RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CYSRT1A8MQ03 144 aa10.62□□□□□ -0.71
USP47-207ENST00000527733 FUSP35637 526 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP47-207ENST00000527733 COX6A2Q02221 97 aa10.61□□□□□ -0.71
USP47-207ENST00000527733 MUC7Q8TAX7 377 aa10.61□□□□□ -0.71
USP47-207ENST00000527733 ANAPC13Q9BS18 74 aa10.61□□□□□ -0.71
USP47-207ENST00000527733 COX17Q14061 63 aa10.61□□□□□ -0.71
USP47-207ENST00000527733 WFDC10BQ8IUB3 73 aa10.6□□□□□ -0.71
USP47-207ENST00000527733 TEP1Q99973 2627 aaKnown RBP10.6□□□□□ -0.71
USP47-207ENST00000527733 JMJD7-PLA2G4BH0Y9G9 81 aa10.6□□□□□ -0.71
USP47-207ENST00000527733 DMXL2Q8TDJ6 3036 aa10.6□□□□□ -0.71
USP47-207ENST00000527733 TCL1BO95988 128 aa10.59□□□□□ -0.71
USP47-207ENST00000527733 TMEM256-PLSCR3K7ERE1 68 aa10.59□□□□□ -0.71
USP47-207ENST00000527733 FAM19A5Q7Z5A7 132 aaPredicted RBP10.59□□□□□ -0.71
USP47-207ENST00000527733 SBSPONQ8IVN8 264 aa10.59□□□□□ -0.71
USP47-207ENST00000527733 A8MTW9 85 aa10.58□□□□□ -0.72
USP47-207ENST00000527733 UNQ6190/PRO20217Q6UXQ8 127 aa10.58□□□□□ -0.72
USP47-207ENST00000527733 LOC400499M0QZD8 3231 aa10.58□□□□□ -0.72
USP47-207ENST00000527733 DMXL1Q9Y485 3027 aa10.58□□□□□ -0.72
USP47-207ENST00000527733 HIGD2AQ9BW72 106 aa10.58□□□□□ -0.72
USP47-207ENST00000527733 hADV29S1A0JD25 119 aa10.57□□□□□ -0.72
USP47-207ENST00000527733 LINC01546A6NGU7 62 aa10.57□□□□□ -0.72
USP47-207ENST00000527733 ACYP1P07311 99 aa10.57□□□□□ -0.72
USP47-207ENST00000527733 NTM-AS1Q6ZSK4 140 aa10.57□□□□□ -0.72
USP47-207ENST00000527733 LOC107984640A0A0U1RRK4 108 aa10.56□□□□□ -0.72
USP47-207ENST00000527733 KRTAP10-3P60369 221 aa10.56□□□□□ -0.72
USP47-207ENST00000527733 EGFEM1PQ0D2K5 195 aa10.56□□□□□ -0.72
USP47-207ENST00000527733 C6orf99Q4VX62 202 aa10.56□□□□□ -0.72
USP47-207ENST00000527733 B9D2Q9BPU9 175 aa10.56□□□□□ -0.72
USP47-207ENST00000527733 TRBV30A0A0K0K1B3 111 aa10.56□□□□□ -0.72
USP47-207ENST00000527733 TRIAP1O43715 76 aa10.56□□□□□ -0.72
USP47-207ENST00000527733 Q8NAQ8 132 aa10.56□□□□□ -0.72
USP47-207ENST00000527733 TSPEAR-AS2P59090 65 aa10.55□□□□□ -0.72
USP47-207ENST00000527733 FLNCQ14315 2725 aa10.55□□□□□ -0.72
USP47-207ENST00000527733 RBM3P98179 157 aaKnown RBP10.55□□□□□ -0.72
USP47-207ENST00000527733 M0R378 163 aa10.54□□□□□ -0.72
USP47-207ENST00000527733 Q9UF83 564 aa10.54□□□□□ -0.72
USP47-207ENST00000527733 FAM19A1Q7Z5A9 133 aa10.54□□□□□ -0.72
USP47-207ENST00000527733 H3BNG1 76 aa10.53□□□□□ -0.72
USP47-207ENST00000527733 TRAV23DV6A0A075B6W5 121 aa10.52□□□□□ -0.72
USP47-207ENST00000527733 ADGRG4Q8IZF6 3080 aa10.52□□□□□ -0.73
USP47-207ENST00000527733 USP17L23D6RBM5 183 aa10.52□□□□□ -0.73
USP47-207ENST00000527733 TRACP01848 142 aa10.52□□□□□ -0.73
USP47-207ENST00000527733 IGKV2-28A0A075B6P5 120 aa10.51□□□□□ -0.73
USP47-207ENST00000527733 IGKV2D-28P01615 120 aa10.51□□□□□ -0.73
USP47-207ENST00000527733 LINC01561Q8N1V8 128 aa10.51□□□□□ -0.73
USP47-207ENST00000527733 C9orf116Q5BN46 136 aaPredicted RBP10.5□□□□□ -0.73
USP47-207ENST00000527733 PDE6GP18545 87 aa10.5□□□□□ -0.73
USP47-207ENST00000527733 FOXI1Q12951 378 aa10.5□□□□□ -0.73
USP47-207ENST00000527733 CSNK1G2-AS1Q8NCQ2 148 aa10.5□□□□□ -0.73
USP47-207ENST00000527733 C19orf73Q9NVV2 129 aa10.5□□□□□ -0.73
USP47-207ENST00000527733 ESRGQ1W209 222 aa10.5□□□□□ -0.73
USP47-207ENST00000527733 LINC00474Q9P2X8 69 aa10.48□□□□□ -0.73
USP47-207ENST00000527733 LINC01556Q5JQF7 62 aa10.48□□□□□ -0.73
USP47-207ENST00000527733 NREPQ16612 68 aa10.48□□□□□ -0.73
USP47-207ENST00000527733 IGHV3OR16-9A0A0B4J2B5 98 aa10.47□□□□□ -0.73
USP47-207ENST00000527733 SMIM11BQ8TCY0 68 aa10.47□□□□□ -0.73
USP47-207ENST00000527733 WDFY3Q8IZQ1 3526 aa10.47□□□□□ -0.73
USP47-207ENST00000527733 C2orf48Q96LS8 159 aa10.47□□□□□ -0.73
USP47-207ENST00000527733 F8WDY8 70 aa10.46□□□□□ -0.73
USP47-207ENST00000527733 C7orf33Q8WU49 177 aa10.46□□□□□ -0.73
USP47-207ENST00000527733 SLPIP03973 132 aa10.46□□□□□ -0.74
USP47-207ENST00000527733 ADAMTSL4-AS1Q5T5F5 129 aa10.46□□□□□ -0.74
USP47-207ENST00000527733 ATMQ13315 3056 aa10.46□□□□□ -0.74
USP47-207ENST00000527733 C14orf132Q9NPU4 83 aa10.45□□□□□ -0.74
USP47-207ENST00000527733 DMDP11532 3685 aa10.45□□□□□ -0.74
USP47-207ENST00000527733 C9orf153Q5TBE3 101 aa10.45□□□□□ -0.74
USP47-207ENST00000527733 KRTAP10-11P60412 298 aa10.45□□□□□ -0.74
USP47-207ENST00000527733 C6orf223Q8N319 242 aa10.45□□□□□ -0.74
USP47-207ENST00000527733 ZNF73O43830 326 aaPredicted RBP10.44□□□□□ -0.74
USP47-207ENST00000527733 C4orf48Q5BLP8 95 aa10.44□□□□□ -0.74
USP47-207ENST00000527733 IGLV5-39A0A0G2JS06 123 aa10.44□□□□□ -0.74
USP47-207ENST00000527733 CR1P17927 2039 aa10.44□□□□□ -0.74
USP47-207ENST00000527733 GIG44P09565 113 aaPredicted RBP10.44□□□□□ -0.74
USP47-207ENST00000527733 NDUFC2-KCTD14E9PQ53 114 aa10.43□□□□□ -0.74
USP47-207ENST00000527733 ZZEF1O43149 2961 aa10.43□□□□□ -0.74
USP47-207ENST00000527733 RPL37AP8A6NKH3 93 aa10.43□□□□□ -0.74
USP47-207ENST00000527733 LST1O00453 97 aa10.43□□□□□ -0.74
USP47-207ENST00000527733 CFAP47Q6ZTR5 3102 aa10.43□□□□□ -0.74
USP47-207ENST00000527733 Q6ZQY7 126 aa10.43□□□□□ -0.74
USP47-207ENST00000527733 DHRS4-AS1Q9P1J3 65 aa10.42□□□□□ -0.74
USP47-207ENST00000527733 BAHCC1Q9P281 2608 aa10.42□□□□□ -0.74
USP47-207ENST00000527733 STAB1Q9NY15 2570 aa10.42□□□□□ -0.74
USP47-207ENST00000527733 K7EIL1 84 aa10.41□□□□□ -0.74
USP47-207ENST00000527733 C1orf134Q5TEV5 83 aa10.41□□□□□ -0.74
USP47-207ENST00000527733 MDFIQ99750 246 aa10.41□□□□□ -0.74
USP47-207ENST00000527733 NDUFB1O75438 58 aa10.4□□□□□ -0.74
USP47-207ENST00000527733 COL6A5A8TX70 2615 aa10.4□□□□□ -0.74
USP47-207ENST00000527733 TEX49A0A1B0GTD5 131 aa10.4□□□□□ -0.75
USP47-207ENST00000527733 IGLV5-45A0A087WSX0 123 aa10.39□□□□□ -0.75
USP47-207ENST00000527733 TEX15Q9BXT5 2789 aa10.39□□□□□ -0.75
USP47-207ENST00000527733 A0A096LNI7 61 aa10.39□□□□□ -0.75
USP47-207ENST00000527733 A0A1B0GX51 115 aa10.39□□□□□ -0.75
USP47-207ENST00000527733 Q6ZRU5 148 aa10.39□□□□□ -0.75
USP47-207ENST00000527733 IGKV3D-7A0A0C4DH55 119 aa10.38□□□□□ -0.75
USP47-207ENST00000527733 TRBV10-3A0A0K0K1G6 114 aa10.38□□□□□ -0.75
USP47-207ENST00000527733 M0QXV9 152 aa10.38□□□□□ -0.75
USP47-207ENST00000527733 LRCOL1A6NCL2 159 aa10.38□□□□□ -0.75
USP47-207ENST00000527733 PRR3P79522 188 aaKnown RBP10.38□□□□□ -0.75
USP47-207ENST00000527733 NDUFC2O95298 119 aa10.38□□□□□ -0.75
USP47-207ENST00000527733 RPL28P46779 137 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms