RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 RAB5BP61020 215 aa7.55□□□□□ -1.2
COPB1-209ENST00000533096 LINC01561Q8N1V8 128 aa7.55□□□□□ -1.2
COPB1-209ENST00000533096 PRELID3AQ96N28 172 aa7.55□□□□□ -1.2
COPB1-209ENST00000533096 PPBPP02775 128 aa7.54□□□□□ -1.2
COPB1-209ENST00000533096 S100A8P05109 93 aa7.54□□□□□ -1.2
COPB1-209ENST00000533096 ORMDL3Q8N138 153 aa7.54□□□□□ -1.2
COPB1-209ENST00000533096 PPDPFQ9H3Y8 114 aa7.54□□□□□ -1.2
COPB1-209ENST00000533096 F8VRH5 84 aa7.53□□□□□ -1.2
COPB1-209ENST00000533096 TPRXLQ17RH7 258 aa7.53□□□□□ -1.2
COPB1-209ENST00000533096 Q8IZM0 81 aa7.53□□□□□ -1.2
COPB1-209ENST00000533096 TP73-AS1Q9UF72 201 aa7.53□□□□□ -1.2
COPB1-209ENST00000533096 C2orf66Q6UXQ4 117 aa7.52□□□□□ -1.21
COPB1-209ENST00000533096 CDKN2A-AS1Q9UH64 79 aa7.52□□□□□ -1.21
COPB1-209ENST00000533096 NAT8Q9UHE5 227 aa7.52□□□□□ -1.21
COPB1-209ENST00000533096 CYSLTR1Q9Y271 337 aa7.52□□□□□ -1.21
COPB1-209ENST00000533096 C9JQL5 133 aa7.51□□□□□ -1.21
COPB1-209ENST00000533096 SCO1O75880 301 aa7.51□□□□□ -1.21
COPB1-209ENST00000533096 GEMIN7Q9H840 131 aaKnown RBP7.51□□□□□ -1.21
COPB1-209ENST00000533096 IGKV2-28A0A075B6P5 120 aa7.5□□□□□ -1.21
COPB1-209ENST00000533096 IGKV2D-28P01615 120 aa7.5□□□□□ -1.21
COPB1-209ENST00000533096 LINC01547P58512 204 aaPredicted RBP7.5□□□□□ -1.21
COPB1-209ENST00000533096 LINC00337Q8N6G1 96 aa7.5□□□□□ -1.21
COPB1-209ENST00000533096 NKAPP1Q8N9T2 125 aa7.5□□□□□ -1.21
COPB1-209ENST00000533096 AMELXQ99217 191 aa7.5□□□□□ -1.21
COPB1-209ENST00000533096 A0A1B0GXF2 115 aa7.49□□□□□ -1.21
COPB1-209ENST00000533096 PRLHP81277 87 aa7.49□□□□□ -1.21
COPB1-209ENST00000533096 PNRC1Q12796 327 aaPredicted RBP7.49□□□□□ -1.21
COPB1-209ENST00000533096 FAM229BQ4G0N7 80 aa7.49□□□□□ -1.21
COPB1-209ENST00000533096 MAP1LC3AQ9H492 121 aa7.49□□□□□ -1.21
COPB1-209ENST00000533096 HERVK_113P63121 156 aa7.48□□□□□ -1.21
COPB1-209ENST00000533096 FAM19A1Q7Z5A9 133 aa7.48□□□□□ -1.21
COPB1-209ENST00000533096 IGIPA6NJ69 53 aa7.47□□□□□ -1.21
COPB1-209ENST00000533096 SRSF3P84103 164 aaKnown RBP7.47□□□□□ -1.21
COPB1-209ENST00000533096 KRTAP13-1Q8IUC0 172 aa7.47□□□□□ -1.21
COPB1-209ENST00000533096 Q8N8P6 123 aa7.47□□□□□ -1.21
COPB1-209ENST00000533096 SEC11AP67812 179 aa7.46□□□□□ -1.22
COPB1-209ENST00000533096 C3orf22Q8N5N4 141 aa7.46□□□□□ -1.22
COPB1-209ENST00000533096 PRSS47A8MTI9 375 aa7.45□□□□□ -1.22
COPB1-209ENST00000533096 PEA15Q15121 130 aa7.45□□□□□ -1.22
COPB1-209ENST00000533096 ORMDL2Q53FV1 153 aa7.45□□□□□ -1.22
COPB1-209ENST00000533096 AKAP14Q86UN6 197 aa7.45□□□□□ -1.22
COPB1-209ENST00000533096 COX7B2Q8TF08 81 aa7.45□□□□□ -1.22
COPB1-209ENST00000533096 CRCT1Q9UGL9 99 aa7.45□□□□□ -1.22
COPB1-209ENST00000533096 hCG_2014768A0A024R1R8 64 aa7.44□□□□□ -1.22
COPB1-209ENST00000533096 TMEM238C9JI98 176 aa7.44□□□□□ -1.22
COPB1-209ENST00000533096 CXCL5P42830 114 aa7.44□□□□□ -1.22
COPB1-209ENST00000533096 C4orf48Q5BLP8 95 aa7.44□□□□□ -1.22
COPB1-209ENST00000533096 FAM19A3Q7Z5A8 133 aa7.44□□□□□ -1.22
COPB1-209ENST00000533096 PFN2P35080 140 aa7.43□□□□□ -1.22
COPB1-209ENST00000533096 PAPPA-AS1Q5QFB9 102 aa7.43□□□□□ -1.22
COPB1-209ENST00000533096 IGLV5-37A0A075B6J1 123 aa7.42□□□□□ -1.22
COPB1-209ENST00000533096 SMIM1B2RUZ4 78 aa7.42□□□□□ -1.22
COPB1-209ENST00000533096 SPINK8P0C7L1 97 aa7.42□□□□□ -1.22
COPB1-209ENST00000533096 ATP5L2Q7Z4Y8 100 aa7.42□□□□□ -1.22
COPB1-209ENST00000533096 CBLN2Q8IUK8 224 aa7.42□□□□□ -1.22
COPB1-209ENST00000533096 PLEKHB2Q96CS7 222 aa7.42□□□□□ -1.22
COPB1-209ENST00000533096 LAMTOR2Q9Y2Q5 125 aa7.42□□□□□ -1.22
COPB1-209ENST00000533096 LCE2BO14633 110 aa7.41□□□□□ -1.22
COPB1-209ENST00000533096 PDZD11Q5EBL8 140 aa7.41□□□□□ -1.22
COPB1-209ENST00000533096 DAND5Q8N907 189 aa7.41□□□□□ -1.22
COPB1-209ENST00000533096 SCGB3A1Q96QR1 104 aa7.41□□□□□ -1.22
COPB1-209ENST00000533096 HIGD2AQ9BW72 106 aa7.41□□□□□ -1.22
COPB1-209ENST00000533096 TMEM126AQ9H061 195 aa7.41□□□□□ -1.22
COPB1-209ENST00000533096 MUC17Q685J3 4493 aa7.4□□□□□ -1.22
COPB1-209ENST00000533096 NPSP0C0P6 89 aa7.4□□□□□ -1.22
COPB1-209ENST00000533096 RAB14P61106 215 aa7.4□□□□□ -1.22
COPB1-209ENST00000533096 SPAG11AQ6PDA7 123 aa7.4□□□□□ -1.22
COPB1-209ENST00000533096 KRTAP4-1Q9BYQ7 146 aa7.4□□□□□ -1.22
COPB1-209ENST00000533096 ADCYAP1P18509 176 aa7.39□□□□□ -1.23
COPB1-209ENST00000533096 G0S2P27469 103 aa7.39□□□□□ -1.23
COPB1-209ENST00000533096 TINCRA0A1B0GVN0 87 aa7.38□□□□□ -1.23
COPB1-209ENST00000533096 M0R378 163 aa7.38□□□□□ -1.23
COPB1-209ENST00000533096 ATP5LO75964 103 aa7.38□□□□□ -1.23
COPB1-209ENST00000533096 CTAG1AP78358 180 aa7.38□□□□□ -1.23
COPB1-209ENST00000533096 KRTAP13-3Q3SY46 172 aa7.38□□□□□ -1.23
COPB1-209ENST00000533096 ASB16-AS1Q495Z4 193 aa7.38□□□□□ -1.23
COPB1-209ENST00000533096 TOMM6Q96B49 74 aa7.38□□□□□ -1.23
COPB1-209ENST00000533096 NXT2Q9NPJ8 142 aaKnown RBP7.38□□□□□ -1.23
COPB1-209ENST00000533096 FP248Q71RG6 208 aaPredicted RBP7.37□□□□□ -1.23
COPB1-209ENST00000533096 ERASQ7Z444 233 aa7.37□□□□□ -1.23
COPB1-209ENST00000533096 TIMM17AQ99595 171 aa7.37□□□□□ -1.23
COPB1-209ENST00000533096 K7EMI3 77 aa7.36□□□□□ -1.23
COPB1-209ENST00000533096 SEC61BP60468 96 aaKnown RBP7.36□□□□□ -1.23
COPB1-209ENST00000533096 RPL24P83731 157 aaKnown RBP7.36□□□□□ -1.23
COPB1-209ENST00000533096 KIAA1644Q3SXP7 199 aa7.36□□□□□ -1.23
COPB1-209ENST00000533096 Q8NBF4 154 aa7.36□□□□□ -1.23
COPB1-209ENST00000533096 ZNF625Q96I27 306 aaPredicted RBP7.36□□□□□ -1.23
COPB1-209ENST00000533096 CST9LQ9H4G1 147 aa7.36□□□□□ -1.23
COPB1-209ENST00000533096 SND1-IT1Q9HBX3 110 aa7.36□□□□□ -1.23
COPB1-209ENST00000533096 VPREB1P12018 145 aa7.35□□□□□ -1.23
COPB1-209ENST00000533096 GNB1LQ9BYB4 327 aa7.35□□□□□ -1.23
COPB1-209ENST00000533096 SPRR4Q96PI1 79 aa7.34□□□□□ -1.23
COPB1-209ENST00000533096 H3BRM9 83 aa7.33□□□□□ -1.24
COPB1-209ENST00000533096 NDUFA6P56556 154 aa7.33□□□□□ -1.24
COPB1-209ENST00000533096 IGLV5-45A0A087WSX0 123 aa7.32□□□□□ -1.24
COPB1-209ENST00000533096 MT-ND4LP03901 98 aa7.32□□□□□ -1.24
COPB1-209ENST00000533096 PMVKQ15126 192 aa7.32□□□□□ -1.24
COPB1-209ENST00000533096 Q8NDZ9 215 aa7.32□□□□□ -1.24
COPB1-209ENST00000533096 MRPL18Q9H0U6 180 aaKnown RBP7.32□□□□□ -1.24
COPB1-209ENST00000533096 ERG28Q9UKR5 140 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms