RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 C5orf38Q86SI9 138 aa8.1□□□□□ -1.11
VEGFA-225ENST00000523950 STPG4Q8N801 248 aa8.1□□□□□ -1.11
VEGFA-225ENST00000523950 SCGB3A1Q96QR1 104 aa8.1□□□□□ -1.11
VEGFA-225ENST00000523950 F8WDY8 70 aa8.09□□□□□ -1.11
VEGFA-225ENST00000523950 LINC00242Q5T6M2 205 aa8.09□□□□□ -1.11
VEGFA-225ENST00000523950 SDIM1Q6ZPB5 146 aa8.09□□□□□ -1.11
VEGFA-225ENST00000523950 LINC01561Q8N1V8 128 aa8.09□□□□□ -1.11
VEGFA-225ENST00000523950 CHAC1Q9BUX1 264 aa8.09□□□□□ -1.11
VEGFA-225ENST00000523950 A0A087WZ39 114 aa8.08□□□□□ -1.12
VEGFA-225ENST00000523950 HINT1P49773 126 aaPredicted RBP8.08□□□□□ -1.12
VEGFA-225ENST00000523950 BVES-AS1Q5T3Y7 98 aa8.08□□□□□ -1.12
VEGFA-225ENST00000523950 BOD1L2Q8IYS8 172 aa8.08□□□□□ -1.12
VEGFA-225ENST00000523950 C2orf48Q96LS8 159 aa8.08□□□□□ -1.12
VEGFA-225ENST00000523950 CARD19Q96LW7 228 aa8.08□□□□□ -1.12
VEGFA-225ENST00000523950 TRAV12-1A0A0B4J245 112 aa8.07□□□□□ -1.12
VEGFA-225ENST00000523950 A6NDN8 102 aa8.07□□□□□ -1.12
VEGFA-225ENST00000523950 SPAG11BQ08648 103 aa8.07□□□□□ -1.12
VEGFA-225ENST00000523950 HSD52Q0P140 79 aa8.07□□□□□ -1.12
VEGFA-225ENST00000523950 SYCNQ0VAF6 134 aa8.07□□□□□ -1.12
VEGFA-225ENST00000523950 SCXQ7RTU7 201 aa8.07□□□□□ -1.12
VEGFA-225ENST00000523950 HIGD1BQ9P298 99 aa8.07□□□□□ -1.12
VEGFA-225ENST00000523950 IGLV4-69A0A075B6H9 119 aa8.06□□□□□ -1.12
VEGFA-225ENST00000523950 EPM2AB3EWF7 344 aa8.06□□□□□ -1.12
VEGFA-225ENST00000523950 DPM2O94777 84 aa8.06□□□□□ -1.12
VEGFA-225ENST00000523950 PLNP26678 52 aa8.06□□□□□ -1.12
VEGFA-225ENST00000523950 HERVK_113P63121 156 aa8.06□□□□□ -1.12
VEGFA-225ENST00000523950 UBE2V1Q13404 147 aa8.06□□□□□ -1.12
VEGFA-225ENST00000523950 CIRBPQ14011 172 aaKnown RBP8.06□□□□□ -1.12
VEGFA-225ENST00000523950 H0Y8G0 127 aa8.05□□□□□ -1.12
VEGFA-225ENST00000523950 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.05□□□□□ -1.12
VEGFA-225ENST00000523950 FAM229AH3BQW9 127 aa8.05□□□□□ -1.12
VEGFA-225ENST00000523950 IGKCP01834 107 aa8.05□□□□□ -1.12
VEGFA-225ENST00000523950 HAMPP81172 84 aa8.05□□□□□ -1.12
VEGFA-225ENST00000523950 COX6A2Q02221 97 aa8.05□□□□□ -1.12
VEGFA-225ENST00000523950 ODF1Q14990 250 aa8.05□□□□□ -1.12
VEGFA-225ENST00000523950 CAMK2N2Q96S95 79 aa8.05□□□□□ -1.12
VEGFA-225ENST00000523950 PMVKQ15126 192 aa8.04□□□□□ -1.12
VEGFA-225ENST00000523950 ZC2HC1BQ5TFG8 222 aa8.04□□□□□ -1.12
VEGFA-225ENST00000523950 CIRBP-AS1Q8TBR5 109 aa8.04□□□□□ -1.12
VEGFA-225ENST00000523950 LINC00526Q96FQ7 95 aa8.04□□□□□ -1.12
VEGFA-225ENST00000523950 GEMIN7Q9H840 131 aaKnown RBP8.04□□□□□ -1.12
VEGFA-225ENST00000523950 PTTG1IPP53801 180 aa8.03□□□□□ -1.12
VEGFA-225ENST00000523950 TAL2Q16559 108 aa8.03□□□□□ -1.12
VEGFA-225ENST00000523950 RNF151Q2KHN1 245 aa8.03□□□□□ -1.12
VEGFA-225ENST00000523950 Q5VSD8 79 aa8.03□□□□□ -1.12
VEGFA-225ENST00000523950 C2orf91Q6ZV80 131 aa8.03□□□□□ -1.12
VEGFA-225ENST00000523950 SPACA4Q8TDM5 124 aa8.03□□□□□ -1.12
VEGFA-225ENST00000523950 CST9LQ9H4G1 147 aa8.03□□□□□ -1.12
VEGFA-225ENST00000523950 MRPL35Q9NZE8 188 aaKnown RBP8.03□□□□□ -1.12
VEGFA-225ENST00000523950 LINC00474Q9P2X8 69 aa8.03□□□□□ -1.12
VEGFA-225ENST00000523950 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.03□□□□□ -1.12
VEGFA-225ENST00000523950 TINCRA0A1B0GVN0 87 aa8.02□□□□□ -1.13
VEGFA-225ENST00000523950 H3BRM9 83 aa8.02□□□□□ -1.13
VEGFA-225ENST00000523950 NDUFA1O15239 70 aa8.02□□□□□ -1.13
VEGFA-225ENST00000523950 SMR3BP02814 79 aaPredicted RBP8.02□□□□□ -1.13
VEGFA-225ENST00000523950 ANKRD39Q53RE8 183 aa8.02□□□□□ -1.13
VEGFA-225ENST00000523950 Q6ZRU5 148 aa8.02□□□□□ -1.13
VEGFA-225ENST00000523950 KRTAP17-1Q9BYP8 105 aa8.02□□□□□ -1.13
VEGFA-225ENST00000523950 IGLV5-45A0A087WSX0 123 aa8.01□□□□□ -1.13
VEGFA-225ENST00000523950 A0A0J9YXV3 536 aa8.01□□□□□ -1.13
VEGFA-225ENST00000523950 LOC107984640A0A0U1RRK4 108 aa8.01□□□□□ -1.13
VEGFA-225ENST00000523950 F8VRH5 84 aa8.01□□□□□ -1.13
VEGFA-225ENST00000523950 PANO1I0J062 215 aa8□□□□□ -1.13
VEGFA-225ENST00000523950 TAX1BP3O14907 124 aa8□□□□□ -1.13
VEGFA-225ENST00000523950 PLA2G1BP04054 148 aaKnown RBP8□□□□□ -1.13
VEGFA-225ENST00000523950 KIAA0087Q14695 138 aa8□□□□□ -1.13
VEGFA-225ENST00000523950 LINC00528Q8N1L1 170 aa8□□□□□ -1.13
VEGFA-225ENST00000523950 KRTAP4-5Q9BYR2 181 aa8□□□□□ -1.13
VEGFA-225ENST00000523950 CDKN2A-AS1Q9UH64 79 aa8□□□□□ -1.13
VEGFA-225ENST00000523950 A0A096LNI7 61 aa7.99□□□□□ -1.13
VEGFA-225ENST00000523950 PRSS2P07478 247 aa7.99□□□□□ -1.13
VEGFA-225ENST00000523950 CHTF8P0CG12 524 aa7.99□□□□□ -1.13
VEGFA-225ENST00000523950 VAMP3Q15836 100 aa7.99□□□□□ -1.13
VEGFA-225ENST00000523950 GTF2H5Q6ZYL4 71 aa7.99□□□□□ -1.13
VEGFA-225ENST00000523950 Q8IZM0 81 aa7.99□□□□□ -1.13
VEGFA-225ENST00000523950 PLAC8Q9NZF1 115 aa7.99□□□□□ -1.13
VEGFA-225ENST00000523950 A0A087WYN8 130 aa7.98□□□□□ -1.13
VEGFA-225ENST00000523950 IGKV2-24A0A0C4DH68 120 aa7.98□□□□□ -1.13
VEGFA-225ENST00000523950 TRBV30A0A0K0K1B3 111 aa7.98□□□□□ -1.13
VEGFA-225ENST00000523950 TLX1NBP0CAT3 122 aa7.98□□□□□ -1.13
VEGFA-225ENST00000523950 DPH3Q96FX2 82 aa7.98□□□□□ -1.13
VEGFA-225ENST00000523950 C9orf118A6NHY6 69 aa7.97□□□□□ -1.13
VEGFA-225ENST00000523950 CXCL5P42830 114 aa7.97□□□□□ -1.13
VEGFA-225ENST00000523950 NMUP48645 174 aa7.97□□□□□ -1.13
VEGFA-225ENST00000523950 SMIM1B2RUZ4 78 aa7.96□□□□□ -1.14
VEGFA-225ENST00000523950 CKS1BP61024 79 aa7.96□□□□□ -1.14
VEGFA-225ENST00000523950 C6orf226Q5I0X4 101 aa7.96□□□□□ -1.14
VEGFA-225ENST00000523950 UNQ6190/PRO20217Q6UXQ8 127 aa7.96□□□□□ -1.14
VEGFA-225ENST00000523950 TOMM7Q9P0U1 55 aa7.96□□□□□ -1.14
VEGFA-225ENST00000523950 C6orf48Q9UBA6 75 aa7.96□□□□□ -1.14
VEGFA-225ENST00000523950 CBY1Q9Y3M2 126 aa7.96□□□□□ -1.14
VEGFA-225ENST00000523950 CHTOPQ9Y3Y2 248 aaKnown RBP7.96□□□□□ -1.14
VEGFA-225ENST00000523950 VPS13BQ7Z7G8 4022 aa7.95□□□□□ -1.14
VEGFA-225ENST00000523950 GAGE2BQ13066 116 aa7.95□□□□□ -1.14
VEGFA-225ENST00000523950 C10orf25Q5T742 122 aa7.95□□□□□ -1.14
VEGFA-225ENST00000523950 SMIM13P0DJ93 91 aa7.94□□□□□ -1.14
VEGFA-225ENST00000523950 HERVK_113P61574 105 aa7.94□□□□□ -1.14
VEGFA-225ENST00000523950 RPL18AQ02543 176 aaKnown RBP7.94□□□□□ -1.14
VEGFA-225ENST00000523950 E9PLD3 99 aa7.93□□□□□ -1.14
VEGFA-225ENST00000523950 INAFM2P0DMQ5 153 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms