RNA–Protein interactions for RNA: ENST00000531319.1

AP004608.1-201, humanhuman

TSL 2 BASIC

Gene AP004608.1, Length 1,402 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-201ENST00000531319 ABCA13Q86UQ4 5058 aa13.56□□□□□ -0.24
AP004608.1-201ENST00000531319 RNF151Q2KHN1 245 aa13.56□□□□□ -0.24
AP004608.1-201ENST00000531319 COA6Q5JTJ3 125 aaKnown RBP13.56□□□□□ -0.24
AP004608.1-201ENST00000531319 TOMM7Q9P0U1 55 aa13.56□□□□□ -0.24
AP004608.1-201ENST00000531319 SRRM2Q9UQ35 2752 aaKnown RBP13.55□□□□□ -0.24
AP004608.1-201ENST00000531319 FABP4P15090 132 aa13.55□□□□□ -0.24
AP004608.1-201ENST00000531319 PACRGQ96M98 296 aaPredicted RBP13.55□□□□□ -0.24
AP004608.1-201ENST00000531319 IGKV2-24A0A0C4DH68 120 aa13.54□□□□□ -0.24
AP004608.1-201ENST00000531319 IGLV5-39A0A0G2JS06 123 aa13.53□□□□□ -0.24
AP004608.1-201ENST00000531319 ODF1Q14990 250 aa13.53□□□□□ -0.24
AP004608.1-201ENST00000531319 LOC107984640A0A0U1RRK4 108 aa13.52□□□□□ -0.25
AP004608.1-201ENST00000531319 A0A087WYN8 130 aa13.51□□□□□ -0.25
AP004608.1-201ENST00000531319 F8VRH5 84 aa13.51□□□□□ -0.25
AP004608.1-201ENST00000531319 PTTG1IPP53801 180 aa13.51□□□□□ -0.25
AP004608.1-201ENST00000531319 C9orf116Q5BN46 136 aaPredicted RBP13.51□□□□□ -0.25
AP004608.1-201ENST00000531319 C6orf226Q5I0X4 101 aa13.51□□□□□ -0.25
AP004608.1-201ENST00000531319 VPS13BQ7Z7G8 4022 aa13.51□□□□□ -0.25
AP004608.1-201ENST00000531319 H3BRM9 83 aa13.5□□□□□ -0.25
AP004608.1-201ENST00000531319 PRSS2P07478 247 aa13.5□□□□□ -0.25
AP004608.1-201ENST00000531319 COX7B2Q8TF08 81 aa13.5□□□□□ -0.25
AP004608.1-201ENST00000531319 HSPB8Q9UJY1 196 aa13.5□□□□□ -0.25
AP004608.1-201ENST00000531319 TRBV30A0A0K0K1B3 111 aa13.49□□□□□ -0.25
AP004608.1-201ENST00000531319 H0Y8G0 127 aa13.49□□□□□ -0.25
AP004608.1-201ENST00000531319 MAJINQ3KP22 176 aa13.49□□□□□ -0.25
AP004608.1-201ENST00000531319 PLAC8Q9NZF1 115 aa13.49□□□□□ -0.25
AP004608.1-201ENST00000531319 TLX1NBP0CAT3 122 aa13.48□□□□□ -0.25
AP004608.1-201ENST00000531319 CKS1BP61024 79 aa13.47□□□□□ -0.25
AP004608.1-201ENST00000531319 RPL18AQ02543 176 aaKnown RBP13.47□□□□□ -0.25
AP004608.1-201ENST00000531319 GAGE2BQ13066 116 aa13.47□□□□□ -0.25
AP004608.1-201ENST00000531319 TMEM170BQ5T4T1 132 aa13.47□□□□□ -0.25
AP004608.1-201ENST00000531319 Q5VSD8 79 aa13.47□□□□□ -0.25
AP004608.1-201ENST00000531319 Q6ZRP5 223 aa13.47□□□□□ -0.25
AP004608.1-201ENST00000531319 LINC00528Q8N1L1 170 aa13.47□□□□□ -0.25
AP004608.1-201ENST00000531319 PCLOQ9Y6V0 5065 aa13.47□□□□□ -0.25
AP004608.1-201ENST00000531319 TMEM223A0PJW6 202 aa13.46□□□□□ -0.26
AP004608.1-201ENST00000531319 PKIGQ9Y2B9 76 aa13.46□□□□□ -0.26
AP004608.1-201ENST00000531319 STPG4Q8N801 248 aa13.45□□□□□ -0.26
AP004608.1-201ENST00000531319 PMCHL2Q9BQD1 86 aa13.45□□□□□ -0.26
AP004608.1-201ENST00000531319 EPM2AB3EWF7 344 aa13.44□□□□□ -0.26
AP004608.1-201ENST00000531319 DPH3Q96FX2 82 aa13.44□□□□□ -0.26
AP004608.1-201ENST00000531319 LINC00474Q9P2X8 69 aa13.44□□□□□ -0.26
AP004608.1-201ENST00000531319 CXCL5P42830 114 aa13.43□□□□□ -0.26
AP004608.1-201ENST00000531319 KRTAP10-4P60372 401 aaPredicted RBP13.43□□□□□ -0.26
AP004608.1-201ENST00000531319 A0A1W2PNN7 141 aa13.42□□□□□ -0.26
AP004608.1-201ENST00000531319 NDUFC2-KCTD14E9PQ53 114 aa13.42□□□□□ -0.26
AP004608.1-201ENST00000531319 MAP1LC3CQ9BXW4 147 aa13.42□□□□□ -0.26
AP004608.1-201ENST00000531319 SYS1-DBNDD2H3BUS1 97 aa13.41□□□□□ -0.26
AP004608.1-201ENST00000531319 GAGE2EQ4V326 116 aa13.39□□□□□ -0.27
AP004608.1-201ENST00000531319 KRTAP7-1Q8IUC3 87 aa13.39□□□□□ -0.27
AP004608.1-201ENST00000531319 GAGE2DQ9UEU5 116 aa13.39□□□□□ -0.27
AP004608.1-201ENST00000531319 FAM229AH3BQW9 127 aa13.39□□□□□ -0.27
AP004608.1-201ENST00000531319 DPM2O94777 84 aa13.39□□□□□ -0.27
AP004608.1-201ENST00000531319 PLNP26678 52 aa13.39□□□□□ -0.27
AP004608.1-201ENST00000531319 C9orf129Q5T035 196 aaKnown RBP13.39□□□□□ -0.27
AP004608.1-201ENST00000531319 ZNF625Q96I27 306 aaPredicted RBP13.39□□□□□ -0.27
AP004608.1-201ENST00000531319 FAM168BA1KXE4 195 aa13.38□□□□□ -0.27
AP004608.1-201ENST00000531319 C3orf79P0CE67 100 aa13.38□□□□□ -0.27
AP004608.1-201ENST00000531319 IGKCP01834 107 aa13.36□□□□□ -0.27
AP004608.1-201ENST00000531319 LINC01545Q5VT33 79 aa13.36□□□□□ -0.27
AP004608.1-201ENST00000531319 TSPEAR-AS2P59090 65 aa13.35□□□□□ -0.27
AP004608.1-201ENST00000531319 HIST3H2BBQ8N257 126 aa13.35□□□□□ -0.27
AP004608.1-201ENST00000531319 PET117Q6UWS5 81 aa13.33□□□□□ -0.28
AP004608.1-201ENST00000531319 XAGE1AQ9HD64 81 aa13.33□□□□□ -0.28
AP004608.1-201ENST00000531319 PLA2G1BP04054 148 aaKnown RBP13.3□□□□□ -0.28
AP004608.1-201ENST00000531319 KRTDAPP60985 99 aa13.3□□□□□ -0.28
AP004608.1-201ENST00000531319 RPL37AP61513 92 aaKnown RBP13.3□□□□□ -0.28
AP004608.1-201ENST00000531319 MYCBP2O75592 4640 aa13.3□□□□□ -0.28
AP004608.1-201ENST00000531319 FAM19A5Q7Z5A7 132 aaPredicted RBP13.3□□□□□ -0.28
AP004608.1-201ENST00000531319 HIST1H2BLQ99880 126 aa13.3□□□□□ -0.28
AP004608.1-201ENST00000531319 ERG28Q9UKR5 140 aa13.3□□□□□ -0.28
AP004608.1-201ENST00000531319 LEPROTO15243 131 aa13.29□□□□□ -0.28
AP004608.1-201ENST00000531319 SERTAD4-AS1Q5TG53 156 aa13.29□□□□□ -0.28
AP004608.1-201ENST00000531319 PHF5AQ7RTV0 110 aaKnown RBP13.29□□□□□ -0.28
AP004608.1-201ENST00000531319 PFN2P35080 140 aa13.28□□□□□ -0.28
AP004608.1-201ENST00000531319 HNRNPA3P51991 378 aaKnown RBP13.27□□□□□ -0.29
AP004608.1-201ENST00000531319 SFTA2Q6UW10 78 aa13.27□□□□□ -0.29
AP004608.1-201ENST00000531319 KRTAP11-1Q8IUC1 163 aa13.26□□□□□ -0.29
AP004608.1-201ENST00000531319 C7orf33Q8WU49 177 aa13.26□□□□□ -0.29
AP004608.1-201ENST00000531319 NDUFA12Q9UI09 145 aa13.26□□□□□ -0.29
AP004608.1-201ENST00000531319 J3QQQ9 107 aa13.25□□□□□ -0.29
AP004608.1-201ENST00000531319 INAFM2P0DMQ5 153 aa13.25□□□□□ -0.29
AP004608.1-201ENST00000531319 SNRPEP62304 92 aaKnown RBP13.25□□□□□ -0.29
AP004608.1-201ENST00000531319 PLEKHB2Q96CS7 222 aa13.24□□□□□ -0.29
AP004608.1-201ENST00000531319 E9PLD3 99 aa13.23□□□□□ -0.29
AP004608.1-201ENST00000531319 S100A6P06703 90 aa13.23□□□□□ -0.29
AP004608.1-201ENST00000531319 HERVK_113P61574 105 aa13.23□□□□□ -0.29
AP004608.1-201ENST00000531319 PRR3P79522 188 aaKnown RBP13.23□□□□□ -0.29
AP004608.1-201ENST00000531319 COX17Q14061 63 aa13.23□□□□□ -0.29
AP004608.1-201ENST00000531319 PKHD1L1Q86WI1 4243 aa13.23□□□□□ -0.29
AP004608.1-201ENST00000531319 C5orf52A6NGY3 159 aa13.22□□□□□ -0.29
AP004608.1-201ENST00000531319 M0QXV9 152 aa13.22□□□□□ -0.29
AP004608.1-201ENST00000531319 SND1-IT1Q9HBX3 110 aa13.22□□□□□ -0.29
AP004608.1-201ENST00000531319 FLG2Q5D862 2391 aaPredicted RBP13.22□□□□□ -0.29
AP004608.1-201ENST00000531319 SMIM13P0DJ93 91 aa13.21□□□□□ -0.3
AP004608.1-201ENST00000531319 S100A2P29034 98 aa13.21□□□□□ -0.3
AP004608.1-201ENST00000531319 Q8NDZ9 215 aa13.21□□□□□ -0.3
AP004608.1-201ENST00000531319 IGKV2D-26A0A0A0MRZ7 120 aa13.2□□□□□ -0.3
AP004608.1-201ENST00000531319 A0A0U1RRA0 63 aa13.2□□□□□ -0.3
AP004608.1-201ENST00000531319 MYMXA0A1B0GTQ4 84 aa13.2□□□□□ -0.3
AP004608.1-201ENST00000531319 HERV-K104P63124 156 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms