4 101 aa14.34□□□□□ -0.11
SFSWAP-204ENST00000535399 TRBV30A0A0K0K1B3 111 aa14.33□□□□□ -0.12
SFSWAP-204ENST00000535399 NUPR1O60356 82 aa14.33□□□□□ -0.12
SFSWAP-204ENST00000535399 TLX1NBP0CAT3 122 aa14.33□□□□□ -0.12
SFSWAP-204ENST00000535399 RPL18AQ02543 176 aaKnown RBP14.33□□□□□ -0.12
SFSWAP-204ENST00000535399 SPINK8P0C7L1 97 aa14.32□□□□□ -0.12
SFSWAP-204ENST00000535399 ZNF22P17026 224 aaPredicted RBP14.32□□□□□ -0.12
SFSWAP-204ENST00000535399 INAFM2P0DMQ5 153 aa14.31□□□□□ -0.12
SFSWAP-204ENST00000535399 CKS1BP61024 79 aa14.31□□□□□ -0.12
SFSWAP-204ENST00000535399 TRAV12-1A0A0B4J245 112 aa14.3□□□□□ -0.12
SFSWAP-204ENST00000535399 C11orf86A6NJI1 115 aa14.3□□□□□ -0.12
SFSWAP-204ENST00000535399 H3BRM9 83 aa14.3□□□□□ -0.12
SFSWAP-204ENST00000535399 Q6ZRP5 223 aa14.3□□□□□ -0.12
SFSWAP-204ENST00000535399 C9orf116Q5BN46 136 aaPredicted RBP14.29□□□□□ -0.12
SFSWAP-204ENST00000535399 COX7B2Q8TF08 81 aa14.29□□□□□ -0.12
SFSWAP-204ENST00000535399 CHTOPQ9Y3Y2 248 aaKnown RBP14.29□□□□□ -0.12
SFSWAP-204ENST00000535399 A0A1W2PNN7 141 aa14.28□□□□□ -0.12
SFSWAP-204ENST00000535399 HIST1H2BKO60814 126 aa14.28□□□□□ -0.12
SFSWAP-204ENST00000535399 HIST1H2BJP06899 126 aa14.28□□□□□ -0.12
SFSWAP-204ENST00000535399 HIST1H2BOP23527 126 aa14.28□□□□□ -0.12
SFSWAP-204ENST00000535399 HIST1H2BBP33778 126 aa14.28□□□□□ -0.12
SFSWAP-204ENST00000535399 HIST1H2BDP58876 126 aa14.28□□□□□ -0.12
SFSWAP-204ENST00000535399 RPL37AP61513 92 aaKnown RBP14.28□□□□□ -0.12
SFSWAP-204ENST00000535399 HIST1H2BCP62807 126 aa14.28□□□□□ -0.12
SFSWAP-204ENST00000535399 HIST2H2BEQ16778 126 aa14.28□□□□□ -0.12
SFSWAP-204ENST00000535399 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.28□□□□□ -0.12
SFSWAP-204ENST00000535399 HIST1H2BHQ93079 126 aa14.28□□□□□ -0.12
SFSWAP-204ENST00000535399 HIST1H2BNQ99877 126 aa14.28□□□□□ -0.12
SFSWAP-204ENST00000535399 HIST1H2BMQ99879 126 aa14.28□□□□□ -0.12
SFSWAP-204ENST00000535399 IGLV5-39A0A0G2JS06 123 aa14.27□□□□□ -0.13
SFSWAP-204ENST00000535399 CXCL5P42830 114 aa14.27□□□□□ -0.13
SFSWAP-204ENST00000535399 F8VRH5 84 aa14.26□□□□□ -0.13
SFSWAP-204ENST00000535399 LEPROTL1O95214 131 aa14.26□□□□□ -0.13
SFSWAP-204ENST00000535399 NDUFC2-KCTD14E9PQ53 114 aa14.25□□□□□ -0.13
SFSWAP-204ENST00000535399 S100A1P23297 94 aa14.25□□□□□ -0.13
SFSWAP-204ENST00000535399 ATP6V1G1O75348 118 aa14.24□□□□□ -0.13
SFSWAP-204ENST00000535399 GAGE2EQ4V326 116 aa14.24□□□□□ -0.13
SFSWAP-204ENST00000535399 TMEM170BQ5T4T1 132 aa14.24□□□□□ -0.13
SFSWAP-204ENST00000535399 GAGE2DQ9UEU5 116 aa14.24□□□□□ -0.13
SFSWAP-204ENST00000535399 FLG2Q5D862 2391 aaPredicted RBP14.23□□□□□ -0.13
SFSWAP-204ENST00000535399 C7orf33Q8WU49 177 aa14.23□□□□□ -0.13
SFSWAP-204ENST00000535399 HSPB8Q9UJY1 196 aa14.22□□□□□ -0.13
SFSWAP-204ENST00000535399 FABP4P15090 132 aa14.21□□□□□ -0.13
SFSWAP-204ENST00000535399 MYCBP2O75592 4640 aa14.2□□□□□ -0.14
SFSWAP-204ENST00000535399 ODF1Q14990 250 aa14.2□□□□□ -0.14
SFSWAP-204ENST00000535399 H0Y8G0 127 aa14.19□□□□□ -0.14
SFSWAP-204ENST00000535399 TMEM223A0PJW6 202 aa14.18□□□□□ -0.14
SFSWAP-204ENST00000535399 FAM168BA1KXE4 195 aa14.18□□□□□ -0.14
SFSWAP-204ENST00000535399 C9orf129Q5T035 196 aaKnown RBP14.18□□□□□ -0.14
SFSWAP-204ENST00000535399 HNRNPA3P51991 378 aaKnown RBP14.16□□□□□ -0.14
SFSWAP-204ENST00000535399 KRTAP7-1Q8IUC3 87 aa14.16□□□□□ -0.14
SFSWAP-204ENST00000535399 PKHD1L1Q86WI1 4243 aa14.16□□□□□ -0.14
SFSWAP-204ENST00000535399 COA6Q5JTJ3 125 aaKnown RBP14.14□□□□□ -0.15
SFSWAP-204ENST00000535399 PHF5AQ7RTV0 110 aaKnown RBP14.14□□□□□ -0.15
SFSWAP-204ENST00000535399 FAM19A5Q7Z5A7 132 aaPredicted RBP14.14□□□□□ -0.15
SFSWAP-204ENST00000535399 PRR3P79522 188 aaKnown RBP14.13□□□□□ -0.15
SFSWAP-204ENST00000535399 XAGE1AQ9HD64 81 aa14.12□□□□□ -0.15
SFSWAP-204ENST00000535399 ZNF625Q96I27 306 aaPredicted RBP14.11□□□□□ -0.15
SFSWAP-204ENST00000535399 MAP1LC3CQ9BXW4 147 aa14.11□□□□□ -0.15
SFSWAP-204ENST00000535399 PLNP26678 52 aa14.1□□□□□ -0.15
SFSWAP-204ENST00000535399 PMCHL2Q9BQD1 86 aa14.1□□□□□ -0.15
SFSWAP-204ENST00000535399 DPM2O94777 84 aa14.08□□□□□ -0.16
SFSWAP-204ENST00000535399 SERTAD4-AS1Q5TG53 156 aa14.08□□□□□ -0.16
SFSWAP-204ENST00000535399 SFTA2Q6UW10 78 aa14.08□□□□□ -0.16
SFSWAP-204ENST00000535399 M0QXV9 152 aa14.07□□□□□ -0.16
SFSWAP-204ENST00000535399 ERG28Q9UKR5 140 aa14.07□□□□□ -0.16
SFSWAP-204ENST00000535399 SYS1-DBNDD2H3BUS1 97 aa14.05□□□□□ -0.16
SFSWAP-204ENST00000535399 IGKCP01834 107 aa14.05□□□□□ -0.16
SFSWAP-204ENST00000535399 PFN2P35080 140 aa14.05□□□□□ -0.16
SFSWAP-204ENST00000535399 KRTAP11-1Q8IUC1 163 aa14.05□□□□□ -0.16
SFSWAP-204ENST00000535399 PSORS1C2Q9UIG4 136 aa14.05□□□□□ -0.16
SFSWAP-204ENST00000535399 LRP1Q07954 4544 aaKnown RBP14.05□□□□□ -0.16
SFSWAP-204ENST00000535399 FAT3Q8TDW7 4589 aa14.03□□□□□ -0.16
SFSWAP-204ENST00000535399 COX17Q14061 63 aa14.03□□□□□ -0.16
SFSWAP-204ENST00000535399 C22orf24Q9Y442 160 aa14.02□□□□□ -0.17
SFSWAP-204ENST00000535399 LEPROTO15243 131 aa14.01□□□□□ -0.17
SFSWAP-204ENST00000535399 TSPEAR-AS2P59090 65 aa14.01□□□□□ -0.17
SFSWAP-204ENST00000535399 PLA2G2DQ9UNK4 145 aa14.01□□□□□ -0.17
SFSWAP-204ENST00000535399 KRTAP29-1A8MX34 341 aaPredicted RBP14□□□□□ -0.17
SFSWAP-204ENST00000535399 DMBT1Q9UGM3 2413 aaPredicted RBP14□□□□□ -0.17
SFSWAP-204ENST00000535399 C3orf79P0CE67 100 aa13.99□□□□□ -0.17
SFSWAP-204ENST00000535399 HERVK_113P61574 105 aa13.99□□□□□ -0.17
SFSWAP-204ENST00000535399 LINC01545Q5VT33 79 aa13.99□□□□□ -0.17
SFSWAP-204ENST00000535399 PET117Q6UWS5 81 aa13.99□□□□□ -0.17
SFSWAP-204ENST00000535399 PLEKHB2Q96CS7 222 aa13.99□□□□□ -0.17
SFSWAP-204ENST00000535399 SND1-IT1Q9HBX3 110 aa13.99□□□□□ -0.17
SFSWAP-204ENST00000535399 TP73-AS1Q9UF72 201 aa13.99□□□□□ -0.17
SFSWAP-204ENST00000535399 NDUFA12Q9UI09 145 aa13.99□□□□□ -0.17
SFSWAP-204ENST00000535399 SRSF9Q13242 221 aaKnown RBP eCLIP13.98□□□□□ -0.172e-6■□□□□ 9
SFSWAP-204ENST00000535399 HERV-K104P63124 156 aa13.97□□□□□ -0.17
SFSWAP-204ENST00000535399 UBE2BP63146 152 aa13.97□□□□□ -0.17
SFSWAP-204ENST00000535399 C1orf137Q5JT78 98 aa13.97□□□□□ -0.17
SFSWAP-204ENST00000535399 IGLV5-37A0A075B6J1 123 aa13.96□□□□□ -0.17
SFSWAP-204ENST00000535399 LBHQ53QV2 105 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms