RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 ATOH7Q8N100 152 aa13.73□□□□□ -0.21
PKP3-205ENST00000527442 PLA2G1BP04054 148 aaKnown RBP13.72□□□□□ -0.21
PKP3-205ENST00000527442 SMIM1B2RUZ4 78 aa13.71□□□□□ -0.21
PKP3-205ENST00000527442 SMIM6P0DI80 62 aa13.71□□□□□ -0.21
PKP3-205ENST00000527442 LINC00528Q8N1L1 170 aa13.71□□□□□ -0.21
PKP3-205ENST00000527442 HERVK_113P61574 105 aa13.7□□□□□ -0.22
PKP3-205ENST00000527442 HMCN2Q8NDA2 5059 aa13.69□□□□□ -0.22
PKP3-205ENST00000527442 IGLV5-39A0A0G2JS06 123 aa13.69□□□□□ -0.22
PKP3-205ENST00000527442 SPINK8P0C7L1 97 aa13.69□□□□□ -0.22
PKP3-205ENST00000527442 APOMO95445 188 aa13.68□□□□□ -0.22
PKP3-205ENST00000527442 MALP21145 153 aa13.68□□□□□ -0.22
PKP3-205ENST00000527442 Q6ZSA8 131 aa13.68□□□□□ -0.22
PKP3-205ENST00000527442 IGHV3-64A0A075B6Q5 118 aa13.67□□□□□ -0.22
PKP3-205ENST00000527442 IGHV1-58A0A0C4DH39 117 aa13.67□□□□□ -0.22
PKP3-205ENST00000527442 hDV102S1A0JD36 115 aa13.67□□□□□ -0.22
PKP3-205ENST00000527442 E9PLD3 99 aa13.67□□□□□ -0.22
PKP3-205ENST00000527442 STPG4Q8N801 248 aa13.67□□□□□ -0.22
PKP3-205ENST00000527442 LRP1Q07954 4544 aaKnown RBP13.67□□□□□ -0.22
PKP3-205ENST00000527442 HSBP1L1C9JCN9 74 aa13.66□□□□□ -0.22
PKP3-205ENST00000527442 WFDC2Q14508 124 aa13.66□□□□□ -0.22
PKP3-205ENST00000527442 C15orf56Q8N910 161 aa13.66□□□□□ -0.22
PKP3-205ENST00000527442 MAJINQ3KP22 176 aa13.65□□□□□ -0.22
PKP3-205ENST00000527442 ANKRD39Q53RE8 183 aa13.65□□□□□ -0.22
PKP3-205ENST00000527442 SERTAD4-AS1Q5TG53 156 aa13.65□□□□□ -0.22
PKP3-205ENST00000527442 CFAP161Q6P656 301 aa13.64□□□□□ -0.23
PKP3-205ENST00000527442 ORAOV1Q8WV07 137 aa13.64□□□□□ -0.23
PKP3-205ENST00000527442 VAMP8Q9BV40 100 aa13.64□□□□□ -0.23
PKP3-205ENST00000527442 GVQW2A0A096LPI5 108 aaPredicted RBP13.63□□□□□ -0.23
PKP3-205ENST00000527442 LEPROTO15243 131 aa13.63□□□□□ -0.23
PKP3-205ENST00000527442 UBR4Q5T4S7 5183 aa13.62□□□□□ -0.23
PKP3-205ENST00000527442 USP17L23D6RBM5 183 aa13.62□□□□□ -0.23
PKP3-205ENST00000527442 Q8IZM0 81 aa13.62□□□□□ -0.23
PKP3-205ENST00000527442 PLEKHB2Q96CS7 222 aa13.62□□□□□ -0.23
PKP3-205ENST00000527442 SPAG11BQ08648 103 aa13.61□□□□□ -0.23
PKP3-205ENST00000527442 KIAA0087Q14695 138 aa13.61□□□□□ -0.23
PKP3-205ENST00000527442 IGKV2D-26A0A0A0MRZ7 120 aa13.6□□□□□ -0.23
PKP3-205ENST00000527442 TSPEAR-AS2P59090 65 aa13.6□□□□□ -0.23
PKP3-205ENST00000527442 COX7B2Q8TF08 81 aa13.6□□□□□ -0.23
PKP3-205ENST00000527442 PAM16Q9Y3D7 125 aa13.6□□□□□ -0.23
PKP3-205ENST00000527442 J3QQQ9 107 aa13.59□□□□□ -0.23
PKP3-205ENST00000527442 KRTAP10-4P60372 401 aaPredicted RBP13.59□□□□□ -0.23
PKP3-205ENST00000527442 FAT3Q8TDW7 4589 aa13.59□□□□□ -0.23
PKP3-205ENST00000527442 LECT2O14960 151 aa13.58□□□□□ -0.24
PKP3-205ENST00000527442 SPATA45Q537H7 98 aa13.58□□□□□ -0.24
PKP3-205ENST00000527442 SCXQ7RTU7 201 aa13.58□□□□□ -0.24
PKP3-205ENST00000527442 TOMM7Q9P0U1 55 aa13.58□□□□□ -0.24
PKP3-205ENST00000527442 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.57□□□□□ -0.24
PKP3-205ENST00000527442 PRSS2P07478 247 aa13.57□□□□□ -0.24
PKP3-205ENST00000527442 CXCL5P42830 114 aa13.57□□□□□ -0.24
PKP3-205ENST00000527442 S100A12P80511 92 aa13.57□□□□□ -0.24
PKP3-205ENST00000527442 LINC01620Q4KN68 170 aa13.57□□□□□ -0.24
PKP3-205ENST00000527442 HIGD2BQ4VC39 106 aa13.57□□□□□ -0.24
PKP3-205ENST00000527442 C14orf177Q52M58 125 aa13.57□□□□□ -0.24
PKP3-205ENST00000527442 ZNF561-AS1K7EIQ3 104 aa13.56□□□□□ -0.24
PKP3-205ENST00000527442 LGALS3P17931 250 aaKnown RBP13.56□□□□□ -0.24
PKP3-205ENST00000527442 NMUP48645 174 aa13.56□□□□□ -0.24
PKP3-205ENST00000527442 C2orf48Q96LS8 159 aa13.56□□□□□ -0.24
PKP3-205ENST00000527442 PLA2G2DQ9UNK4 145 aa13.56□□□□□ -0.24
PKP3-205ENST00000527442 F8WDY8 70 aa13.55□□□□□ -0.24
PKP3-205ENST00000527442 SFTA2Q6UW10 78 aa13.55□□□□□ -0.24
PKP3-205ENST00000527442 C6orf226Q5I0X4 101 aa13.54□□□□□ -0.24
PKP3-205ENST00000527442 C12orf57Q99622 126 aa13.54□□□□□ -0.24
PKP3-205ENST00000527442 NDUFA1O15239 70 aa13.53□□□□□ -0.24
PKP3-205ENST00000527442 OXTP01178 125 aa13.53□□□□□ -0.24
PKP3-205ENST00000527442 LINC00518Q8N0U6 118 aa13.53□□□□□ -0.24
PKP3-205ENST00000527442 ZNF625Q96I27 306 aaPredicted RBP13.53□□□□□ -0.24
PKP3-205ENST00000527442 NDUFA12Q9UI09 145 aa13.53□□□□□ -0.24
PKP3-205ENST00000527442 LINC00526Q96FQ7 95 aa13.52□□□□□ -0.25
PKP3-205ENST00000527442 CKS1BP61024 79 aa13.51□□□□□ -0.25
PKP3-205ENST00000527442 PCP2Q8IVA1 136 aa13.51□□□□□ -0.25
PKP3-205ENST00000527442 COX8AP10176 69 aa13.5□□□□□ -0.25
PKP3-205ENST00000527442 C2orf82Q6UX34 121 aa13.5□□□□□ -0.25
PKP3-205ENST00000527442 TTTY13Q9BZ97 58 aa13.5□□□□□ -0.25
PKP3-205ENST00000527442 MYMXA0A1B0GTQ4 84 aa13.49□□□□□ -0.25
PKP3-205ENST00000527442 ZNF815PA8K554 130 aa13.49□□□□□ -0.25
PKP3-205ENST00000527442 CAMK2N2Q96S95 79 aa13.49□□□□□ -0.25
PKP3-205ENST00000527442 DLEU1O43261 78 aa13.48□□□□□ -0.25
PKP3-205ENST00000527442 CNBPP62633 177 aaKnown RBP13.48□□□□□ -0.25
PKP3-205ENST00000527442 HERV-K104P63124 156 aa13.48□□□□□ -0.25
PKP3-205ENST00000527442 BOD1L2Q8IYS8 172 aa13.48□□□□□ -0.25
PKP3-205ENST00000527442 PKHD1L1Q86WI1 4243 aa13.47□□□□□ -0.25
PKP3-205ENST00000527442 SLPIP03973 132 aa13.47□□□□□ -0.25
PKP3-205ENST00000527442 SYCNQ0VAF6 134 aa13.47□□□□□ -0.25
PKP3-205ENST00000527442 CIRBP-AS1Q8TBR5 109 aa13.47□□□□□ -0.25
PKP3-205ENST00000527442 TRBV30A0A0K0K1B3 111 aa13.46□□□□□ -0.25
PKP3-205ENST00000527442 C10orf25Q5T742 122 aa13.46□□□□□ -0.25
PKP3-205ENST00000527442 UNQ6190/PRO20217Q6UXQ8 127 aa13.46□□□□□ -0.25
PKP3-205ENST00000527442 Q6ZRU5 148 aa13.46□□□□□ -0.25
PKP3-205ENST00000527442 CARD19Q96LW7 228 aa13.46□□□□□ -0.25
PKP3-205ENST00000527442 C14orf144Q96I85 54 aa13.45□□□□□ -0.26
PKP3-205ENST00000527442 C6orf48Q9UBA6 75 aa13.45□□□□□ -0.26
PKP3-205ENST00000527442 RNF151Q2KHN1 245 aa13.44□□□□□ -0.26
PKP3-205ENST00000527442 A0A0J9YXY3 114 aa13.43□□□□□ -0.26
PKP3-205ENST00000527442 SLC25A34Q6PIV7 304 aa13.43□□□□□ -0.26
PKP3-205ENST00000527442 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.42□□□□□ -0.26
PKP3-205ENST00000527442 TP73-AS1Q9UF72 201 aa13.42□□□□□ -0.26
PKP3-205ENST00000527442 ERG28Q9UKR5 140 aa13.41□□□□□ -0.26
PKP3-205ENST00000527442 HNRNPA3P51991 378 aaKnown RBP13.4□□□□□ -0.26
PKP3-205ENST00000527442 UQCR10Q9UDW1 63 aa13.4□□□□□ -0.26
PKP3-205ENST00000527442 LINC00587B1AMM8 73 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms