RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 ZNF561-AS1K7EIQ3 104 aa9.69□□□□□ -0.86
NXF1-214ENST00000533048 HERV-K104P63124 156 aa9.69□□□□□ -0.86
NXF1-214ENST00000533048 SLC25A34Q6PIV7 304 aa9.69□□□□□ -0.86
NXF1-214ENST00000533048 DNAH2Q9P225 4427 aa9.69□□□□□ -0.86
NXF1-214ENST00000533048 LECT2O14960 151 aa9.68□□□□□ -0.86
NXF1-214ENST00000533048 RTL8CO15255 209 aa9.68□□□□□ -0.86
NXF1-214ENST00000533048 CKS1BP61024 79 aa9.68□□□□□ -0.86
NXF1-214ENST00000533048 A0A087WTM6 91 aa9.67□□□□□ -0.86
NXF1-214ENST00000533048 C2orf82Q6UX34 121 aa9.67□□□□□ -0.86
NXF1-214ENST00000533048 LINC00526Q96FQ7 95 aa9.67□□□□□ -0.86
NXF1-214ENST00000533048 UQCR10Q9UDW1 63 aa9.67□□□□□ -0.86
NXF1-214ENST00000533048 KMT2CQ8NEZ4 4911 aaKnown RBP9.67□□□□□ -0.86
NXF1-214ENST00000533048 A0A0J9YXY3 114 aa9.66□□□□□ -0.86
NXF1-214ENST00000533048 CNBPP62633 177 aaKnown RBP9.66□□□□□ -0.86
NXF1-214ENST00000533048 TP73-AS1Q9UF72 201 aa9.66□□□□□ -0.86
NXF1-214ENST00000533048 DNAH17Q9UFH2 4485 aa9.65□□□□□ -0.86
NXF1-214ENST00000533048 TRBV30A0A0K0K1B3 111 aa9.65□□□□□ -0.86
NXF1-214ENST00000533048 TSTD3H0UI37 97 aa9.65□□□□□ -0.86
NXF1-214ENST00000533048 SLPIP03973 132 aa9.65□□□□□ -0.86
NXF1-214ENST00000533048 C10orf25Q5T742 122 aa9.65□□□□□ -0.86
NXF1-214ENST00000533048 CAMK2N2Q96S95 79 aa9.65□□□□□ -0.86
NXF1-214ENST00000533048 MIEN1Q9BRT3 115 aa9.65□□□□□ -0.86
NXF1-214ENST00000533048 PRO1933Q9H354 126 aa9.65□□□□□ -0.86
NXF1-214ENST00000533048 RYR2Q92736 4967 aa9.65□□□□□ -0.87
NXF1-214ENST00000533048 TIMM17BO60830 172 aa9.64□□□□□ -0.87
NXF1-214ENST00000533048 SYCNQ0VAF6 134 aa9.64□□□□□ -0.87
NXF1-214ENST00000533048 RNF151Q2KHN1 245 aa9.64□□□□□ -0.87
NXF1-214ENST00000533048 UNQ6190/PRO20217Q6UXQ8 127 aa9.64□□□□□ -0.87
NXF1-214ENST00000533048 Q6ZRU5 148 aa9.64□□□□□ -0.87
NXF1-214ENST00000533048 Q8N814 137 aa9.64□□□□□ -0.87
NXF1-214ENST00000533048 HIGD1BQ9P298 99 aa9.64□□□□□ -0.87
NXF1-214ENST00000533048 LINC00587B1AMM8 73 aa9.63□□□□□ -0.87
NXF1-214ENST00000533048 C2orf91Q6ZV80 131 aa9.63□□□□□ -0.87
NXF1-214ENST00000533048 LITAFQ99732 161 aa9.63□□□□□ -0.87
NXF1-214ENST00000533048 C6orf48Q9UBA6 75 aa9.63□□□□□ -0.87
NXF1-214ENST00000533048 FRAS1Q86XX4 4008 aa9.63□□□□□ -0.87
NXF1-214ENST00000533048 TNP2Q05952 138 aa9.62□□□□□ -0.87
NXF1-214ENST00000533048 COX17Q14061 63 aa9.62□□□□□ -0.87
NXF1-214ENST00000533048 SCGB1D4Q6XE38 83 aa9.62□□□□□ -0.87
NXF1-214ENST00000533048 CARD19Q96LW7 228 aa9.62□□□□□ -0.87
NXF1-214ENST00000533048 ERG28Q9UKR5 140 aa9.61□□□□□ -0.87
NXF1-214ENST00000533048 SPANXB1Q9NS25 103 aaPredicted RBP9.6□□□□□ -0.87
NXF1-214ENST00000533048 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.59□□□□□ -0.87
NXF1-214ENST00000533048 TMEM238C9JI98 176 aa9.59□□□□□ -0.87
NXF1-214ENST00000533048 CIRBPQ14011 172 aaKnown RBP9.59□□□□□ -0.87
NXF1-214ENST00000533048 MEIG1Q5JSS6 88 aa9.59□□□□□ -0.87
NXF1-214ENST00000533048 LINC00336Q6ZUF6 198 aa9.59□□□□□ -0.87
NXF1-214ENST00000533048 EREGO14944 169 aa9.58□□□□□ -0.88
NXF1-214ENST00000533048 TLX1NBP0CAT3 122 aa9.58□□□□□ -0.88
NXF1-214ENST00000533048 SMIM13P0DJ93 91 aa9.58□□□□□ -0.88
NXF1-214ENST00000533048 C9orf116Q5BN46 136 aaPredicted RBP9.58□□□□□ -0.88
NXF1-214ENST00000533048 SPANXDQ9BXN6 97 aa9.58□□□□□ -0.88
NXF1-214ENST00000533048 SPANXCQ9NY87 97 aa9.58□□□□□ -0.88
NXF1-214ENST00000533048 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.57□□□□□ -0.88
NXF1-214ENST00000533048 HNRNPA3P51991 378 aaKnown RBP9.57□□□□□ -0.88
NXF1-214ENST00000533048 ADAMTSL4-AS1Q5T5F5 129 aa9.57□□□□□ -0.88
NXF1-214ENST00000533048 Q6ZVH6 145 aa9.57□□□□□ -0.88
NXF1-214ENST00000533048 FAT2Q9NYQ8 4349 aa9.57□□□□□ -0.88
NXF1-214ENST00000533048 NDUFC2-KCTD14E9PQ53 114 aa9.56□□□□□ -0.88
NXF1-214ENST00000533048 DDTP30046 118 aa9.56□□□□□ -0.88
NXF1-214ENST00000533048 PTTG1IPP53801 180 aa9.56□□□□□ -0.88
NXF1-214ENST00000533048 C9orf163Q8N9P6 203 aa9.56□□□□□ -0.88
NXF1-214ENST00000533048 PPDPFQ9H3Y8 114 aa9.56□□□□□ -0.88
NXF1-214ENST00000533048 PFN2P35080 140 aa9.55□□□□□ -0.88
NXF1-214ENST00000533048 LINC00158P58513 81 aa9.55□□□□□ -0.88
NXF1-214ENST00000533048 TAL2Q16559 108 aa9.55□□□□□ -0.88
NXF1-214ENST00000533048 MIR7-3HGQ8N6C7 128 aa9.54□□□□□ -0.88
NXF1-214ENST00000533048 PKIGQ9Y2B9 76 aa9.54□□□□□ -0.88
NXF1-214ENST00000533048 LOC107984156A0A0G2JMH3 177 aa9.53□□□□□ -0.88
NXF1-214ENST00000533048 IFITM1P13164 125 aa9.53□□□□□ -0.88
NXF1-214ENST00000533048 HSD52Q0P140 79 aa9.53□□□□□ -0.88
NXF1-214ENST00000533048 ARL17AQ8IVW1 177 aa9.53□□□□□ -0.88
NXF1-214ENST00000533048 A0A0U1RRA0 63 aa9.52□□□□□ -0.89
NXF1-214ENST00000533048 LOC107984640A0A0U1RRK4 108 aa9.52□□□□□ -0.89
NXF1-214ENST00000533048 Q6ZRP5 223 aa9.52□□□□□ -0.89
NXF1-214ENST00000533048 DAND5Q8N907 189 aa9.52□□□□□ -0.89
NXF1-214ENST00000533048 SND1-IT1Q9HBX3 110 aa9.52□□□□□ -0.89
NXF1-214ENST00000533048 GCSHP23434 173 aa9.51□□□□□ -0.89
NXF1-214ENST00000533048 SRSF9Q13242 221 aaKnown RBP eCLIP9.51□□□□□ -0.89
NXF1-214ENST00000533048 LINC00308Q8TCZ7 52 aa9.51□□□□□ -0.89
NXF1-214ENST00000533048 HIST1H4GQ99525 98 aa9.51□□□□□ -0.89
NXF1-214ENST00000533048 IGLV5-52A0A0A0MRZ9 124 aa9.5□□□□□ -0.89
NXF1-214ENST00000533048 KRTAP10-2P60368 255 aa9.5□□□□□ -0.89
NXF1-214ENST00000533048 SOSTDC1Q6X4U4 206 aa9.5□□□□□ -0.89
NXF1-214ENST00000533048 SDIM1Q6ZPB5 146 aa9.5□□□□□ -0.89
NXF1-214ENST00000533048 COPS9Q8WXC6 57 aa9.5□□□□□ -0.89
NXF1-214ENST00000533048 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
NXF1-214ENST00000533048 DNAH11Q96DT5 4516 aa9.5□□□□□ -0.89
NXF1-214ENST00000533048 C16orf90A8MZG2 172 aa9.49□□□□□ -0.89
NXF1-214ENST00000533048 EIF4EBP3O60516 100 aaPredicted RBP9.49□□□□□ -0.89
NXF1-214ENST00000533048 CTAG1AP78358 180 aa9.49□□□□□ -0.89
NXF1-214ENST00000533048 A0A1B0GVY2 172 aa9.48□□□□□ -0.89
NXF1-214ENST00000533048 RPL18AQ02543 176 aaKnown RBP9.48□□□□□ -0.89
NXF1-214ENST00000533048 CEND1Q8N111 149 aa9.48□□□□□ -0.89
NXF1-214ENST00000533048 RYR3Q15413 4870 aa9.47□□□□□ -0.89
NXF1-214ENST00000533048 MUSTN1Q8IVN3 82 aa9.47□□□□□ -0.89
NXF1-214ENST00000533048 HECTD4Q9Y4D8 3996 aa9.46□□□□□ -0.89
NXF1-214ENST00000533048 A0A096LNI7 61 aa9.46□□□□□ -0.9
NXF1-214ENST00000533048 RPL24P83731 157 aaKnown RBP9.46□□□□□ -0.9
NXF1-214ENST00000533048 GAGE2EQ4V326 116 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms