RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 K7EP34 96 aa7.25□□□□□ -1.25
CAPN1-221ENST00000531068 LECT2O14960 151 aa7.25□□□□□ -1.25
CAPN1-221ENST00000531068 FABP2P12104 132 aa7.25□□□□□ -1.25
CAPN1-221ENST00000531068 MIAQ16674 131 aa7.25□□□□□ -1.25
CAPN1-221ENST00000531068 C14orf177Q52M58 125 aa7.25□□□□□ -1.25
CAPN1-221ENST00000531068 ENHOQ6UWT2 76 aa7.25□□□□□ -1.25
CAPN1-221ENST00000531068 Q6ZVH6 145 aa7.25□□□□□ -1.25
CAPN1-221ENST00000531068 TTTY13Q9BZ97 58 aa7.25□□□□□ -1.25
CAPN1-221ENST00000531068 UBE2D4Q9Y2X8 147 aa7.25□□□□□ -1.25
CAPN1-221ENST00000531068 HSPG2P98160 4391 aa7.24□□□□□ -1.25
CAPN1-221ENST00000531068 J3QQQ9 107 aa7.24□□□□□ -1.25
CAPN1-221ENST00000531068 ZNF22P17026 224 aaPredicted RBP7.24□□□□□ -1.25
CAPN1-221ENST00000531068 RBX1P62877 108 aa7.24□□□□□ -1.25
CAPN1-221ENST00000531068 WFDC2Q14508 124 aa7.24□□□□□ -1.25
CAPN1-221ENST00000531068 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.23□□□□□ -1.25
CAPN1-221ENST00000531068 IGKV2-29A2NJV5 120 aaPredicted RBP7.23□□□□□ -1.25
CAPN1-221ENST00000531068 FAM229AH3BQW9 127 aa7.23□□□□□ -1.25
CAPN1-221ENST00000531068 H3BUT2 72 aa7.23□□□□□ -1.25
CAPN1-221ENST00000531068 UBE2D1P51668 147 aa7.23□□□□□ -1.25
CAPN1-221ENST00000531068 GAGE6Q13070 117 aa7.23□□□□□ -1.25
CAPN1-221ENST00000531068 TMEM170BQ5T4T1 132 aa7.23□□□□□ -1.25
CAPN1-221ENST00000531068 OPRPNQ99935 248 aaPredicted RBP7.23□□□□□ -1.25
CAPN1-221ENST00000531068 TMEM243Q9BU79 118 aa7.23□□□□□ -1.25
CAPN1-221ENST00000531068 PRR34Q9NV39 138 aa7.23□□□□□ -1.25
CAPN1-221ENST00000531068 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.22□□□□□ -1.25
CAPN1-221ENST00000531068 IGLV5-45A0A087WSX0 123 aa7.22□□□□□ -1.25
CAPN1-221ENST00000531068 A0A1B0GUV1 79 aa7.22□□□□□ -1.25
CAPN1-221ENST00000531068 LGALS3P17931 250 aaKnown RBP7.22□□□□□ -1.25
CAPN1-221ENST00000531068 SCGB1D4Q6XE38 83 aa7.22□□□□□ -1.25
CAPN1-221ENST00000531068 LINC00269Q8N2A0 174 aa7.22□□□□□ -1.25
CAPN1-221ENST00000531068 IGHV1-58A0A0C4DH39 117 aa7.21□□□□□ -1.26
CAPN1-221ENST00000531068 UBE2L6O14933 153 aa7.21□□□□□ -1.26
CAPN1-221ENST00000531068 NHP2Q9NX24 153 aaKnown RBP7.21□□□□□ -1.26
CAPN1-221ENST00000531068 ABCA13Q86UQ4 5058 aa7.2□□□□□ -1.26
CAPN1-221ENST00000531068 TRAV8-4A0A0B4J246 113 aa7.2□□□□□ -1.26
CAPN1-221ENST00000531068 A0A0J9YXV3 536 aa7.2□□□□□ -1.26
CAPN1-221ENST00000531068 TIMM17BO60830 172 aa7.2□□□□□ -1.26
CAPN1-221ENST00000531068 REG3AQ06141 175 aa7.2□□□□□ -1.26
CAPN1-221ENST00000531068 SRSF9Q13242 221 aaKnown RBP eCLIP7.2□□□□□ -1.26
CAPN1-221ENST00000531068 PPDPFQ9H3Y8 114 aa7.2□□□□□ -1.26
CAPN1-221ENST00000531068 CDC42SE2Q9NRR3 84 aa7.2□□□□□ -1.26
CAPN1-221ENST00000531068 SPCS1Q9Y6A9 102 aa7.2□□□□□ -1.26
CAPN1-221ENST00000531068 APOBP04114 4563 aaKnown RBP7.2□□□□□ -1.26
CAPN1-221ENST00000531068 A0A0J9YXY3 114 aa7.19□□□□□ -1.26
CAPN1-221ENST00000531068 TMEM238C9JI98 176 aa7.19□□□□□ -1.26
CAPN1-221ENST00000531068 SMR3BP02814 79 aaPredicted RBP7.19□□□□□ -1.26
CAPN1-221ENST00000531068 LYRM7Q5U5X0 104 aa7.19□□□□□ -1.26
CAPN1-221ENST00000531068 Q5VSD8 79 aa7.19□□□□□ -1.26
CAPN1-221ENST00000531068 Q6ZUT4 128 aa7.19□□□□□ -1.26
CAPN1-221ENST00000531068 FAM30AQ9NZY2 134 aa7.19□□□□□ -1.26
CAPN1-221ENST00000531068 IGLV4-60A0A075B6I1 120 aa7.18□□□□□ -1.26
CAPN1-221ENST00000531068 USP17L23D6RBM5 183 aa7.18□□□□□ -1.26
CAPN1-221ENST00000531068 F8W1H4 67 aa7.18□□□□□ -1.26
CAPN1-221ENST00000531068 INAFM2P0DMQ5 153 aa7.18□□□□□ -1.26
CAPN1-221ENST00000531068 TSPEAR-AS2P59090 65 aa7.18□□□□□ -1.26
CAPN1-221ENST00000531068 HERVK_113P63121 156 aa7.18□□□□□ -1.26
CAPN1-221ENST00000531068 DGAT2L7PQ6IED9 249 aa7.18□□□□□ -1.26
CAPN1-221ENST00000531068 Q6ZSA8 131 aa7.18□□□□□ -1.26
CAPN1-221ENST00000531068 RAB37Q96AX2 223 aa7.18□□□□□ -1.26
CAPN1-221ENST00000531068 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.17□□□□□ -1.26
CAPN1-221ENST00000531068 RPL24P83731 157 aaKnown RBP7.17□□□□□ -1.26
CAPN1-221ENST00000531068 CLPSL2Q6UWE3 100 aa7.17□□□□□ -1.26
CAPN1-221ENST00000531068 SPANXDQ9BXN6 97 aa7.17□□□□□ -1.26
CAPN1-221ENST00000531068 SPANXCQ9NY87 97 aa7.17□□□□□ -1.26
CAPN1-221ENST00000531068 CBY1Q9Y3M2 126 aa7.17□□□□□ -1.26
CAPN1-221ENST00000531068 A0A0B4J2C4 111 aa7.16□□□□□ -1.26
CAPN1-221ENST00000531068 IGLV5-39A0A0G2JS06 123 aa7.16□□□□□ -1.26
CAPN1-221ENST00000531068 K7ERU9 68 aa7.16□□□□□ -1.26
CAPN1-221ENST00000531068 IFITM1P13164 125 aa7.16□□□□□ -1.26
CAPN1-221ENST00000531068 HAMPP81172 84 aa7.16□□□□□ -1.26
CAPN1-221ENST00000531068 OCIAD2Q56VL3 154 aa7.16□□□□□ -1.26
CAPN1-221ENST00000531068 GEMIN7Q9H840 131 aaKnown RBP7.16□□□□□ -1.26
CAPN1-221ENST00000531068 IGLV10-54A0A075B6I4 117 aa7.15□□□□□ -1.26
CAPN1-221ENST00000531068 TRBV20-1A0A075B6N2 111 aa7.15□□□□□ -1.26
CAPN1-221ENST00000531068 PLA2G1BP04054 148 aaKnown RBP7.15□□□□□ -1.26
CAPN1-221ENST00000531068 LINC01620Q4KN68 170 aa7.15□□□□□ -1.26
CAPN1-221ENST00000531068 RNASE13Q5GAN3 156 aaKnown RBP7.15□□□□□ -1.26
CAPN1-221ENST00000531068 KRTAP26-1Q6PEX3 210 aa7.15□□□□□ -1.26
CAPN1-221ENST00000531068 K7ERJ3 54 aa7.14□□□□□ -1.27
CAPN1-221ENST00000531068 CFAP161Q6P656 301 aa7.14□□□□□ -1.27
CAPN1-221ENST00000531068 COPS9Q8WXC6 57 aa7.14□□□□□ -1.27
CAPN1-221ENST00000531068 TMEM101Q96IK0 257 aa7.14□□□□□ -1.27
CAPN1-221ENST00000531068 PRO1854Q9UHT4 67 aa7.14□□□□□ -1.27
CAPN1-221ENST00000531068 NDUFA12Q9UI09 145 aa7.14□□□□□ -1.27
CAPN1-221ENST00000531068 NDUFA1O15239 70 aa7.13□□□□□ -1.27
CAPN1-221ENST00000531068 CFC1BP0CG36 223 aa7.13□□□□□ -1.27
CAPN1-221ENST00000531068 CFC1P0CG37 223 aa7.13□□□□□ -1.27
CAPN1-221ENST00000531068 LINC00242Q5T6M2 205 aa7.13□□□□□ -1.27
CAPN1-221ENST00000531068 LITAFQ99732 161 aa7.13□□□□□ -1.27
CAPN1-221ENST00000531068 M0QXV9 152 aa7.12□□□□□ -1.27
CAPN1-221ENST00000531068 HERV-K104P63124 156 aa7.12□□□□□ -1.27
CAPN1-221ENST00000531068 COX6A2Q02221 97 aa7.12□□□□□ -1.27
CAPN1-221ENST00000531068 SCXQ7RTU7 201 aa7.12□□□□□ -1.27
CAPN1-221ENST00000531068 C9orf163Q8N9P6 203 aa7.12□□□□□ -1.27
CAPN1-221ENST00000531068 IGKV3OR2-268A0A0C4DH90 116 aa7.11□□□□□ -1.27
CAPN1-221ENST00000531068 GAGE12HA6NDE8 117 aa7.11□□□□□ -1.27
CAPN1-221ENST00000531068 TSPAN13O95857 204 aa7.11□□□□□ -1.27
CAPN1-221ENST00000531068 CNBPP62633 177 aaKnown RBP7.11□□□□□ -1.27
CAPN1-221ENST00000531068 CIRBPQ14011 172 aaKnown RBP7.11□□□□□ -1.27
CAPN1-221ENST00000531068 SFTA2Q6UW10 78 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms