RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 MIR7-3HGQ8N6C7 128 aa12.75□□□□□ -0.37
ARFGAP1-209ENST00000518794 C11orf68Q9H3H3 251 aaKnown RBP12.75□□□□□ -0.37
ARFGAP1-209ENST00000518794 A0A087WVE0 104 aa12.75□□□□□ -0.37
ARFGAP1-209ENST00000518794 FAM19A3Q7Z5A8 133 aa12.75□□□□□ -0.37
ARFGAP1-209ENST00000518794 LINC01006Q8NI28 216 aa12.74□□□□□ -0.37
ARFGAP1-209ENST00000518794 C1orf43Q9BWL3 253 aa12.74□□□□□ -0.37
ARFGAP1-209ENST00000518794 SERP2Q8N6R1 65 aa12.73□□□□□ -0.37
ARFGAP1-209ENST00000518794 LINC00337Q8N6G1 96 aa12.72□□□□□ -0.37
ARFGAP1-209ENST00000518794 COX7B2Q8TF08 81 aa12.72□□□□□ -0.37
ARFGAP1-209ENST00000518794 VWFP04275 2813 aa12.71□□□□□ -0.37
ARFGAP1-209ENST00000518794 DEFB130BP0DP73 79 aa12.71□□□□□ -0.37
ARFGAP1-209ENST00000518794 DEFB130AP0DP74 79 aa12.71□□□□□ -0.37
ARFGAP1-209ENST00000518794 C16orf74Q96GX8 76 aa12.71□□□□□ -0.37
ARFGAP1-209ENST00000518794 C19orf73Q9NVV2 129 aa12.71□□□□□ -0.37
ARFGAP1-209ENST00000518794 PFN2P35080 140 aa12.71□□□□□ -0.38
ARFGAP1-209ENST00000518794 LINC00158P58513 81 aa12.71□□□□□ -0.38
ARFGAP1-209ENST00000518794 TMEM86BQ8N661 226 aa12.71□□□□□ -0.38
ARFGAP1-209ENST00000518794 MRAPQ8TCY5 172 aa12.71□□□□□ -0.38
ARFGAP1-209ENST00000518794 IGKV2-28A0A075B6P5 120 aa12.7□□□□□ -0.38
ARFGAP1-209ENST00000518794 IGKV2D-28P01615 120 aa12.7□□□□□ -0.38
ARFGAP1-209ENST00000518794 CSNK1G2-AS1Q8NCQ2 148 aa12.69□□□□□ -0.38
ARFGAP1-209ENST00000518794 SND1-IT1Q9HBX3 110 aa12.69□□□□□ -0.38
ARFGAP1-209ENST00000518794 A0A096LPF7 62 aa12.68□□□□□ -0.38
ARFGAP1-209ENST00000518794 FHL2Q14192 279 aa12.68□□□□□ -0.38
ARFGAP1-209ENST00000518794 CLPSL2Q6UWE3 100 aa12.68□□□□□ -0.38
ARFGAP1-209ENST00000518794 PDZD2O15018 2839 aa12.68□□□□□ -0.38
ARFGAP1-209ENST00000518794 SEC61GP60059 68 aa12.68□□□□□ -0.38
ARFGAP1-209ENST00000518794 HIVEP2P31629 2446 aa12.67□□□□□ -0.38
ARFGAP1-209ENST00000518794 TRBV6-8A0A0A6YYG3 113 aa12.67□□□□□ -0.38
ARFGAP1-209ENST00000518794 TRBV6-4A0A1B0GX49 114 aa12.67□□□□□ -0.38
ARFGAP1-209ENST00000518794 CRPP02741 224 aa12.67□□□□□ -0.38
ARFGAP1-209ENST00000518794 OXLD1Q5BKU9 147 aa12.67□□□□□ -0.38
ARFGAP1-209ENST00000518794 IGLV1-51P01701 117 aa12.66□□□□□ -0.38
ARFGAP1-209ENST00000518794 COPS9Q8WXC6 57 aa12.66□□□□□ -0.38
ARFGAP1-209ENST00000518794 A0A087WYN8 130 aa12.66□□□□□ -0.38
ARFGAP1-209ENST00000518794 LINC01561Q8N1V8 128 aa12.66□□□□□ -0.38
ARFGAP1-209ENST00000518794 IGHV3OR16-9A0A0B4J2B5 98 aa12.65□□□□□ -0.38
ARFGAP1-209ENST00000518794 USP17L23D6RBM5 183 aa12.65□□□□□ -0.38
ARFGAP1-209ENST00000518794 INAFM2P0DMQ5 153 aa12.65□□□□□ -0.38
ARFGAP1-209ENST00000518794 CCL18P55774 89 aa12.65□□□□□ -0.38
ARFGAP1-209ENST00000518794 C9orf129Q5T035 196 aaKnown RBP12.65□□□□□ -0.38
ARFGAP1-209ENST00000518794 SMIM11BQ8TCY0 68 aa12.64□□□□□ -0.39
ARFGAP1-209ENST00000518794 XCL1P47992 114 aa12.64□□□□□ -0.39
ARFGAP1-209ENST00000518794 LINC00336Q6ZUF6 198 aa12.63□□□□□ -0.39
ARFGAP1-209ENST00000518794 OVOL2Q9BRP0 275 aa12.63□□□□□ -0.39
ARFGAP1-209ENST00000518794 KRTAP1-1Q07627 177 aa12.62□□□□□ -0.39
ARFGAP1-209ENST00000518794 NOTCH2Q04721 2471 aa12.62□□□□□ -0.39
ARFGAP1-209ENST00000518794 TRAV13-2A0A0B4J235 113 aa12.62□□□□□ -0.39
ARFGAP1-209ENST00000518794 LINC00846Q9NV44 126 aa12.62□□□□□ -0.39
ARFGAP1-209ENST00000518794 C14orf132Q9NPU4 83 aa12.61□□□□□ -0.39
ARFGAP1-209ENST00000518794 DNAL4O96015 105 aa12.61□□□□□ -0.39
ARFGAP1-209ENST00000518794 MALP21145 153 aa12.61□□□□□ -0.39
ARFGAP1-209ENST00000518794 PAX4O43316 350 aa12.61□□□□□ -0.39
ARFGAP1-209ENST00000518794 RPL28P46779 137 aaKnown RBP12.61□□□□□ -0.39
ARFGAP1-209ENST00000518794 GYPEP15421 78 aa12.6□□□□□ -0.39
ARFGAP1-209ENST00000518794 FASNP49327 2511 aaKnown RBP12.6□□□□□ -0.39
ARFGAP1-209ENST00000518794 LINC00959A0A1B0GUT2 108 aa12.6□□□□□ -0.39
ARFGAP1-209ENST00000518794 SLPIP03973 132 aa12.59□□□□□ -0.39
ARFGAP1-209ENST00000518794 FAM222AQ5U5X8 452 aa12.59□□□□□ -0.39
ARFGAP1-209ENST00000518794 PRO0628Q9UI54 55 aa12.59□□□□□ -0.39
ARFGAP1-209ENST00000518794 KMT2BQ9UMN6 2715 aaPredicted RBP12.59□□□□□ -0.39
ARFGAP1-209ENST00000518794 DEFB4AO15263 64 aa12.59□□□□□ -0.39
ARFGAP1-209ENST00000518794 Q6JHZ5 121 aa12.59□□□□□ -0.39
ARFGAP1-209ENST00000518794 A0A087WZ39 114 aa12.58□□□□□ -0.4
ARFGAP1-209ENST00000518794 Q8N3U1 123 aa12.58□□□□□ -0.4
ARFGAP1-209ENST00000518794 PRR3P79522 188 aaKnown RBP12.58□□□□□ -0.4
ARFGAP1-209ENST00000518794 C6orf226Q5I0X4 101 aa12.58□□□□□ -0.4
ARFGAP1-209ENST00000518794 SMR3AQ99954 134 aa12.58□□□□□ -0.4
ARFGAP1-209ENST00000518794 PKIGQ9Y2B9 76 aa12.58□□□□□ -0.4
ARFGAP1-209ENST00000518794 HELZ2Q9BYK8 2649 aaKnown RBP12.58□□□□□ -0.4
ARFGAP1-209ENST00000518794 RNASE1P07998 156 aaKnown RBP12.57□□□□□ -0.4
ARFGAP1-209ENST00000518794 HILS1P60008 231 aa12.57□□□□□ -0.4
ARFGAP1-209ENST00000518794 SPATA3Q8NHX4 192 aa12.57□□□□□ -0.4
ARFGAP1-209ENST00000518794 LECT2O14960 151 aa12.56□□□□□ -0.4
ARFGAP1-209ENST00000518794 CMC4P56277 68 aaPredicted RBP12.55□□□□□ -0.4
ARFGAP1-209ENST00000518794 KRTAP10-3P60369 221 aa12.55□□□□□ -0.4
ARFGAP1-209ENST00000518794 UNC79Q9P2D8 2635 aa12.55□□□□□ -0.4
ARFGAP1-209ENST00000518794 LINC00482Q8N8I6 264 aa12.54□□□□□ -0.4
ARFGAP1-209ENST00000518794 IGLV10-54A0A075B6I4 117 aa12.53□□□□□ -0.4
ARFGAP1-209ENST00000518794 IBA57-AS1B1ANH7 110 aa12.53□□□□□ -0.4
ARFGAP1-209ENST00000518794 WFDC9Q8NEX5 89 aa12.53□□□□□ -0.4
ARFGAP1-209ENST00000518794 C16orf95Q9H693 158 aa12.53□□□□□ -0.4
ARFGAP1-209ENST00000518794 TENM1Q9UKZ4 2725 aa12.52□□□□□ -0.4
ARFGAP1-209ENST00000518794 NCR3O14931 201 aa12.52□□□□□ -0.41
ARFGAP1-209ENST00000518794 GHRHP01286 108 aa12.52□□□□□ -0.41
ARFGAP1-209ENST00000518794 C20orf197Q8N268 126 aa12.52□□□□□ -0.41
ARFGAP1-209ENST00000518794 TRAV23DV6A0A075B6W5 121 aa12.5□□□□□ -0.41
ARFGAP1-209ENST00000518794 C9orf116Q5BN46 136 aaPredicted RBP12.5□□□□□ -0.41
ARFGAP1-209ENST00000518794 FAM236DA0A1B0GTK5 79 aa12.49□□□□□ -0.41
ARFGAP1-209ENST00000518794 NDUFC2O95298 119 aa12.49□□□□□ -0.41
ARFGAP1-209ENST00000518794 FAM236CP0DP71 79 aa12.49□□□□□ -0.41
ARFGAP1-209ENST00000518794 X6R8D5 127 aa12.49□□□□□ -0.41
ARFGAP1-209ENST00000518794 LINC00269Q8N2A0 174 aa12.49□□□□□ -0.41
ARFGAP1-209ENST00000518794 TRRAPQ9Y4A5 3859 aa12.48□□□□□ -0.41
ARFGAP1-209ENST00000518794 HECTD1Q9ULT8 2610 aa12.48□□□□□ -0.41
ARFGAP1-209ENST00000518794 SS18Q15532 418 aa12.48□□□□□ -0.41
ARFGAP1-209ENST00000518794 NDUFC2-KCTD14E9PQ53 114 aa12.46□□□□□ -0.41
ARFGAP1-209ENST00000518794 DEFB135Q30KP9 77 aa12.46□□□□□ -0.42
ARFGAP1-209ENST00000518794 ZNF561-AS1K7EIQ3 104 aa12.45□□□□□ -0.42
ARFGAP1-209ENST00000518794 FAM19A1Q7Z5A9 133 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms