RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 Q6ZR54 194 aa3.38□□□□□ -1.87
SNHG1-201ENST00000535076 CDKN2A-AS1Q9UH64 79 aa3.38□□□□□ -1.87
SNHG1-201ENST00000535076 COL27A1Q8IZC6 1860 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-201ENST00000535076 IGHV4-28A0A0C4DH34 117 aa3.37□□□□□ -1.87
SNHG1-201ENST00000535076 IGHV4-61A0A0C4DH41 118 aa3.37□□□□□ -1.87
SNHG1-201ENST00000535076 IGHV3-66A0A0C4DH42 116 aa3.37□□□□□ -1.87
SNHG1-201ENST00000535076 SMIM1B2RUZ4 78 aa3.37□□□□□ -1.87
SNHG1-201ENST00000535076 RNASE3P12724 160 aaKnown RBP3.37□□□□□ -1.87
SNHG1-201ENST00000535076 SPINK7P58062 85 aa3.37□□□□□ -1.87
SNHG1-201ENST00000535076 DSCR9P59020 149 aa3.37□□□□□ -1.87
SNHG1-201ENST00000535076 MRGPRG-AS1Q2M3A8 158 aa3.37□□□□□ -1.87
SNHG1-201ENST00000535076 ODF3L2Q3SX64 289 aa3.37□□□□□ -1.87
SNHG1-201ENST00000535076 CASC10Q5T4H9 136 aa3.37□□□□□ -1.87
SNHG1-201ENST00000535076 REG3GQ6UW15 175 aa3.37□□□□□ -1.87
SNHG1-201ENST00000535076 ADM2Q7Z4H4 148 aa3.37□□□□□ -1.87
SNHG1-201ENST00000535076 COA5Q86WW8 74 aa3.37□□□□□ -1.87
SNHG1-201ENST00000535076 CSNK1G2-AS1Q8NCQ2 148 aa3.37□□□□□ -1.87
SNHG1-201ENST00000535076 CR1P17927 2039 aa3.36□□□□□ -1.87
SNHG1-201ENST00000535076 IGLV10-54A0A075B6I4 117 aa3.36□□□□□ -1.87
SNHG1-201ENST00000535076 TRGV4A0A0C4DH28 118 aa3.36□□□□□ -1.87
SNHG1-201ENST00000535076 K7EIM0 57 aa3.36□□□□□ -1.87
SNHG1-201ENST00000535076 K7ERS5 55 aa3.36□□□□□ -1.87
SNHG1-201ENST00000535076 IGHV1-8P0DP01 117 aa3.36□□□□□ -1.87
SNHG1-201ENST00000535076 IGHV4-30-4P0DP06 118 aa3.36□□□□□ -1.87
SNHG1-201ENST00000535076 COX7A1P24310 79 aa3.36□□□□□ -1.87
SNHG1-201ENST00000535076 CCL18P55774 89 aa3.36□□□□□ -1.87
SNHG1-201ENST00000535076 C1orf137Q5JT78 98 aa3.36□□□□□ -1.87
SNHG1-201ENST00000535076 C9orf163Q8N9P6 203 aa3.36□□□□□ -1.87
SNHG1-201ENST00000535076 CAMK2N2Q96S95 79 aa3.36□□□□□ -1.87
SNHG1-201ENST00000535076 SVILO95425 2214 aa3.36□□□□□ -1.87
SNHG1-201ENST00000535076 F5P12259 2224 aa3.36□□□□□ -1.87
SNHG1-201ENST00000535076 RTTNQ86VV8 2226 aa3.35□□□□□ -1.87
SNHG1-201ENST00000535076 PRAC2D3DTV9 90 aa3.35□□□□□ -1.87
SNHG1-201ENST00000535076 PLA2G2AP14555 144 aa3.35□□□□□ -1.87
SNHG1-201ENST00000535076 KLK9Q2XQG4 91 aa3.35□□□□□ -1.87
SNHG1-201ENST00000535076 HIGD2BQ4VC39 106 aa3.35□□□□□ -1.87
SNHG1-201ENST00000535076 SMIM29Q86T20 159 aa3.35□□□□□ -1.87
SNHG1-201ENST00000535076 LINC00612Q8N6U2 182 aa3.35□□□□□ -1.87
SNHG1-201ENST00000535076 LINC01006Q8NI28 216 aa3.35□□□□□ -1.87
SNHG1-201ENST00000535076 LEAP2Q969E1 77 aa3.35□□□□□ -1.87
SNHG1-201ENST00000535076 SPRR4Q96PI1 79 aa3.35□□□□□ -1.87
SNHG1-201ENST00000535076 Q9Y3F1 56 aa3.35□□□□□ -1.87
SNHG1-201ENST00000535076 PRRC2BQ5JSZ5 2229 aaKnown RBP3.35□□□□□ -1.87
SNHG1-201ENST00000535076 IGLV11-55A0A075B6I3 123 aa3.34□□□□□ -1.87
SNHG1-201ENST00000535076 A0A096LNT2 108 aa3.34□□□□□ -1.87
SNHG1-201ENST00000535076 KRTAP4-16G5E9R7 235 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-201ENST00000535076 LINC00158P58513 81 aa3.34□□□□□ -1.87
SNHG1-201ENST00000535076 KRTAP25-1Q3LHN0 102 aa3.34□□□□□ -1.87
SNHG1-201ENST00000535076 C10orf25Q5T742 122 aa3.34□□□□□ -1.87
SNHG1-201ENST00000535076 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.34□□□□□ -1.87
SNHG1-201ENST00000535076 KRTAP1-5Q9BYS1 174 aa3.34□□□□□ -1.87
SNHG1-201ENST00000535076 PRR34Q9NV39 138 aa3.34□□□□□ -1.87
SNHG1-201ENST00000535076 DPM3Q9P2X0 92 aa3.34□□□□□ -1.87
SNHG1-201ENST00000535076 IGHV3-64DA0A0J9YX35 117 aa3.33□□□□□ -1.88
SNHG1-201ENST00000535076 UQCR11O14957 56 aa3.33□□□□□ -1.88
SNHG1-201ENST00000535076 EGFEM1PQ0D2K5 195 aa3.33□□□□□ -1.88
SNHG1-201ENST00000535076 PRR4Q16378 134 aa3.33□□□□□ -1.88
SNHG1-201ENST00000535076 LYPD2Q6UXB3 125 aa3.33□□□□□ -1.88
SNHG1-201ENST00000535076 CHCHD7Q9BUK0 85 aa3.33□□□□□ -1.88
SNHG1-201ENST00000535076 LINC00959A0A1B0GUT2 108 aa3.32□□□□□ -1.88
SNHG1-201ENST00000535076 M0R2N4 97 aa3.32□□□□□ -1.88
SNHG1-201ENST00000535076 DEFB112Q30KQ8 113 aa3.32□□□□□ -1.88
SNHG1-201ENST00000535076 LINC00483Q53H64 154 aa3.32□□□□□ -1.88
SNHG1-201ENST00000535076 C10orf55Q5SWW7 151 aa3.32□□□□□ -1.88
SNHG1-201ENST00000535076 DMAC1Q96GE9 116 aa3.32□□□□□ -1.88
SNHG1-201ENST00000535076 C8orf17Q9NRJ1 99 aa3.32□□□□□ -1.88
SNHG1-201ENST00000535076 FAM215AQ9Y5M1 114 aa3.32□□□□□ -1.88
SNHG1-201ENST00000535076 RP1P56715 2156 aa3.32□□□□□ -1.88
SNHG1-201ENST00000535076 MRPL33O75394 65 aaKnown RBP3.31□□□□□ -1.88
SNHG1-201ENST00000535076 P0C880 135 aa3.31□□□□□ -1.88
SNHG1-201ENST00000535076 COX17Q14061 63 aa3.31□□□□□ -1.88
SNHG1-201ENST00000535076 CEP290O15078 2479 aa3.3□□□□□ -1.88
SNHG1-201ENST00000535076 IGLV1-50A0A075B6I6 118 aa3.3□□□□□ -1.88
SNHG1-201ENST00000535076 A8MWP4 228 aa3.3□□□□□ -1.88
SNHG1-201ENST00000535076 INAFM1C9JVW0 142 aa3.3□□□□□ -1.88
SNHG1-201ENST00000535076 CMC4P56277 68 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-201ENST00000535076 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
SNHG1-201ENST00000535076 KRTAP26-1Q6PEX3 210 aa3.3□□□□□ -1.88
SNHG1-201ENST00000535076 Q6ZQY7 126 aa3.3□□□□□ -1.88
SNHG1-201ENST00000535076 C20orf166-AS1Q96NR2 134 aa3.3□□□□□ -1.88
SNHG1-201ENST00000535076 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
SNHG1-201ENST00000535076 DEFB131BA0A096LNP1 70 aa3.29□□□□□ -1.88
SNHG1-201ENST00000535076 IGKV3-20P01619 116 aa3.29□□□□□ -1.88
SNHG1-201ENST00000535076 PRR9Q5T870 116 aa3.29□□□□□ -1.88
SNHG1-201ENST00000535076 SPINK14Q6IE38 97 aa3.29□□□□□ -1.88
SNHG1-201ENST00000535076 ST20-AS1Q8NBB2 130 aa3.29□□□□□ -1.88
SNHG1-201ENST00000535076 CYSRT1A8MQ03 144 aa3.28□□□□□ -1.88
SNHG1-201ENST00000535076 ZNF861PO60384 105 aa3.28□□□□□ -1.88
SNHG1-201ENST00000535076 CD52P31358 61 aa3.28□□□□□ -1.88
SNHG1-201ENST00000535076 COX6A2Q02221 97 aa3.28□□□□□ -1.88
SNHG1-201ENST00000535076 CNTRLQ7Z7A1 2325 aa3.27□□□□□ -1.89
SNHG1-201ENST00000535076 IGKV2D-24A0A075B6R9 120 aa3.27□□□□□ -1.89
SNHG1-201ENST00000535076 DNAH10OSP0CZ25 163 aa3.27□□□□□ -1.89
SNHG1-201ENST00000535076 DEFB110Q30KQ9 67 aa3.27□□□□□ -1.89
SNHG1-201ENST00000535076 PTPRQQ9UMZ3 2332 aa3.27□□□□□ -1.89
SNHG1-201ENST00000535076 ZNF318Q5VUA4 2279 aa3.27□□□□□ -1.89
SNHG1-201ENST00000535076 SEC16AO15027 2179 aa3.27□□□□□ -1.89
SNHG1-201ENST00000535076 NAV3Q8IVL0 2385 aa3.26□□□□□ -1.89
SNHG1-201ENST00000535076 IGLV5-48A0A075B6I7 105 aa3.26□□□□□ -1.89
SNHG1-201ENST00000535076 NUPR2A6NF83 97 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms