RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 NKAPP1Q8N9T2 125 aa9.57□□□□□ -0.88
PVT1-220ENST00000524165 ALKBH7Q9BT30 221 aaPredicted RBP9.57□□□□□ -0.88
PVT1-220ENST00000524165 HIGD1CA8MV81 97 aa9.56□□□□□ -0.88
PVT1-220ENST00000524165 TEX46H3BTG2 121 aa9.56□□□□□ -0.88
PVT1-220ENST00000524165 PCOTHQ58A44 107 aa9.56□□□□□ -0.88
PVT1-220ENST00000524165 TRBV24-1A0A075B6N3 115 aa9.55□□□□□ -0.88
PVT1-220ENST00000524165 IFI27P40305 119 aaPredicted RBP9.55□□□□□ -0.88
PVT1-220ENST00000524165 RPS29P62273 56 aaKnown RBP9.54□□□□□ -0.88
PVT1-220ENST00000524165 ZNF345Q14585 488 aa9.54□□□□□ -0.88
PVT1-220ENST00000524165 CBLN2Q8IUK8 224 aa9.54□□□□□ -0.88
PVT1-220ENST00000524165 Q8N377 158 aa9.54□□□□□ -0.88
PVT1-220ENST00000524165 SPRR4Q96PI1 79 aa9.54□□□□□ -0.88
PVT1-220ENST00000524165 TMEM126AQ9H061 195 aa9.54□□□□□ -0.88
PVT1-220ENST00000524165 PYGO1Q9Y3Y4 419 aa9.54□□□□□ -0.88
PVT1-220ENST00000524165 IGLV4-3A0A075B6K6 122 aa9.53□□□□□ -0.88
PVT1-220ENST00000524165 TMEM141Q96I45 108 aa9.53□□□□□ -0.88
PVT1-220ENST00000524165 LINC00862A6NCI5 91 aa9.52□□□□□ -0.89
PVT1-220ENST00000524165 SMIM2Q9BVW6 85 aa9.52□□□□□ -0.89
PVT1-220ENST00000524165 CXCL5P42830 114 aa9.51□□□□□ -0.89
PVT1-220ENST00000524165 MRPL51Q4U2R6 128 aaKnown RBP9.51□□□□□ -0.89
PVT1-220ENST00000524165 TEX43Q6ZNM6 134 aa9.51□□□□□ -0.89
PVT1-220ENST00000524165 SYNE2Q8WXH0 6885 aaKnown RBP9.51□□□□□ -0.89
PVT1-220ENST00000524165 TMEM238C9JI98 176 aa9.5□□□□□ -0.89
PVT1-220ENST00000524165 SLC25A20O43772 301 aa9.5□□□□□ -0.89
PVT1-220ENST00000524165 RIGQ13278 110 aa9.5□□□□□ -0.89
PVT1-220ENST00000524165 SCO1O75880 301 aa9.49□□□□□ -0.89
PVT1-220ENST00000524165 FAM104BQ5XKR9 115 aa9.49□□□□□ -0.89
PVT1-220ENST00000524165 C2orf88Q9BSF0 95 aa9.49□□□□□ -0.89
PVT1-220ENST00000524165 HIGD2AQ9BW72 106 aa9.49□□□□□ -0.89
PVT1-220ENST00000524165 EIF5A2Q9GZV4 153 aaKnown RBP9.49□□□□□ -0.89
PVT1-220ENST00000524165 ZNF706Q9Y5V0 76 aaPredicted RBP9.49□□□□□ -0.89
PVT1-220ENST00000524165 MACF1Q9UPN3 7388 aaKnown RBP9.49□□□□□ -0.89
PVT1-220ENST00000524165 M0R378 163 aa9.48□□□□□ -0.89
PVT1-220ENST00000524165 TAGLN2P37802 199 aaKnown RBP9.48□□□□□ -0.89
PVT1-220ENST00000524165 COX6B2Q6YFQ2 88 aa9.48□□□□□ -0.89
PVT1-220ENST00000524165 KANTRA0A1W2PQU2 76 aa9.46□□□□□ -0.9
PVT1-220ENST00000524165 CKS2P33552 79 aa9.46□□□□□ -0.9
PVT1-220ENST00000524165 FAM19A3Q7Z5A8 133 aa9.46□□□□□ -0.9
PVT1-220ENST00000524165 KRTAP4-16G5E9R7 235 aaPredicted RBP9.45□□□□□ -0.9
PVT1-220ENST00000524165 GEMIN7Q9H840 131 aaKnown RBP9.45□□□□□ -0.9
PVT1-220ENST00000524165 CFC1P0CG37 223 aa9.44□□□□□ -0.9
PVT1-220ENST00000524165 AMELXQ99217 191 aa9.43□□□□□ -0.9
PVT1-220ENST00000524165 RAB5AP20339 215 aa9.42□□□□□ -0.9
PVT1-220ENST00000524165 ZC2HC1BQ5TFG8 222 aa9.42□□□□□ -0.9
PVT1-220ENST00000524165 CDKN2A-AS1Q9UH64 79 aa9.42□□□□□ -0.9
PVT1-220ENST00000524165 SMLR1H3BR10 107 aa9.41□□□□□ -0.9
PVT1-220ENST00000524165 HERVK_113P63121 156 aa9.41□□□□□ -0.9
PVT1-220ENST00000524165 LINC01551Q86U37 167 aa9.41□□□□□ -0.9
PVT1-220ENST00000524165 HMSDA8MTL9 139 aa9.4□□□□□ -0.9
PVT1-220ENST00000524165 TMEM250H0YL14 139 aa9.4□□□□□ -0.9
PVT1-220ENST00000524165 RAB5BP61020 215 aa9.4□□□□□ -0.9
PVT1-220ENST00000524165 SEC11AP67812 179 aa9.4□□□□□ -0.9
PVT1-220ENST00000524165 C2orf66Q6UXQ4 117 aa9.4□□□□□ -0.9
PVT1-220ENST00000524165 VCX2Q9H322 139 aa9.4□□□□□ -0.9
PVT1-220ENST00000524165 OSTCQ9NRP0 149 aa9.4□□□□□ -0.9
PVT1-220ENST00000524165 D6R8Y8 96 aa9.39□□□□□ -0.91
PVT1-220ENST00000524165 NPYP01303 97 aa9.39□□□□□ -0.91
PVT1-220ENST00000524165 VPREB1P12018 145 aa9.39□□□□□ -0.91
PVT1-220ENST00000524165 KRTAP19-1Q8IUB9 90 aa9.39□□□□□ -0.91
PVT1-220ENST00000524165 NPSP0C0P6 89 aa9.37□□□□□ -0.91
PVT1-220ENST00000524165 SSBP3-AS1Q7Z2R9 100 aa9.37□□□□□ -0.91
PVT1-220ENST00000524165 NAT8BQ9UHF3 227 aa9.37□□□□□ -0.91
PVT1-220ENST00000524165 COX7B2Q8TF08 81 aa9.36□□□□□ -0.91
PVT1-220ENST00000524165 V9GYV3 84 aa9.36□□□□□ -0.91
PVT1-220ENST00000524165 RPL24P83731 157 aaKnown RBP9.35□□□□□ -0.91
PVT1-220ENST00000524165 LINC00483Q53H64 154 aa9.35□□□□□ -0.91
PVT1-220ENST00000524165 A0A1B0GW15 77 aa9.34□□□□□ -0.91
PVT1-220ENST00000524165 SMIM1B2RUZ4 78 aa9.34□□□□□ -0.91
PVT1-220ENST00000524165 PPBPP02775 128 aa9.34□□□□□ -0.91
PVT1-220ENST00000524165 MOBPQ13875 183 aa9.34□□□□□ -0.91
PVT1-220ENST00000524165 PDZD11Q5EBL8 140 aa9.34□□□□□ -0.91
PVT1-220ENST00000524165 CYSLTR1Q9Y271 337 aa9.34□□□□□ -0.91
PVT1-220ENST00000524165 FAM74A3Q4VXF1 159 aa9.32□□□□□ -0.92
PVT1-220ENST00000524165 KRTAP9-8Q9BYQ0 159 aa9.31□□□□□ -0.92
PVT1-220ENST00000524165 IGLV9-49A0A0B4J1Y8 123 aa9.3□□□□□ -0.92
PVT1-220ENST00000524165 C9orf92A6NGG3 77 aa9.3□□□□□ -0.92
PVT1-220ENST00000524165 IGIPA6NJ69 53 aa9.3□□□□□ -0.92
PVT1-220ENST00000524165 F8W036 122 aa9.29□□□□□ -0.92
PVT1-220ENST00000524165 CEBPGP53567 150 aa9.29□□□□□ -0.92
PVT1-220ENST00000524165 AKAP14Q86UN6 197 aa9.29□□□□□ -0.92
PVT1-220ENST00000524165 SMCR5Q8TEV8 140 aa9.29□□□□□ -0.92
PVT1-220ENST00000524165 SMIM7Q9BQ49 75 aa9.29□□□□□ -0.92
PVT1-220ENST00000524165 SND1-IT1Q9HBX3 110 aa9.29□□□□□ -0.92
PVT1-220ENST00000524165 PRSS47A8MTI9 375 aa9.28□□□□□ -0.92
PVT1-220ENST00000524165 ATP5LO75964 103 aa9.28□□□□□ -0.92
PVT1-220ENST00000524165 PAPPA-AS1Q5QFB9 102 aa9.28□□□□□ -0.92
PVT1-220ENST00000524165 ORMDL3Q8N138 153 aa9.28□□□□□ -0.92
PVT1-220ENST00000524165 PFN2P35080 140 aa9.27□□□□□ -0.93
PVT1-220ENST00000524165 Q8NDZ9 215 aa9.27□□□□□ -0.93
PVT1-220ENST00000524165 SMIM27A0A1W2PRY6 76 aa9.26□□□□□ -0.93
PVT1-220ENST00000524165 S100A8P05109 93 aa9.26□□□□□ -0.93
PVT1-220ENST00000524165 RAB14P61106 215 aa9.26□□□□□ -0.93
PVT1-220ENST00000524165 GAGE2AQ6NT46 116 aa9.26□□□□□ -0.93
PVT1-220ENST00000524165 PRELID3AQ96N28 172 aa9.26□□□□□ -0.93
PVT1-220ENST00000524165 LOC389332A0A1B0GUA5 103 aa9.25□□□□□ -0.93
PVT1-220ENST00000524165 TMEM136Q6ZRR5 245 aa9.25□□□□□ -0.93
PVT1-220ENST00000524165 IGLV5-45A0A087WSX0 123 aa9.24□□□□□ -0.93
PVT1-220ENST00000524165 TINCRA0A1B0GVN0 87 aa9.22□□□□□ -0.93
PVT1-220ENST00000524165 ORMDL2Q53FV1 153 aa9.22□□□□□ -0.93
PVT1-220ENST00000524165 A0A1B0GXF2 115 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms