RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 HERVK_113P63121 156 aa6.57□□□□□ -1.36
PVT1-208ENST00000519481 LBHQ53QV2 105 aaPredicted RBP6.57□□□□□ -1.36
PVT1-208ENST00000519481 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
PVT1-208ENST00000519481 Q8IZM0 81 aa6.57□□□□□ -1.36
PVT1-208ENST00000519481 AMELXQ99217 191 aa6.57□□□□□ -1.36
PVT1-208ENST00000519481 GEMIN7Q9H840 131 aaKnown RBP6.57□□□□□ -1.36
PVT1-208ENST00000519481 RNF213Q63HN8 5207 aa6.57□□□□□ -1.36
PVT1-208ENST00000519481 C9orf129Q5T035 196 aaKnown RBP6.56□□□□□ -1.36
PVT1-208ENST00000519481 ZC2HC1BQ5TFG8 222 aa6.56□□□□□ -1.36
PVT1-208ENST00000519481 LINC00173Q6ZV60 143 aa6.56□□□□□ -1.36
PVT1-208ENST00000519481 KRTAP7-1Q8IUC3 87 aa6.56□□□□□ -1.36
PVT1-208ENST00000519481 IGIPA6NJ69 53 aa6.55□□□□□ -1.36
PVT1-208ENST00000519481 NUPR1O60356 82 aa6.55□□□□□ -1.36
PVT1-208ENST00000519481 FAM19A3Q7Z5A8 133 aa6.55□□□□□ -1.36
PVT1-208ENST00000519481 LINC00469Q8N7U9 141 aa6.55□□□□□ -1.36
PVT1-208ENST00000519481 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
PVT1-208ENST00000519481 F8VRH5 84 aa6.54□□□□□ -1.36
PVT1-208ENST00000519481 ZNF861PO60384 105 aa6.54□□□□□ -1.36
PVT1-208ENST00000519481 CXCL5P42830 114 aa6.54□□□□□ -1.36
PVT1-208ENST00000519481 TIMM17AQ99595 171 aa6.54□□□□□ -1.36
PVT1-208ENST00000519481 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
PVT1-208ENST00000519481 CARHSP1Q9Y2V2 147 aaKnown RBP6.54□□□□□ -1.36
PVT1-208ENST00000519481 C22orf24Q9Y442 160 aa6.54□□□□□ -1.36
PVT1-208ENST00000519481 KRTAP1-4P0C5Y4 121 aa6.53□□□□□ -1.36
PVT1-208ENST00000519481 XAGE1AQ9HD64 81 aa6.53□□□□□ -1.36
PVT1-208ENST00000519481 CDKN2A-AS1Q9UH64 79 aa6.53□□□□□ -1.36
PVT1-208ENST00000519481 LINC01549A6NIU2 74 aa6.52□□□□□ -1.37
PVT1-208ENST00000519481 PRR4Q16378 134 aa6.52□□□□□ -1.37
PVT1-208ENST00000519481 TOMM6Q96B49 74 aa6.52□□□□□ -1.37
PVT1-208ENST00000519481 SCGB3A1Q96QR1 104 aa6.52□□□□□ -1.37
PVT1-208ENST00000519481 TP73-AS1Q9UF72 201 aa6.52□□□□□ -1.37
PVT1-208ENST00000519481 RPL28P46779 137 aaKnown RBP6.51□□□□□ -1.37
PVT1-208ENST00000519481 ERASQ7Z444 233 aa6.51□□□□□ -1.37
PVT1-208ENST00000519481 MRPL55Q7Z7F7 128 aaKnown RBP6.51□□□□□ -1.37
PVT1-208ENST00000519481 KIAA1644Q3SXP7 199 aa6.5□□□□□ -1.37
PVT1-208ENST00000519481 PDZD11Q5EBL8 140 aa6.5□□□□□ -1.37
PVT1-208ENST00000519481 TRAV9-1A0A075B6T8 112 aa6.49□□□□□ -1.37
PVT1-208ENST00000519481 TINCRA0A1B0GVN0 87 aa6.49□□□□□ -1.37
PVT1-208ENST00000519481 BCE1O60756 84 aa6.49□□□□□ -1.37
PVT1-208ENST00000519481 COX7B2Q8TF08 81 aa6.49□□□□□ -1.37
PVT1-208ENST00000519481 SMIM1B2RUZ4 78 aa6.48□□□□□ -1.37
PVT1-208ENST00000519481 S100PP25815 95 aa6.48□□□□□ -1.37
PVT1-208ENST00000519481 H3BRM9 83 aa6.47□□□□□ -1.37
PVT1-208ENST00000519481 CRYGAP11844 174 aa6.47□□□□□ -1.37
PVT1-208ENST00000519481 NKAPP1Q8N9T2 125 aa6.47□□□□□ -1.37
PVT1-208ENST00000519481 SMCO4Q9NRQ5 59 aa6.47□□□□□ -1.37
PVT1-208ENST00000519481 RPL37AP8A6NKH3 93 aa6.46□□□□□ -1.38
PVT1-208ENST00000519481 TSPAN13O95857 204 aa6.46□□□□□ -1.38
PVT1-208ENST00000519481 RAB5BP61020 215 aa6.46□□□□□ -1.38
PVT1-208ENST00000519481 PMVKQ15126 192 aa6.46□□□□□ -1.38
PVT1-208ENST00000519481 COX19Q49B96 90 aa6.46□□□□□ -1.38
PVT1-208ENST00000519481 CLLU1Q5K131 121 aa6.46□□□□□ -1.38
PVT1-208ENST00000519481 FA2HQ7L5A8 372 aa6.46□□□□□ -1.38
PVT1-208ENST00000519481 TYMSOSQ8TAI1 123 aa6.46□□□□□ -1.38
PVT1-208ENST00000519481 LINC00167Q96N53 147 aa6.46□□□□□ -1.38
PVT1-208ENST00000519481 CST9LQ9H4G1 147 aa6.46□□□□□ -1.38
PVT1-208ENST00000519481 LPAP08519 4548 aa6.46□□□□□ -1.38
PVT1-208ENST00000519481 IGLV5-45A0A087WSX0 123 aa6.45□□□□□ -1.38
PVT1-208ENST00000519481 GAGE10A6NGK3 116 aa6.45□□□□□ -1.38
PVT1-208ENST00000519481 EIF4EBP3O60516 100 aaPredicted RBP6.45□□□□□ -1.38
PVT1-208ENST00000519481 ATP5LO75964 103 aa6.45□□□□□ -1.38
PVT1-208ENST00000519481 SPINK8P0C7L1 97 aa6.45□□□□□ -1.38
PVT1-208ENST00000519481 ADCYAP1P18509 176 aa6.45□□□□□ -1.38
PVT1-208ENST00000519481 UBE2AP49459 152 aa6.45□□□□□ -1.38
PVT1-208ENST00000519481 UQCC3Q6UW78 93 aa6.45□□□□□ -1.38
PVT1-208ENST00000519481 GNB1LQ9BYB4 327 aa6.45□□□□□ -1.38
PVT1-208ENST00000519481 TMEM238LA0A1B0GVL6 79 aa6.44□□□□□ -1.38
PVT1-208ENST00000519481 IGLV5-37A0A075B6J1 123 aa6.43□□□□□ -1.38
PVT1-208ENST00000519481 A0A0U1RQV1 116 aa6.43□□□□□ -1.38
PVT1-208ENST00000519481 TMEM218A2RU14 115 aa6.43□□□□□ -1.38
PVT1-208ENST00000519481 LINC01546A6NGU7 62 aa6.43□□□□□ -1.38
PVT1-208ENST00000519481 FABP9Q0Z7S8 132 aa6.43□□□□□ -1.38
PVT1-208ENST00000519481 A0A087X002 238 aa6.42□□□□□ -1.38
PVT1-208ENST00000519481 NDUFA6P56556 154 aa6.42□□□□□ -1.38
PVT1-208ENST00000519481 PFN2P35080 140 aa6.41□□□□□ -1.38
PVT1-208ENST00000519481 SEC11CQ9BY50 192 aa6.41□□□□□ -1.38
PVT1-208ENST00000519481 IGKV2-28A0A075B6P5 120 aa6.4□□□□□ -1.38
PVT1-208ENST00000519481 IGKV2D-28P01615 120 aa6.4□□□□□ -1.38
PVT1-208ENST00000519481 IGLC3P0DOY3 106 aa6.4□□□□□ -1.38
PVT1-208ENST00000519481 RPL24P83731 157 aaKnown RBP6.4□□□□□ -1.38
PVT1-208ENST00000519481 FAM229BQ4G0N7 80 aa6.4□□□□□ -1.38
PVT1-208ENST00000519481 IGKV2D-26A0A0A0MRZ7 120 aa6.39□□□□□ -1.39
PVT1-208ENST00000519481 ANAPC11Q9NYG5 84 aa6.39□□□□□ -1.39
PVT1-208ENST00000519481 IGLV5-39A0A0G2JS06 123 aa6.38□□□□□ -1.39
PVT1-208ENST00000519481 COX17Q14061 63 aa6.38□□□□□ -1.39
PVT1-208ENST00000519481 SFTA2Q6UW10 78 aa6.38□□□□□ -1.39
PVT1-208ENST00000519481 FAM19A1Q7Z5A9 133 aa6.38□□□□□ -1.39
PVT1-208ENST00000519481 KRTAP13-1Q8IUC0 172 aa6.38□□□□□ -1.39
PVT1-208ENST00000519481 LINC00304Q8N9R0 145 aa6.38□□□□□ -1.39
PVT1-208ENST00000519481 ERG28Q9UKR5 140 aa6.38□□□□□ -1.39
PVT1-208ENST00000519481 SCO1O75880 301 aa6.37□□□□□ -1.39
PVT1-208ENST00000519481 LINC00614P0C842 121 aa6.37□□□□□ -1.39
PVT1-208ENST00000519481 ZNF22P17026 224 aaPredicted RBP6.37□□□□□ -1.39
PVT1-208ENST00000519481 RHEBQ15382 184 aa6.37□□□□□ -1.39
PVT1-208ENST00000519481 SND1-IT1Q9HBX3 110 aa6.37□□□□□ -1.39
PVT1-208ENST00000519481 RPS10P5Q9NQ39 176 aa6.37□□□□□ -1.39
PVT1-208ENST00000519481 HBDP02042 147 aa6.36□□□□□ -1.39
PVT1-208ENST00000519481 VPREB1P12018 145 aa6.36□□□□□ -1.39
PVT1-208ENST00000519481 KRTAP13-2Q52LG2 175 aa6.36□□□□□ -1.39
PVT1-208ENST00000519481 TMEM170BQ5T4T1 132 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms