RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 PRB2P02812 416 aaPredicted RBP2.18□□□□□ -2.06
C11orf54-213ENST00000533585 PLGLAQ15195 96 aa2.18□□□□□ -2.06
C11orf54-213ENST00000533585 UNQ6190/PRO20217Q6UXQ8 127 aa2.18□□□□□ -2.06
C11orf54-213ENST00000533585 CCL19Q99731 98 aa2.18□□□□□ -2.06
C11orf54-213ENST00000533585 TNRC6BQ9UPQ9 1833 aaKnown RBP2.17□□□□□ -2.06
C11orf54-213ENST00000533585 TET1Q8NFU7 2136 aa2.17□□□□□ -2.06
C11orf54-213ENST00000533585 D6R8Y8 96 aa2.17□□□□□ -2.06
C11orf54-213ENST00000533585 MGPP08493 103 aa2.17□□□□□ -2.06
C11orf54-213ENST00000533585 MUSTN1Q8IVN3 82 aa2.17□□□□□ -2.06
C11orf54-213ENST00000533585 SSC5DA1L4H1 1573 aa2.17□□□□□ -2.06
C11orf54-213ENST00000533585 LOC285556D6RIA3 1793 aa2.17□□□□□ -2.06
C11orf54-213ENST00000533585 QSER1Q2KHR3 1735 aa2.17□□□□□ -2.06
C11orf54-213ENST00000533585 DDX60LQ5H9U9 1706 aaKnown RBP2.17□□□□□ -2.06
C11orf54-213ENST00000533585 NHSQ6T4R5 1651 aa2.16□□□□□ -2.06
C11orf54-213ENST00000533585 TRGV1A0A0A0MS02 117 aa2.16□□□□□ -2.06
C11orf54-213ENST00000533585 TRAV1-2A0A0B4J238 106 aa2.16□□□□□ -2.06
C11orf54-213ENST00000533585 CEBPZOSA8MTT3 80 aa2.16□□□□□ -2.06
C11orf54-213ENST00000533585 SPINT3P49223 89 aa2.16□□□□□ -2.06
C11orf54-213ENST00000533585 DEFB103AP81534 67 aa2.16□□□□□ -2.06
C11orf54-213ENST00000533585 KRTAP13-4Q3LI77 160 aa2.16□□□□□ -2.06
C11orf54-213ENST00000533585 PDCD11Q14690 1871 aaKnown RBP2.16□□□□□ -2.06
C11orf54-213ENST00000533585 BTAF1O14981 1849 aa2.15□□□□□ -2.06
C11orf54-213ENST00000533585 LRRC37AA6NMS7 1700 aa2.15□□□□□ -2.07
C11orf54-213ENST00000533585 DOT1LQ8TEK3 1739 aa2.15□□□□□ -2.07
C11orf54-213ENST00000533585 ACYP2P14621 99 aa2.15□□□□□ -2.07
C11orf54-213ENST00000533585 COX17Q14061 63 aa2.15□□□□□ -2.07
C11orf54-213ENST00000533585 SMIM4Q8WVI0 70 aa2.15□□□□□ -2.07
C11orf54-213ENST00000533585 Q96NJ1 140 aa2.15□□□□□ -2.07
C11orf54-213ENST00000533585 PRRC2BQ5JSZ5 2229 aaKnown RBP2.15□□□□□ -2.07
C11orf54-213ENST00000533585 NOTCH3Q9UM47 2321 aa2.14□□□□□ -2.07
C11orf54-213ENST00000533585 NRAPQ86VF7 1730 aa2.14□□□□□ -2.07
C11orf54-213ENST00000533585 A0A087WVE0 104 aa2.14□□□□□ -2.07
C11orf54-213ENST00000533585 UMAD1C9J7I0 102 aa2.14□□□□□ -2.07
C11orf54-213ENST00000533585 FDCSPQ8NFU4 85 aa2.14□□□□□ -2.07
C11orf54-213ENST00000533585 COL5A1P20908 1838 aaPredicted RBP2.14□□□□□ -2.07
C11orf54-213ENST00000533585 LY75O60449 1722 aa2.14□□□□□ -2.07
C11orf54-213ENST00000533585 GBF1Q92538 1859 aa2.14□□□□□ -2.07
C11orf54-213ENST00000533585 A0A087WXM4 84 aa2.13□□□□□ -2.07
C11orf54-213ENST00000533585 ZNF137PP52743 207 aa2.13□□□□□ -2.07
C11orf54-213ENST00000533585 KRTAP10-1P60331 282 aa2.13□□□□□ -2.07
C11orf54-213ENST00000533585 INTS1Q8N201 2190 aaKnown RBP2.12□□□□□ -2.07
C11orf54-213ENST00000533585 TRBV30A0A0K0K1B3 111 aa2.12□□□□□ -2.07
C11orf54-213ENST00000533585 KRTAP10-3P60369 221 aa2.12□□□□□ -2.07
C11orf54-213ENST00000533585 DEFB121Q5J5C9 76 aa2.12□□□□□ -2.07
C11orf54-213ENST00000533585 C6orf201Q7Z4U5 140 aa2.11□□□□□ -2.07
C11orf54-213ENST00000533585 LINC00846Q9NV44 126 aa2.11□□□□□ -2.07
C11orf54-213ENST00000533585 UBR3Q6ZT12 1888 aa2.1□□□□□ -2.07
C11orf54-213ENST00000533585 NCR3O14931 201 aa2.1□□□□□ -2.07
C11orf54-213ENST00000533585 KRTAP12-2P59991 146 aa2.1□□□□□ -2.07
C11orf54-213ENST00000533585 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
C11orf54-213ENST00000533585 Q6JHZ5 121 aa2.1□□□□□ -2.07
C11orf54-213ENST00000533585 C10orf99Q6UWK7 81 aa2.1□□□□□ -2.07
C11orf54-213ENST00000533585 Q9Y3F1 56 aa2.1□□□□□ -2.07
C11orf54-213ENST00000533585 DEFB107AQ8IZN7 70 aa2.09□□□□□ -2.07
C11orf54-213ENST00000533585 SPRR4Q96PI1 79 aa2.09□□□□□ -2.07
C11orf54-213ENST00000533585 PROK2Q9HC23 129 aa2.09□□□□□ -2.07
C11orf54-213ENST00000533585 UBE2D4Q9Y2X8 147 aa2.09□□□□□ -2.07
C11orf54-213ENST00000533585 CACNA1GO43497 2377 aa2.09□□□□□ -2.08
C11orf54-213ENST00000533585 MYO7BQ6PIF6 2116 aa2.08□□□□□ -2.08
C11orf54-213ENST00000533585 A0A087WWC5 75 aa2.08□□□□□ -2.08
C11orf54-213ENST00000533585 KRTAP13-3Q3SY46 172 aa2.08□□□□□ -2.08
C11orf54-213ENST00000533585 PCOTHQ58A44 107 aa2.08□□□□□ -2.08
C11orf54-213ENST00000533585 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.08□□□□□ -2.08
C11orf54-213ENST00000533585 LINC00575Q6W349 94 aa2.08□□□□□ -2.08
C11orf54-213ENST00000533585 ATP5EP2Q5VTU8 51 aa2.07□□□□□ -2.08
C11orf54-213ENST00000533585 NCBP2-AS2Q69YL0 99 aa2.07□□□□□ -2.08
C11orf54-213ENST00000533585 ZNF236Q9UL36 1845 aa2.07□□□□□ -2.08
C11orf54-213ENST00000533585 H0Y9P7 68 aa2.06□□□□□ -2.08
C11orf54-213ENST00000533585 HMGA1P17096 107 aaKnown RBP2.06□□□□□ -2.08
C11orf54-213ENST00000533585 GCHFRP30047 84 aa2.06□□□□□ -2.08
C11orf54-213ENST00000533585 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
C11orf54-213ENST00000533585 SMIM11BQ8TCY0 68 aa2.06□□□□□ -2.08
C11orf54-213ENST00000533585 TMEM263Q8WUH6 116 aaKnown RBP2.06□□□□□ -2.08
C11orf54-213ENST00000533585 ZCCHC13Q8WW36 166 aaKnown RBP2.06□□□□□ -2.08
C11orf54-213ENST00000533585 SDK1Q7Z5N4 2213 aa2.05□□□□□ -2.08
C11orf54-213ENST00000533585 DEFB106AQ8N104 65 aa2.05□□□□□ -2.08
C11orf54-213ENST00000533585 LINC00472Q9H8W2 130 aa2.05□□□□□ -2.08
C11orf54-213ENST00000533585 A0A0G2JMZ2 1700 aa2.04□□□□□ -2.08
C11orf54-213ENST00000533585 A0A1B0GUT8 65 aa2.04□□□□□ -2.08
C11orf54-213ENST00000533585 IFI27P40305 119 aaPredicted RBP2.04□□□□□ -2.08
C11orf54-213ENST00000533585 SPINK13Q1W4C9 94 aa2.04□□□□□ -2.08
C11orf54-213ENST00000533585 PLAC8Q9NZF1 115 aa2.04□□□□□ -2.08
C11orf54-213ENST00000533585 COL4A1P02462 1669 aa2.03□□□□□ -2.08
C11orf54-213ENST00000533585 COL4A4P53420 1690 aaPredicted RBP2.03□□□□□ -2.08
C11orf54-213ENST00000533585 A0A096LNT2 108 aa2.03□□□□□ -2.08
C11orf54-213ENST00000533585 IFI6P09912 130 aa2.03□□□□□ -2.08
C11orf54-213ENST00000533585 Q6ZRX8 168 aa2.03□□□□□ -2.08
C11orf54-213ENST00000533585 PLAC4Q8WY50 150 aa2.03□□□□□ -2.08
C11orf54-213ENST00000533585 MED13LQ71F56 2210 aa2.02□□□□□ -2.09
C11orf54-213ENST00000533585 GVQW2A0A096LPI5 108 aaPredicted RBP2.02□□□□□ -2.09
C11orf54-213ENST00000533585 H3BVH4 76 aa2.02□□□□□ -2.09
C11orf54-213ENST00000533585 LY6G6CO95867 125 aa2.02□□□□□ -2.09
C11orf54-213ENST00000533585 COX8AP10176 69 aa2.02□□□□□ -2.09
C11orf54-213ENST00000533585 S100A3P33764 101 aa2.02□□□□□ -2.09
C11orf54-213ENST00000533585 SNRPGP62308 76 aaKnown RBP2.02□□□□□ -2.09
C11orf54-213ENST00000533585 C10orf113Q5VZT2 155 aa2.02□□□□□ -2.09
C11orf54-213ENST00000533585 SPATA8Q6RVD6 105 aa2.02□□□□□ -2.09
C11orf54-213ENST00000533585 LRRC37A2A6NM11 1700 aa2.02□□□□□ -2.09
C11orf54-213ENST00000533585 TSC2P49815 1807 aa2.01□□□□□ -2.09
C11orf54-213ENST00000533585 TRBV7-4A0A0J9YYF1 115 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms