RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 GAGE2BQ13066 116 aa12.44□□□□□ -0.42
EXOSC4-202ENST00000525936 C6orf226Q5I0X4 101 aa12.43□□□□□ -0.42
EXOSC4-202ENST00000525936 PACRGQ96M98 296 aaPredicted RBP12.43□□□□□ -0.42
EXOSC4-202ENST00000525936 PRSS2P07478 247 aa12.42□□□□□ -0.42
EXOSC4-202ENST00000525936 NDUFA6P56556 154 aa12.42□□□□□ -0.42
EXOSC4-202ENST00000525936 Q6ZRP5 223 aa12.42□□□□□ -0.42
EXOSC4-202ENST00000525936 TOMM7Q9P0U1 55 aa12.42□□□□□ -0.42
EXOSC4-202ENST00000525936 FLG2Q5D862 2391 aaPredicted RBP12.41□□□□□ -0.42
EXOSC4-202ENST00000525936 HSBP1O75506 76 aa12.41□□□□□ -0.42
EXOSC4-202ENST00000525936 FAM19A2Q8N3H0 131 aa12.41□□□□□ -0.42
EXOSC4-202ENST00000525936 A0A1W2PNN7 141 aa12.4□□□□□ -0.42
EXOSC4-202ENST00000525936 SERF1AO75920 110 aa12.4□□□□□ -0.42
EXOSC4-202ENST00000525936 CKS1BP61024 79 aa12.4□□□□□ -0.42
EXOSC4-202ENST00000525936 RPL37AP61513 92 aaKnown RBP12.4□□□□□ -0.42
EXOSC4-202ENST00000525936 RPL18AQ02543 176 aaKnown RBP12.4□□□□□ -0.42
EXOSC4-202ENST00000525936 IFI27L1Q96BM0 104 aa12.4□□□□□ -0.42
EXOSC4-202ENST00000525936 TRAV12-1A0A0B4J245 112 aa12.39□□□□□ -0.43
EXOSC4-202ENST00000525936 NUPR1O60356 82 aa12.39□□□□□ -0.43
EXOSC4-202ENST00000525936 IGLV5-39A0A0G2JS06 123 aa12.38□□□□□ -0.43
EXOSC4-202ENST00000525936 H3BRM9 83 aa12.38□□□□□ -0.43
EXOSC4-202ENST00000525936 SPINK8P0C7L1 97 aa12.38□□□□□ -0.43
EXOSC4-202ENST00000525936 ZNF22P17026 224 aaPredicted RBP12.38□□□□□ -0.43
EXOSC4-202ENST00000525936 C9orf116Q5BN46 136 aaPredicted RBP12.38□□□□□ -0.43
EXOSC4-202ENST00000525936 COX7B2Q8TF08 81 aa12.38□□□□□ -0.43
EXOSC4-202ENST00000525936 PKHD1L1Q86WI1 4243 aa12.38□□□□□ -0.43
EXOSC4-202ENST00000525936 NDUFC2-KCTD14E9PQ53 114 aa12.37□□□□□ -0.43
EXOSC4-202ENST00000525936 F8VRH5 84 aa12.37□□□□□ -0.43
EXOSC4-202ENST00000525936 CXCL5P42830 114 aa12.37□□□□□ -0.43
EXOSC4-202ENST00000525936 C11orf86A6NJI1 115 aa12.36□□□□□ -0.43
EXOSC4-202ENST00000525936 C7orf33Q8WU49 177 aa12.35□□□□□ -0.43
EXOSC4-202ENST00000525936 CHTOPQ9Y3Y2 248 aaKnown RBP12.35□□□□□ -0.43
EXOSC4-202ENST00000525936 HIST1H2BKO60814 126 aa12.33□□□□□ -0.44
EXOSC4-202ENST00000525936 HIST1H2BJP06899 126 aa12.33□□□□□ -0.44
EXOSC4-202ENST00000525936 HIST1H2BOP23527 126 aa12.33□□□□□ -0.44
EXOSC4-202ENST00000525936 HIST1H2BBP33778 126 aa12.33□□□□□ -0.44
EXOSC4-202ENST00000525936 HIST1H2BDP58876 126 aa12.33□□□□□ -0.44
EXOSC4-202ENST00000525936 HIST1H2BCP62807 126 aa12.33□□□□□ -0.44
EXOSC4-202ENST00000525936 HIST2H2BEQ16778 126 aa12.33□□□□□ -0.44
EXOSC4-202ENST00000525936 GAGE2EQ4V326 116 aa12.33□□□□□ -0.44
EXOSC4-202ENST00000525936 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.33□□□□□ -0.44
EXOSC4-202ENST00000525936 HIST1H2BHQ93079 126 aa12.33□□□□□ -0.44
EXOSC4-202ENST00000525936 HIST1H2BNQ99877 126 aa12.33□□□□□ -0.44
EXOSC4-202ENST00000525936 HIST1H2BMQ99879 126 aa12.33□□□□□ -0.44
EXOSC4-202ENST00000525936 GAGE2DQ9UEU5 116 aa12.33□□□□□ -0.44
EXOSC4-202ENST00000525936 LEPROTL1O95214 131 aa12.32□□□□□ -0.44
EXOSC4-202ENST00000525936 HNRNPA3P51991 378 aaKnown RBP12.32□□□□□ -0.44
EXOSC4-202ENST00000525936 KRTAP7-1Q8IUC3 87 aa12.32□□□□□ -0.44
EXOSC4-202ENST00000525936 C9orf129Q5T035 196 aaKnown RBP12.31□□□□□ -0.44
EXOSC4-202ENST00000525936 FAM168BA1KXE4 195 aa12.3□□□□□ -0.44
EXOSC4-202ENST00000525936 TMEM170BQ5T4T1 132 aa12.3□□□□□ -0.44
EXOSC4-202ENST00000525936 LRP1Q07954 4544 aaKnown RBP12.3□□□□□ -0.44
EXOSC4-202ENST00000525936 ODF1Q14990 250 aa12.29□□□□□ -0.44
EXOSC4-202ENST00000525936 PRR3P79522 188 aaKnown RBP12.28□□□□□ -0.44
EXOSC4-202ENST00000525936 HSPB8Q9UJY1 196 aa12.28□□□□□ -0.44
EXOSC4-202ENST00000525936 DMBT1Q9UGM3 2413 aaPredicted RBP12.27□□□□□ -0.44
EXOSC4-202ENST00000525936 TMEM223A0PJW6 202 aa12.27□□□□□ -0.45
EXOSC4-202ENST00000525936 S100A1P23297 94 aa12.27□□□□□ -0.45
EXOSC4-202ENST00000525936 FAT3Q8TDW7 4589 aa12.27□□□□□ -0.45
EXOSC4-202ENST00000525936 FABP4P15090 132 aa12.26□□□□□ -0.45
EXOSC4-202ENST00000525936 PHF5AQ7RTV0 110 aaKnown RBP12.26□□□□□ -0.45
EXOSC4-202ENST00000525936 KRTAP29-1A8MX34 341 aaPredicted RBP12.24□□□□□ -0.45
EXOSC4-202ENST00000525936 COA6Q5JTJ3 125 aaKnown RBP12.24□□□□□ -0.45
EXOSC4-202ENST00000525936 FAM19A5Q7Z5A7 132 aaPredicted RBP12.23□□□□□ -0.45
EXOSC4-202ENST00000525936 ZNF625Q96I27 306 aaPredicted RBP12.23□□□□□ -0.45
EXOSC4-202ENST00000525936 XAGE1AQ9HD64 81 aa12.23□□□□□ -0.45
EXOSC4-202ENST00000525936 ATP6V1G1O75348 118 aa12.22□□□□□ -0.45
EXOSC4-202ENST00000525936 HERC1Q15751 4861 aa12.22□□□□□ -0.45
EXOSC4-202ENST00000525936 H0Y8G0 127 aa12.21□□□□□ -0.45
EXOSC4-202ENST00000525936 SFTA2Q6UW10 78 aa12.21□□□□□ -0.45
EXOSC4-202ENST00000525936 KRTAP11-1Q8IUC1 163 aa12.21□□□□□ -0.45
EXOSC4-202ENST00000525936 PSORS1C2Q9UIG4 136 aa12.21□□□□□ -0.45
EXOSC4-202ENST00000525936 SRSF9Q13242 221 aaKnown RBP eCLIP12.2□□□□□ -0.46
EXOSC4-202ENST00000525936 SERTAD4-AS1Q5TG53 156 aa12.2□□□□□ -0.46
EXOSC4-202ENST00000525936 OXTP01178 125 aa12.19□□□□□ -0.46
EXOSC4-202ENST00000525936 PLNP26678 52 aa12.19□□□□□ -0.46
EXOSC4-202ENST00000525936 COX17Q14061 63 aa12.19□□□□□ -0.46
EXOSC4-202ENST00000525936 MAP1LC3CQ9BXW4 147 aa12.19□□□□□ -0.46
EXOSC4-202ENST00000525936 PLA2G2DQ9UNK4 145 aa12.19□□□□□ -0.46
EXOSC4-202ENST00000525936 M0QXV9 152 aa12.18□□□□□ -0.46
EXOSC4-202ENST00000525936 ERG28Q9UKR5 140 aa12.18□□□□□ -0.46
EXOSC4-202ENST00000525936 DPM2O94777 84 aa12.17□□□□□ -0.46
EXOSC4-202ENST00000525936 C22orf24Q9Y442 160 aa12.17□□□□□ -0.46
EXOSC4-202ENST00000525936 PFN2P35080 140 aa12.16□□□□□ -0.46
EXOSC4-202ENST00000525936 TP73-AS1Q9UF72 201 aa12.16□□□□□ -0.46
EXOSC4-202ENST00000525936 SYS1-DBNDD2H3BUS1 97 aa12.15□□□□□ -0.46
EXOSC4-202ENST00000525936 PMCHL2Q9BQD1 86 aa12.15□□□□□ -0.46
EXOSC4-202ENST00000525936 IGKCP01834 107 aa12.14□□□□□ -0.47
EXOSC4-202ENST00000525936 SPINK6Q6UWN8 80 aa12.14□□□□□ -0.47
EXOSC4-202ENST00000525936 IGLV5-37A0A075B6J1 123 aa12.13□□□□□ -0.47
EXOSC4-202ENST00000525936 SND1-IT1Q9HBX3 110 aa12.13□□□□□ -0.47
EXOSC4-202ENST00000525936 C1orf137Q5JT78 98 aa12.12□□□□□ -0.47
EXOSC4-202ENST00000525936 LEPROTO15243 131 aa12.11□□□□□ -0.47
EXOSC4-202ENST00000525936 TSPEAR-AS2P59090 65 aa12.11□□□□□ -0.47
EXOSC4-202ENST00000525936 LBHQ53QV2 105 aaPredicted RBP12.11□□□□□ -0.47
EXOSC4-202ENST00000525936 J3QL48 77 aa12.1□□□□□ -0.47
EXOSC4-202ENST00000525936 HERV-K104P63124 156 aa12.1□□□□□ -0.47
EXOSC4-202ENST00000525936 UBE2BP63146 152 aa12.1□□□□□ -0.47
EXOSC4-202ENST00000525936 LINC01545Q5VT33 79 aa12.1□□□□□ -0.47
EXOSC4-202ENST00000525936 PET117Q6UWS5 81 aa12.1□□□□□ -0.47
EXOSC4-202ENST00000525936 MRPL55Q7Z7F7 128 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms