RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P19-201ENST00000517578 IGHV3-23P01764 117 aa3.23□□□□□ -1.89
HMGB1P19-201ENST00000517578 PRB4P10163 310 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P19-201ENST00000517578 NANOS2P60321 138 aaKnown RBP3.23□□□□□ -1.89
HMGB1P19-201ENST00000517578 DEFB103AP81534 67 aa3.23□□□□□ -1.89
HMGB1P19-201ENST00000517578 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
HMGB1P19-201ENST00000517578 FDCSPQ8NFU4 85 aa3.23□□□□□ -1.89
HMGB1P19-201ENST00000517578 S4R3C0 116 aa3.23□□□□□ -1.89
HMGB1P19-201ENST00000517578 BRWD1Q9NSI6 2320 aa3.22□□□□□ -1.89
HMGB1P19-201ENST00000517578 IGHV3-66A0A0C4DH42 116 aa3.22□□□□□ -1.89
HMGB1P19-201ENST00000517578 PLA2G2AP14555 144 aa3.22□□□□□ -1.89
HMGB1P19-201ENST00000517578 C18orf65Q6ZTR6 163 aa3.22□□□□□ -1.89
HMGB1P19-201ENST00000517578 Q8IZM0 81 aa3.22□□□□□ -1.89
HMGB1P19-201ENST00000517578 TOMM7Q9P0U1 55 aa3.22□□□□□ -1.89
HMGB1P19-201ENST00000517578 IGLV4-60A0A075B6I1 120 aa3.21□□□□□ -1.9
HMGB1P19-201ENST00000517578 ATP6V0E1O15342 81 aa3.21□□□□□ -1.9
HMGB1P19-201ENST00000517578 SMIM29Q86T20 159 aa3.21□□□□□ -1.9
HMGB1P19-201ENST00000517578 DEFB104AQ8WTQ1 72 aa3.21□□□□□ -1.9
HMGB1P19-201ENST00000517578 ZNF706Q9Y5V0 76 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P19-201ENST00000517578 DNAJC13O75165 2243 aa3.21□□□□□ -1.9
HMGB1P19-201ENST00000517578 ABCA1O95477 2261 aa3.2□□□□□ -1.9
HMGB1P19-201ENST00000517578 ZNF318Q5VUA4 2279 aa3.2□□□□□ -1.9
HMGB1P19-201ENST00000517578 IGHV4-59P01825 116 aa3.2□□□□□ -1.9
HMGB1P19-201ENST00000517578 SPAG11AQ6PDA7 123 aa3.2□□□□□ -1.9
HMGB1P19-201ENST00000517578 Q6ZQY7 126 aa3.2□□□□□ -1.9
HMGB1P19-201ENST00000517578 KIAA0100Q14667 2235 aaKnown RBP3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 IGLV7-46A0A075B6I9 117 aa3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 A0A096LNT2 108 aa3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 IGHV4-28A0A0C4DH34 117 aa3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 IGHV4-61A0A0C4DH41 118 aa3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 ODF3BA8MYP8 253 aa3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 H0Y9P7 68 aa3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 IGHV3-11P01762 117 aa3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 COX7A1P24310 79 aa3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 LMO4P61968 165 aa3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 LINC01006Q8NI28 216 aa3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 RHPN1-AS1Q9BWJ2 59 aa3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 ARRDC1-AS1Q9H2J1 176 aa3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 PLAC8Q9NZF1 115 aa3.19□□□□□ -1.9
HMGB1P19-201ENST00000517578 A0A0C4DFX4 3053 aa3.18□□□□□ -1.9
HMGB1P19-201ENST00000517578 IGHV3OR16-8A0A075B7F1 116 aa3.18□□□□□ -1.9
HMGB1P19-201ENST00000517578 INAFM1C9JVW0 142 aa3.18□□□□□ -1.9
HMGB1P19-201ENST00000517578 DEFB112Q30KQ8 113 aa3.18□□□□□ -1.9
HMGB1P19-201ENST00000517578 LYPD2Q6UXB3 125 aa3.18□□□□□ -1.9
HMGB1P19-201ENST00000517578 COA5Q86WW8 74 aa3.18□□□□□ -1.9
HMGB1P19-201ENST00000517578 IGHV3OR16-13A0A075B7E8 117 aa3.17□□□□□ -1.9
HMGB1P19-201ENST00000517578 IGHV3-74A0A0B4J1X5 117 aa3.17□□□□□ -1.9
HMGB1P19-201ENST00000517578 TRGV4A0A0C4DH28 118 aa3.17□□□□□ -1.9
HMGB1P19-201ENST00000517578 A8MU10 97 aa3.17□□□□□ -1.9
HMGB1P19-201ENST00000517578 IGLV6-57P01721 117 aa3.17□□□□□ -1.9
HMGB1P19-201ENST00000517578 IGHV4-30-4P0DP06 118 aa3.17□□□□□ -1.9
HMGB1P19-201ENST00000517578 Q8N9W7 124 aa3.17□□□□□ -1.9
HMGB1P19-201ENST00000517578 M0R2N4 97 aa3.16□□□□□ -1.9
HMGB1P19-201ENST00000517578 ATP1A1-AS1Q5TC04 95 aa3.16□□□□□ -1.9
HMGB1P19-201ENST00000517578 C11orf71Q6IPW1 123 aa3.16□□□□□ -1.9
HMGB1P19-201ENST00000517578 ZNF702PQ9H963 129 aa3.16□□□□□ -1.9
HMGB1P19-201ENST00000517578 PLCE1Q9P212 2302 aa3.16□□□□□ -1.9
HMGB1P19-201ENST00000517578 PTPRQQ9UMZ3 2332 aa3.15□□□□□ -1.9
HMGB1P19-201ENST00000517578 IGLV5-48A0A075B6I7 105 aa3.15□□□□□ -1.91
HMGB1P19-201ENST00000517578 RTL8CO15255 209 aa3.15□□□□□ -1.91
HMGB1P19-201ENST00000517578 KPRPQ5T749 579 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P19-201ENST00000517578 Q8NAQ8 132 aa3.15□□□□□ -1.91
HMGB1P19-201ENST00000517578 URB1O60287 2271 aaKnown RBP3.14□□□□□ -1.91
HMGB1P19-201ENST00000517578 A8MTW9 85 aa3.14□□□□□ -1.91
HMGB1P19-201ENST00000517578 IGLV1-51P01701 117 aa3.14□□□□□ -1.91
HMGB1P19-201ENST00000517578 PRB3Q04118 309 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P19-201ENST00000517578 PRR4Q16378 134 aa3.14□□□□□ -1.91
HMGB1P19-201ENST00000517578 SPINK13Q1W4C9 94 aa3.14□□□□□ -1.91
HMGB1P19-201ENST00000517578 Q8N9L7 120 aa3.14□□□□□ -1.91
HMGB1P19-201ENST00000517578 TP53AIP1Q9HCN2 124 aa3.14□□□□□ -1.91
HMGB1P19-201ENST00000517578 FAM215AQ9Y5M1 114 aa3.14□□□□□ -1.91
HMGB1P19-201ENST00000517578 DEFB131BA0A096LNP1 70 aa3.13□□□□□ -1.91
HMGB1P19-201ENST00000517578 LINC00959A0A1B0GUT2 108 aa3.13□□□□□ -1.91
HMGB1P19-201ENST00000517578 A0A1B0GUV1 79 aa3.13□□□□□ -1.91
HMGB1P19-201ENST00000517578 DSCR9P59020 149 aa3.13□□□□□ -1.91
HMGB1P19-201ENST00000517578 C1orf134Q5TEV5 83 aa3.13□□□□□ -1.91
HMGB1P19-201ENST00000517578 C9orf163Q8N9P6 203 aa3.13□□□□□ -1.91
HMGB1P19-201ENST00000517578 SPRR4Q96PI1 79 aa3.13□□□□□ -1.91
HMGB1P19-201ENST00000517578 WNK2Q9Y3S1 2297 aa3.12□□□□□ -1.91
HMGB1P19-201ENST00000517578 CYSRT1A8MQ03 144 aa3.12□□□□□ -1.91
HMGB1P19-201ENST00000517578 INSP01308 110 aa3.12□□□□□ -1.91
HMGB1P19-201ENST00000517578 SPATA8Q6RVD6 105 aa3.12□□□□□ -1.91
HMGB1P19-201ENST00000517578 DEFB119Q8N690 84 aa3.12□□□□□ -1.91
HMGB1P19-201ENST00000517578 LINC00612Q8N6U2 182 aa3.12□□□□□ -1.91
HMGB1P19-201ENST00000517578 PRAC1Q96KF2 57 aa3.12□□□□□ -1.91
HMGB1P19-201ENST00000517578 DHRS4-AS1Q9P1J3 65 aa3.12□□□□□ -1.91
HMGB1P19-201ENST00000517578 KLK12Q9UKR0 248 aa3.12□□□□□ -1.91
HMGB1P19-201ENST00000517578 SORL1Q92673 2214 aa3.12□□□□□ -1.91
HMGB1P19-201ENST00000517578 KNL1Q8NG31 2342 aa3.11□□□□□ -1.91
HMGB1P19-201ENST00000517578 IGKV2D-24A0A075B6R9 120 aa3.11□□□□□ -1.91
HMGB1P19-201ENST00000517578 GVQW2A0A096LPI5 108 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P19-201ENST00000517578 A0A0J9YWU9 116 aa3.11□□□□□ -1.91
HMGB1P19-201ENST00000517578 UQCR11O14957 56 aa3.11□□□□□ -1.91
HMGB1P19-201ENST00000517578 SPINK7P58062 85 aa3.11□□□□□ -1.91
HMGB1P19-201ENST00000517578 ROMO1P60602 79 aa3.11□□□□□ -1.91
HMGB1P19-201ENST00000517578 ST20-AS1Q8NBB2 130 aa3.11□□□□□ -1.91
HMGB1P19-201ENST00000517578 Q8NBF4 154 aa3.11□□□□□ -1.91
HMGB1P19-201ENST00000517578 CHCHD10Q8WYQ3 142 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P19-201ENST00000517578 U3KQA8 63 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms