RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 LINC00528Q8N1L1 170 aa8.91□□□□□ -0.98
VPS11-205ENST00000534551 LINC01561Q8N1V8 128 aa8.91□□□□□ -0.98
VPS11-205ENST00000534551 S100A1P23297 94 aa8.9□□□□□ -0.98
VPS11-205ENST00000534551 RPL18AQ02543 176 aaKnown RBP8.9□□□□□ -0.98
VPS11-205ENST00000534551 MAJINQ3KP22 176 aa8.9□□□□□ -0.98
VPS11-205ENST00000534551 A0A087WYN8 130 aa8.89□□□□□ -0.99
VPS11-205ENST00000534551 H0Y8G0 127 aa8.89□□□□□ -0.99
VPS11-205ENST00000534551 GAGE2BQ13066 116 aa8.89□□□□□ -0.99
VPS11-205ENST00000534551 C9orf116Q5BN46 136 aaPredicted RBP8.89□□□□□ -0.99
VPS11-205ENST00000534551 MRPL35Q9NZE8 188 aaKnown RBP8.89□□□□□ -0.99
VPS11-205ENST00000534551 PKHD1L1Q86WI1 4243 aa8.89□□□□□ -0.99
VPS11-205ENST00000534551 EPM2AB3EWF7 344 aa8.88□□□□□ -0.99
VPS11-205ENST00000534551 FABP4P15090 132 aa8.88□□□□□ -0.99
VPS11-205ENST00000534551 CHTOPQ9Y3Y2 248 aaKnown RBP8.88□□□□□ -0.99
VPS11-205ENST00000534551 LOC107984640A0A0U1RRK4 108 aa8.87□□□□□ -0.99
VPS11-205ENST00000534551 LEPROTL1O95214 131 aa8.87□□□□□ -0.99
VPS11-205ENST00000534551 PRSS2P07478 247 aa8.87□□□□□ -0.99
VPS11-205ENST00000534551 PTTG1IPP53801 180 aa8.87□□□□□ -0.99
VPS11-205ENST00000534551 Q8IZM0 81 aa8.87□□□□□ -0.99
VPS11-205ENST00000534551 STPG4Q8N801 248 aa8.86□□□□□ -0.99
VPS11-205ENST00000534551 TMEM170BQ5T4T1 132 aa8.85□□□□□ -0.99
VPS11-205ENST00000534551 COX7B2Q8TF08 81 aa8.85□□□□□ -0.99
VPS11-205ENST00000534551 DPH3Q96FX2 82 aa8.85□□□□□ -0.99
VPS11-205ENST00000534551 TRAV12-1A0A0B4J245 112 aa8.84□□□□□ -0.99
VPS11-205ENST00000534551 F8VRH5 84 aa8.84□□□□□ -0.99
VPS11-205ENST00000534551 H3BRM9 83 aa8.84□□□□□ -0.99
VPS11-205ENST00000534551 CKS1BP61024 79 aa8.84□□□□□ -0.99
VPS11-205ENST00000534551 ODF1Q14990 250 aa8.84□□□□□ -0.99
VPS11-205ENST00000534551 RNF151Q2KHN1 245 aa8.84□□□□□ -0.99
VPS11-205ENST00000534551 C6orf226Q5I0X4 101 aa8.84□□□□□ -0.99
VPS11-205ENST00000534551 Q6ZRP5 223 aa8.84□□□□□ -0.99
VPS11-205ENST00000534551 PMCHL2Q9BQD1 86 aa8.84□□□□□ -0.99
VPS11-205ENST00000534551 PLAC8Q9NZF1 115 aa8.84□□□□□ -0.99
VPS11-205ENST00000534551 IGLV5-39A0A0G2JS06 123 aa8.83□□□□□ -1
VPS11-205ENST00000534551 A0A1W2PNN7 141 aa8.83□□□□□ -1
VPS11-205ENST00000534551 FAM168BA1KXE4 195 aa8.83□□□□□ -1
VPS11-205ENST00000534551 F8WDY8 70 aa8.83□□□□□ -1
VPS11-205ENST00000534551 KRTAP10-4P60372 401 aaPredicted RBP8.83□□□□□ -1
VPS11-205ENST00000534551 GAGE2EQ4V326 116 aa8.83□□□□□ -1
VPS11-205ENST00000534551 GAGE2DQ9UEU5 116 aa8.83□□□□□ -1
VPS11-205ENST00000534551 TRBV30A0A0K0K1B3 111 aa8.82□□□□□ -1
VPS11-205ENST00000534551 FAM229AH3BQW9 127 aa8.82□□□□□ -1
VPS11-205ENST00000534551 HSPB8Q9UJY1 196 aa8.82□□□□□ -1
VPS11-205ENST00000534551 SRRM2Q9UQ35 2752 aaKnown RBP8.81□□□□□ -1
VPS11-205ENST00000534551 TLX1NBP0CAT3 122 aa8.81□□□□□ -1
VPS11-205ENST00000534551 PKIGQ9Y2B9 76 aa8.81□□□□□ -1
VPS11-205ENST00000534551 TMEM223A0PJW6 202 aa8.8□□□□□ -1
VPS11-205ENST00000534551 NDUFC2-KCTD14E9PQ53 114 aa8.79□□□□□ -1
VPS11-205ENST00000534551 CXCL5P42830 114 aa8.79□□□□□ -1
VPS11-205ENST00000534551 RPL37AP61513 92 aaKnown RBP8.79□□□□□ -1
VPS11-205ENST00000534551 COA6Q5JTJ3 125 aaKnown RBP8.79□□□□□ -1
VPS11-205ENST00000534551 C9orf129Q5T035 196 aaKnown RBP8.79□□□□□ -1
VPS11-205ENST00000534551 KRTAP7-1Q8IUC3 87 aa8.79□□□□□ -1
VPS11-205ENST00000534551 LINC00474Q9P2X8 69 aa8.79□□□□□ -1
VPS11-205ENST00000534551 HNRNPA3P51991 378 aaKnown RBP8.78□□□□□ -1
VPS11-205ENST00000534551 FAM19A5Q7Z5A7 132 aaPredicted RBP8.78□□□□□ -1
VPS11-205ENST00000534551 XAGE1AQ9HD64 81 aa8.78□□□□□ -1
VPS11-205ENST00000534551 MYCBP2O75592 4640 aa8.78□□□□□ -1
VPS11-205ENST00000534551 FLG2Q5D862 2391 aaPredicted RBP8.78□□□□□ -1
VPS11-205ENST00000534551 PLA2G1BP04054 148 aaKnown RBP8.77□□□□□ -1.01
VPS11-205ENST00000534551 TSPEAR-AS2P59090 65 aa8.77□□□□□ -1.01
VPS11-205ENST00000534551 PHF5AQ7RTV0 110 aaKnown RBP8.77□□□□□ -1.01
VPS11-205ENST00000534551 ZNF625Q96I27 306 aaPredicted RBP8.77□□□□□ -1.01
VPS11-205ENST00000534551 MAP1LC3CQ9BXW4 147 aa8.77□□□□□ -1.01
VPS11-205ENST00000534551 SYS1-DBNDD2H3BUS1 97 aa8.75□□□□□ -1.01
VPS11-205ENST00000534551 DPM2O94777 84 aa8.75□□□□□ -1.01
VPS11-205ENST00000534551 INAFM2P0DMQ5 153 aa8.75□□□□□ -1.01
VPS11-205ENST00000534551 SERTAD4-AS1Q5TG53 156 aa8.75□□□□□ -1.01
VPS11-205ENST00000534551 IGKCP01834 107 aa8.74□□□□□ -1.01
VPS11-205ENST00000534551 C3orf79P0CE67 100 aa8.74□□□□□ -1.01
VPS11-205ENST00000534551 PFN2P35080 140 aa8.74□□□□□ -1.01
VPS11-205ENST00000534551 FAT3Q8TDW7 4589 aa8.74□□□□□ -1.01
VPS11-205ENST00000534551 PLNP26678 52 aa8.73□□□□□ -1.01
VPS11-205ENST00000534551 KRTAP11-1Q8IUC1 163 aa8.73□□□□□ -1.01
VPS11-205ENST00000534551 C7orf33Q8WU49 177 aa8.73□□□□□ -1.01
VPS11-205ENST00000534551 LRP1Q07954 4544 aaKnown RBP8.72□□□□□ -1.01
VPS11-205ENST00000534551 M0QXV9 152 aa8.72□□□□□ -1.01
VPS11-205ENST00000534551 KRTDAPP60985 99 aa8.72□□□□□ -1.01
VPS11-205ENST00000534551 PRR3P79522 188 aaKnown RBP8.72□□□□□ -1.01
VPS11-205ENST00000534551 ERG28Q9UKR5 140 aa8.72□□□□□ -1.01
VPS11-205ENST00000534551 LINC01545Q5VT33 79 aa8.71□□□□□ -1.02
VPS11-205ENST00000534551 A0A0U1RRA0 63 aa8.7□□□□□ -1.02
VPS11-205ENST00000534551 HIST3H2BBQ8N257 126 aa8.7□□□□□ -1.02
VPS11-205ENST00000534551 NDUFA12Q9UI09 145 aa8.69□□□□□ -1.02
VPS11-205ENST00000534551 LEPROTO15243 131 aa8.68□□□□□ -1.02
VPS11-205ENST00000534551 HERVK_113P61574 105 aa8.68□□□□□ -1.02
VPS11-205ENST00000534551 PET117Q6UWS5 81 aa8.68□□□□□ -1.02
VPS11-205ENST00000534551 Q8NDZ9 215 aa8.68□□□□□ -1.02
VPS11-205ENST00000534551 SND1-IT1Q9HBX3 110 aa8.68□□□□□ -1.02
VPS11-205ENST00000534551 PSORS1C2Q9UIG4 136 aa8.67□□□□□ -1.02
VPS11-205ENST00000534551 J3QQQ9 107 aa8.66□□□□□ -1.02
VPS11-205ENST00000534551 SMIM13P0DJ93 91 aa8.66□□□□□ -1.02
VPS11-205ENST00000534551 ATOH7Q8N100 152 aa8.66□□□□□ -1.02
VPS11-205ENST00000534551 PLEKHB2Q96CS7 222 aa8.66□□□□□ -1.02
VPS11-205ENST00000534551 HIST1H2BLQ99880 126 aa8.66□□□□□ -1.02
VPS11-205ENST00000534551 C22orf24Q9Y442 160 aa8.66□□□□□ -1.02
VPS11-205ENST00000534551 LINC00158P58513 81 aa8.65□□□□□ -1.02
VPS11-205ENST00000534551 MEIG1Q5JSS6 88 aa8.65□□□□□ -1.02
VPS11-205ENST00000534551 SFTA2Q6UW10 78 aa8.65□□□□□ -1.02
VPS11-205ENST00000534551 IGKV2D-26A0A0A0MRZ7 120 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms