RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 APLNQ9ULZ1 77 aa-0.87□□□□□ -2.55
CCDC7-207ENST00000535327 NALCNQ8IZF0 1738 aa-0.87□□□□□ -2.55
CCDC7-207ENST00000535327 C1orf167Q5SNV9 1468 aa-0.87□□□□□ -2.55
CCDC7-207ENST00000535327 NBPF19A0A087WUL8 3843 aa-0.87□□□□□ -2.55
CCDC7-207ENST00000535327 DNAH6Q9C0G6 4158 aa-0.87□□□□□ -2.55
CCDC7-207ENST00000535327 SCAPERQ9BY12 1400 aa-0.88□□□□□ -2.55
CCDC7-207ENST00000535327 A0A0G2JMZ2 1700 aa-0.88□□□□□ -2.55
CCDC7-207ENST00000535327 CPSF4LA6NMK7 179 aaKnown RBP-0.88□□□□□ -2.55
CCDC7-207ENST00000535327 SPRR2EP22531 72 aa-0.88□□□□□ -2.55
CCDC7-207ENST00000535327 MT4P47944 62 aa-0.88□□□□□ -2.55
CCDC7-207ENST00000535327 C12orf57Q99622 126 aa-0.88□□□□□ -2.55
CCDC7-207ENST00000535327 PRO1854Q9UHT4 67 aa-0.88□□□□□ -2.55
CCDC7-207ENST00000535327 NEBP20929 6669 aa-0.89□□□□□ -2.55
CCDC7-207ENST00000535327 UBE2D3P61077 147 aa-0.89□□□□□ -2.55
CCDC7-207ENST00000535327 UBE2D2P62837 147 aa-0.89□□□□□ -2.55
CCDC7-207ENST00000535327 LINC00846Q9NV44 126 aa-0.89□□□□□ -2.55
CCDC7-207ENST00000535327 IER3IP1Q9Y5U9 82 aa-0.89□□□□□ -2.55
CCDC7-207ENST00000535327 MYOM2P54296 1465 aa-0.89□□□□□ -2.55
CCDC7-207ENST00000535327 STARD9Q9P2P6 4700 aa-0.89□□□□□ -2.55
CCDC7-207ENST00000535327 PKD1P98161 4303 aa-0.9□□□□□ -2.55
CCDC7-207ENST00000535327 USH2AO75445 5202 aa-0.9□□□□□ -2.55
CCDC7-207ENST00000535327 ADGRL2O95490 1459 aa-0.9□□□□□ -2.55
CCDC7-207ENST00000535327 CCDC141Q6ZP82 1450 aa-0.9□□□□□ -2.55
CCDC7-207ENST00000535327 SEC11AP67812 179 aa-0.9□□□□□ -2.55
CCDC7-207ENST00000535327 DEFB135Q30KP9 77 aa-0.9□□□□□ -2.55
CCDC7-207ENST00000535327 SFTA2Q6UW10 78 aa-0.9□□□□□ -2.55
CCDC7-207ENST00000535327 LCN9Q8WX39 176 aa-0.9□□□□□ -2.55
CCDC7-207ENST00000535327 DIP2CQ9Y2E4 1556 aa-0.91□□□□□ -2.55
CCDC7-207ENST00000535327 XRN1Q8IZH2 1706 aaKnown RBP-0.91□□□□□ -2.55
CCDC7-207ENST00000535327 FMN2Q9NZ56 1722 aa-0.91□□□□□ -2.55
CCDC7-207ENST00000535327 FAM223BA6NKX1 122 aa-0.91□□□□□ -2.56
CCDC7-207ENST00000535327 SAA2P0DJI9 122 aaPredicted RBP-0.91□□□□□ -2.56
CCDC7-207ENST00000535327 ZFHX3Q15911 3703 aa-0.91□□□□□ -2.56
CCDC7-207ENST00000535327 HTTP42858 3142 aa-0.91□□□□□ -2.56
CCDC7-207ENST00000535327 PCNX1Q96RV3 2341 aa-0.92□□□□□ -2.56
CCDC7-207ENST00000535327 MRC2Q9UBG0 1479 aa-0.92□□□□□ -2.56
CCDC7-207ENST00000535327 NUP188Q5SRE5 1749 aa-0.92□□□□□ -2.56
CCDC7-207ENST00000535327 GNG4P50150 75 aa-0.92□□□□□ -2.56
CCDC7-207ENST00000535327 SCN7AQ01118 1682 aa-0.92□□□□□ -2.56
CCDC7-207ENST00000535327 HIVEP1P15822 2718 aa-0.93□□□□□ -2.56
CCDC7-207ENST00000535327 CRIPTQ9P021 101 aa-0.93□□□□□ -2.56
CCDC7-207ENST00000535327 PDCD11Q14690 1871 aaKnown RBP-0.94□□□□□ -2.56
CCDC7-207ENST00000535327 EFCAB10A6NFE3 127 aa-0.94□□□□□ -2.56
CCDC7-207ENST00000535327 PPP3R1P63098 170 aa-0.94□□□□□ -2.56
CCDC7-207ENST00000535327 TOP2BQ02880 1626 aa-0.94□□□□□ -2.56
CCDC7-207ENST00000535327 PLEKHH2Q8IVE3 1493 aa-0.94□□□□□ -2.56
CCDC7-207ENST00000535327 PAPPA2Q9BXP8 1791 aa-0.95□□□□□ -2.56
CCDC7-207ENST00000535327 CRYM-AS1A6NIL9 109 aa-0.95□□□□□ -2.56
CCDC7-207ENST00000535327 H3BQ15 152 aa-0.95□□□□□ -2.56
CCDC7-207ENST00000535327 KRTDAPP60985 99 aa-0.95□□□□□ -2.56
CCDC7-207ENST00000535327 UBR4Q5T4S7 5183 aa-0.95□□□□□ -2.56
CCDC7-207ENST00000535327 A0A1B0GU69 56 aa-0.96□□□□□ -2.56
CCDC7-207ENST00000535327 I3L3M4 83 aa-0.96□□□□□ -2.56
CCDC7-207ENST00000535327 DLEU1O43261 78 aa-0.96□□□□□ -2.56
CCDC7-207ENST00000535327 H1FX-AS1Q4G0G2 97 aa-0.96□□□□□ -2.56
CCDC7-207ENST00000535327 DOPEY1Q5JWR5 2465 aa-0.96□□□□□ -2.56
CCDC7-207ENST00000535327 EPG5Q9HCE0 2579 aa-0.97□□□□□ -2.56
CCDC7-207ENST00000535327 AKAP9Q99996 3911 aa-0.97□□□□□ -2.56
CCDC7-207ENST00000535327 NKTRP30414 1462 aaKnown RBP-0.97□□□□□ -2.56
CCDC7-207ENST00000535327 NLRP1Q9C000 1473 aa-0.97□□□□□ -2.56
CCDC7-207ENST00000535327 MAPKBP1O60336 1514 aa-0.97□□□□□ -2.56
CCDC7-207ENST00000535327 C9orf62Q8N4C0 152 aa-0.97□□□□□ -2.56
CCDC7-207ENST00000535327 VAMP8Q9BV40 100 aa-0.97□□□□□ -2.56
CCDC7-207ENST00000535327 NRKQ7Z2Y5 1582 aa-0.97□□□□□ -2.56
CCDC7-207ENST00000535327 EIF4G3O43432 1585 aaKnown RBP-0.98□□□□□ -2.57
CCDC7-207ENST00000535327 CORTO00230 105 aa-0.98□□□□□ -2.57
CCDC7-207ENST00000535327 CGREF1Q99674 301 aa-0.98□□□□□ -2.57
CCDC7-207ENST00000535327 HYDINQ4G0P3 5121 aa-0.98□□□□□ -2.57
CCDC7-207ENST00000535327 ARHGAP5Q13017 1502 aa-0.99□□□□□ -2.57
CCDC7-207ENST00000535327 FAT3Q8TDW7 4589 aa-0.99□□□□□ -2.57
CCDC7-207ENST00000535327 C6orf201Q7Z4U5 140 aa-0.99□□□□□ -2.57
CCDC7-207ENST00000535327 EDC4Q6P2E9 1401 aaKnown RBP-0.99□□□□□ -2.57
CCDC7-207ENST00000535327 USP9YO00507 2555 aaPredicted RBP-1□□□□□ -2.57
CCDC7-207ENST00000535327 DNAH3Q8TD57 4116 aa-1□□□□□ -2.57
CCDC7-207ENST00000535327 MARF1Q9Y4F3 1742 aaKnown RBP-1□□□□□ -2.57
CCDC7-207ENST00000535327 TACC2O95359 2948 aa-1□□□□□ -2.57
CCDC7-207ENST00000535327 A0A087WVE0 104 aa-1□□□□□ -2.57
CCDC7-207ENST00000535327 A0A1B0GV90 55 aa-1□□□□□ -2.57
CCDC7-207ENST00000535327 H3BQF6 201 aa-1□□□□□ -2.57
CCDC7-207ENST00000535327 S100A1P23297 94 aa-1□□□□□ -2.57
CCDC7-207ENST00000535327 SNCAP37840 140 aa-1□□□□□ -2.57
CCDC7-207ENST00000535327 PKHD1L1Q86WI1 4243 aa-1□□□□□ -2.57
CCDC7-207ENST00000535327 C7orf77A4D0Y5 90 aa-1.01□□□□□ -2.57
CCDC7-207ENST00000535327 TMEM262E9PQX1 116 aa-1.01□□□□□ -2.57
CCDC7-207ENST00000535327 MRPS10P82664 201 aaKnown RBP-1.01□□□□□ -2.57
CCDC7-207ENST00000535327 DEFB112Q30KQ8 113 aa-1.01□□□□□ -2.57
CCDC7-207ENST00000535327 EPPK1P58107 5090 aaKnown RBP-1.01□□□□□ -2.57
CCDC7-207ENST00000535327 A0A0G2JND7 137 aa-1.02□□□□□ -2.57
CCDC7-207ENST00000535327 ANKRD36A6QL64 1941 aa-1.02□□□□□ -2.57
CCDC7-207ENST00000535327 GNG8Q9UK08 70 aa-1.02□□□□□ -2.57
CCDC7-207ENST00000535327 LAMA1P25391 3075 aa-1.02□□□□□ -2.57
CCDC7-207ENST00000535327 RYR3Q15413 4870 aa-1.03□□□□□ -2.57
CCDC7-207ENST00000535327 H0Y9P7 68 aa-1.03□□□□□ -2.57
CCDC7-207ENST00000535327 CCL22O00626 93 aa-1.03□□□□□ -2.57
CCDC7-207ENST00000535327 TMEM203Q969S6 136 aa-1.03□□□□□ -2.57
CCDC7-207ENST00000535327 ITPR3Q14573 2671 aa-1.03□□□□□ -2.58
CCDC7-207ENST00000535327 LRRC37AA6NMS7 1700 aa-1.03□□□□□ -2.58
CCDC7-207ENST00000535327 LYSTQ99698 3801 aa-1.04□□□□□ -2.58
CCDC7-207ENST00000535327 HECTD1Q9ULT8 2610 aa-1.04□□□□□ -2.58
CCDC7-207ENST00000535327 GTF2H5Q6ZYL4 71 aa-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms