RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 Q6ZRU5 148 aa11.86□□□□□ -0.51
SSH3-209ENST00000532600 CDKN2A-AS1Q9UH64 79 aa11.86□□□□□ -0.51
SSH3-209ENST00000532600 HERVK_113P63121 156 aa11.85□□□□□ -0.51
SSH3-209ENST00000532600 IGLV5-45A0A087WSX0 123 aa11.84□□□□□ -0.51
SSH3-209ENST00000532600 IGLC3P0DOY3 106 aa11.84□□□□□ -0.51
SSH3-209ENST00000532600 SYCNQ0VAF6 134 aa11.84□□□□□ -0.51
SSH3-209ENST00000532600 SERTAD4-AS1Q5TG53 156 aa11.84□□□□□ -0.51
SSH3-209ENST00000532600 ORAOV1Q8WV07 137 aa11.84□□□□□ -0.51
SSH3-209ENST00000532600 GEMIN7Q9H840 131 aaKnown RBP11.84□□□□□ -0.51
SSH3-209ENST00000532600 ZNF561-AS1K7EIQ3 104 aa11.83□□□□□ -0.52
SSH3-209ENST00000532600 LEPROTL1O95214 131 aa11.83□□□□□ -0.52
SSH3-209ENST00000532600 FABP4P15090 132 aa11.83□□□□□ -0.52
SSH3-209ENST00000532600 PRR3P79522 188 aaKnown RBP11.83□□□□□ -0.52
SSH3-209ENST00000532600 SPAG11BQ08648 103 aa11.83□□□□□ -0.52
SSH3-209ENST00000532600 LINC01561Q8N1V8 128 aa11.83□□□□□ -0.52
SSH3-209ENST00000532600 APOMO95445 188 aa11.82□□□□□ -0.52
SSH3-209ENST00000532600 SEC11AP67812 179 aa11.82□□□□□ -0.52
SSH3-209ENST00000532600 KIAA0087Q14695 138 aa11.82□□□□□ -0.52
SSH3-209ENST00000532600 LINC00469Q8N7U9 141 aa11.82□□□□□ -0.52
SSH3-209ENST00000532600 OR10D4PQ8NGN7 298 aa11.82□□□□□ -0.52
SSH3-209ENST00000532600 C7orf33Q8WU49 177 aa11.82□□□□□ -0.52
SSH3-209ENST00000532600 TRAV12-1A0A0B4J245 112 aa11.81□□□□□ -0.52
SSH3-209ENST00000532600 C11orf86A6NJI1 115 aa11.8□□□□□ -0.52
SSH3-209ENST00000532600 CHTOPQ9Y3Y2 248 aaKnown RBP11.8□□□□□ -0.52
SSH3-209ENST00000532600 TNXBP22105 4242 aa11.8□□□□□ -0.52
SSH3-209ENST00000532600 SMIM1B2RUZ4 78 aa11.79□□□□□ -0.52
SSH3-209ENST00000532600 ZNF22P17026 224 aaPredicted RBP11.79□□□□□ -0.52
SSH3-209ENST00000532600 PTTG1IPP53801 180 aa11.79□□□□□ -0.52
SSH3-209ENST00000532600 MRPL35Q9NZE8 188 aaKnown RBP11.79□□□□□ -0.52
SSH3-209ENST00000532600 LINC00474Q9P2X8 69 aa11.79□□□□□ -0.52
SSH3-209ENST00000532600 HSPB8Q9UJY1 196 aa11.79□□□□□ -0.52
SSH3-209ENST00000532600 UBR4Q5T4S7 5183 aa11.79□□□□□ -0.52
SSH3-209ENST00000532600 ODF1Q14990 250 aa11.78□□□□□ -0.52
SSH3-209ENST00000532600 C10orf25Q5T742 122 aa11.78□□□□□ -0.52
SSH3-209ENST00000532600 C2orf48Q96LS8 159 aa11.78□□□□□ -0.52
SSH3-209ENST00000532600 H0Y8G0 127 aa11.77□□□□□ -0.53
SSH3-209ENST00000532600 SPINK8P0C7L1 97 aa11.77□□□□□ -0.53
SSH3-209ENST00000532600 LOC107984640A0A0U1RRK4 108 aa11.76□□□□□ -0.53
SSH3-209ENST00000532600 A0A1W2PNN7 141 aa11.76□□□□□ -0.53
SSH3-209ENST00000532600 GAGE2BQ13066 116 aa11.76□□□□□ -0.53
SSH3-209ENST00000532600 CAMK2N2Q96S95 79 aa11.76□□□□□ -0.53
SSH3-209ENST00000532600 F8VRH5 84 aa11.75□□□□□ -0.53
SSH3-209ENST00000532600 C2orf82Q6UX34 121 aa11.75□□□□□ -0.53
SSH3-209ENST00000532600 UNQ6190/PRO20217Q6UXQ8 127 aa11.75□□□□□ -0.53
SSH3-209ENST00000532600 PACRGQ96M98 296 aaPredicted RBP11.75□□□□□ -0.53
SSH3-209ENST00000532600 PLA2G2DQ9UNK4 145 aa11.75□□□□□ -0.53
SSH3-209ENST00000532600 PKIGQ9Y2B9 76 aa11.75□□□□□ -0.53
SSH3-209ENST00000532600 TOMM7Q9P0U1 55 aa11.74□□□□□ -0.53
SSH3-209ENST00000532600 IGLV5-39A0A0G2JS06 123 aa11.73□□□□□ -0.53
SSH3-209ENST00000532600 Q8IZM0 81 aa11.73□□□□□ -0.53
SSH3-209ENST00000532600 PMCHL2Q9BQD1 86 aa11.73□□□□□ -0.53
SSH3-209ENST00000532600 C6orf48Q9UBA6 75 aa11.73□□□□□ -0.53
SSH3-209ENST00000532600 H3BRM9 83 aa11.72□□□□□ -0.53
SSH3-209ENST00000532600 NDUFA1O15239 70 aa11.71□□□□□ -0.53
SSH3-209ENST00000532600 SRSF9Q13242 221 aaKnown RBP eCLIP11.71□□□□□ -0.53
SSH3-209ENST00000532600 TMEM170BQ5T4T1 132 aa11.71□□□□□ -0.53
SSH3-209ENST00000532600 LINC01600Q96MT4 127 aa11.71□□□□□ -0.53
SSH3-209ENST00000532600 MAP1LC3CQ9BXW4 147 aa11.71□□□□□ -0.53
SSH3-209ENST00000532600 F8WDY8 70 aa11.7□□□□□ -0.54
SSH3-209ENST00000532600 SYS1-DBNDD2H3BUS1 97 aa11.7□□□□□ -0.54
SSH3-209ENST00000532600 RNF151Q2KHN1 245 aa11.7□□□□□ -0.54
SSH3-209ENST00000532600 HIST3H2BBQ8N257 126 aa11.7□□□□□ -0.54
SSH3-209ENST00000532600 COX7B2Q8TF08 81 aa11.7□□□□□ -0.54
SSH3-209ENST00000532600 TMEM223A0PJW6 202 aa11.69□□□□□ -0.54
SSH3-209ENST00000532600 PRSS2P07478 247 aa11.69□□□□□ -0.54
SSH3-209ENST00000532600 C9orf116Q5BN46 136 aaPredicted RBP11.69□□□□□ -0.54
SSH3-209ENST00000532600 C6orf226Q5I0X4 101 aa11.69□□□□□ -0.54
SSH3-209ENST00000532600 C3orf79P0CE67 100 aa11.68□□□□□ -0.54
SSH3-209ENST00000532600 RPL18AQ02543 176 aaKnown RBP11.68□□□□□ -0.54
SSH3-209ENST00000532600 Q6ZRP5 223 aa11.68□□□□□ -0.54
SSH3-209ENST00000532600 SPINK6Q6UWN8 80 aa11.67□□□□□ -0.54
SSH3-209ENST00000532600 DPM2O94777 84 aa11.66□□□□□ -0.54
SSH3-209ENST00000532600 CKS1BP61024 79 aa11.66□□□□□ -0.54
SSH3-209ENST00000532600 LINC01545Q5VT33 79 aa11.65□□□□□ -0.54
SSH3-209ENST00000532600 PHF5AQ7RTV0 110 aaKnown RBP11.65□□□□□ -0.54
SSH3-209ENST00000532600 HIST1H2BLQ99880 126 aa11.65□□□□□ -0.54
SSH3-209ENST00000532600 TRBV30A0A0K0K1B3 111 aa11.64□□□□□ -0.55
SSH3-209ENST00000532600 FAM168BA1KXE4 195 aa11.64□□□□□ -0.55
SSH3-209ENST00000532600 IGKCP01834 107 aa11.64□□□□□ -0.55
SSH3-209ENST00000532600 PLNP26678 52 aa11.64□□□□□ -0.55
SSH3-209ENST00000532600 KRTAP10-8P60410 259 aa11.64□□□□□ -0.55
SSH3-209ENST00000532600 KRTDAPP60985 99 aa11.64□□□□□ -0.55
SSH3-209ENST00000532600 SNRPEP62304 92 aaKnown RBP11.64□□□□□ -0.55
SSH3-209ENST00000532600 PET117Q6UWS5 81 aa11.64□□□□□ -0.55
SSH3-209ENST00000532600 PSORS1C2Q9UIG4 136 aa11.64□□□□□ -0.55
SSH3-209ENST00000532600 TLX1NBP0CAT3 122 aa11.63□□□□□ -0.55
SSH3-209ENST00000532600 KRTAP11-1Q8IUC1 163 aa11.63□□□□□ -0.55
SSH3-209ENST00000532600 KRTAP7-1Q8IUC3 87 aa11.63□□□□□ -0.55
SSH3-209ENST00000532600 S100A6P06703 90 aa11.62□□□□□ -0.55
SSH3-209ENST00000532600 CXCL5P42830 114 aa11.62□□□□□ -0.55
SSH3-209ENST00000532600 C5orf52A6NGY3 159 aa11.61□□□□□ -0.55
SSH3-209ENST00000532600 TSPEAR-AS2P59090 65 aa11.61□□□□□ -0.55
SSH3-209ENST00000532600 ZNF625Q96I27 306 aaPredicted RBP11.6□□□□□ -0.55
SSH3-209ENST00000532600 NDUFC2-KCTD14E9PQ53 114 aa11.58□□□□□ -0.56
SSH3-209ENST00000532600 S100A2P29034 98 aa11.58□□□□□ -0.56
SSH3-209ENST00000532600 REG3GQ6UW15 175 aa11.58□□□□□ -0.56
SSH3-209ENST00000532600 LRP2P98164 4655 aa11.57□□□□□ -0.56
SSH3-209ENST00000532600 GAGE2EQ4V326 116 aa11.57□□□□□ -0.56
SSH3-209ENST00000532600 GAGE2DQ9UEU5 116 aa11.57□□□□□ -0.56
SSH3-209ENST00000532600 C1orf137Q5JT78 98 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms