RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 FHL2Q14192 279 aa4.69□□□□□ -1.66
CPNE3-203ENST00000517490 SPART-AS1P0CW21 52 aa4.69□□□□□ -1.66
CPNE3-203ENST00000517490 HILS1P60008 231 aa4.69□□□□□ -1.66
CPNE3-203ENST00000517490 KLK12Q9UKR0 248 aa4.69□□□□□ -1.66
CPNE3-203ENST00000517490 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.69□□□□□ -1.66
CPNE3-203ENST00000517490 A0A1B0GUV1 79 aa4.69□□□□□ -1.66
CPNE3-203ENST00000517490 BPY2O14599 106 aa4.69□□□□□ -1.66
CPNE3-203ENST00000517490 SCXQ7RTU7 201 aa4.69□□□□□ -1.66
CPNE3-203ENST00000517490 ACACBO00763 2458 aa4.68□□□□□ -1.66
CPNE3-203ENST00000517490 PRR3P79522 188 aaKnown RBP4.68□□□□□ -1.66
CPNE3-203ENST00000517490 DEFB105AQ8NG35 78 aa4.68□□□□□ -1.66
CPNE3-203ENST00000517490 NOTCH2Q04721 2471 aa4.68□□□□□ -1.66
CPNE3-203ENST00000517490 LINC00575Q6W349 94 aa4.68□□□□□ -1.66
CPNE3-203ENST00000517490 KIR2DL5BQ8NHK3 375 aa4.68□□□□□ -1.66
CPNE3-203ENST00000517490 BBC3Q96PG8 261 aaPredicted RBP4.68□□□□□ -1.66
CPNE3-203ENST00000517490 C9orf66Q5T8R8 295 aa4.67□□□□□ -1.66
CPNE3-203ENST00000517490 WFDC10AQ9H1F0 79 aa4.67□□□□□ -1.66
CPNE3-203ENST00000517490 TRIOO75962 3097 aa4.67□□□□□ -1.66
CPNE3-203ENST00000517490 CFAP54Q96N23 3096 aa4.67□□□□□ -1.66
CPNE3-203ENST00000517490 FAM208BQ5VWN6 2430 aa4.67□□□□□ -1.66
CPNE3-203ENST00000517490 MIFP14174 115 aa4.67□□□□□ -1.66
CPNE3-203ENST00000517490 C4orf26Q17RF5 130 aa4.67□□□□□ -1.66
CPNE3-203ENST00000517490 LINC01547P58512 204 aaPredicted RBP4.66□□□□□ -1.66
CPNE3-203ENST00000517490 SEC61BP60468 96 aaKnown RBP4.66□□□□□ -1.66
CPNE3-203ENST00000517490 DEFB135Q30KP9 77 aa4.66□□□□□ -1.66
CPNE3-203ENST00000517490 FAM104AQ969W3 186 aa4.66□□□□□ -1.66
CPNE3-203ENST00000517490 LAMA1P25391 3075 aa4.66□□□□□ -1.66
CPNE3-203ENST00000517490 ZNF73O43830 326 aaPredicted RBP4.66□□□□□ -1.66
CPNE3-203ENST00000517490 CXCL6P80162 114 aa4.66□□□□□ -1.66
CPNE3-203ENST00000517490 ETDCA0A1B0GVM5 59 aa4.66□□□□□ -1.66
CPNE3-203ENST00000517490 Q8N3U1 123 aa4.66□□□□□ -1.66
CPNE3-203ENST00000517490 XAGE1AQ9HD64 81 aa4.66□□□□□ -1.66
CPNE3-203ENST00000517490 DEFB4AO15263 64 aa4.65□□□□□ -1.66
CPNE3-203ENST00000517490 C9orf116Q5BN46 136 aaPredicted RBP4.65□□□□□ -1.66
CPNE3-203ENST00000517490 LY6G6DO95868 133 aa4.65□□□□□ -1.67
CPNE3-203ENST00000517490 PRB1P04280 392 aa4.65□□□□□ -1.67
CPNE3-203ENST00000517490 HIVEP3Q5T1R4 2406 aa4.65□□□□□ -1.67
CPNE3-203ENST00000517490 IGKV2D-24A0A075B6R9 120 aa4.65□□□□□ -1.67
CPNE3-203ENST00000517490 IGHV4-28A0A0C4DH34 117 aa4.65□□□□□ -1.67
CPNE3-203ENST00000517490 CYSRT1A8MQ03 144 aa4.65□□□□□ -1.67
CPNE3-203ENST00000517490 M0R378 163 aa4.65□□□□□ -1.67
CPNE3-203ENST00000517490 C2orf48Q96LS8 159 aa4.65□□□□□ -1.67
CPNE3-203ENST00000517490 IGLV1-51P01701 117 aa4.64□□□□□ -1.67
CPNE3-203ENST00000517490 UNQ6190/PRO20217Q6UXQ8 127 aa4.64□□□□□ -1.67
CPNE3-203ENST00000517490 ZNF843Q8N446 348 aa4.64□□□□□ -1.67
CPNE3-203ENST00000517490 XIRP2A4UGR9 3374 aa4.64□□□□□ -1.67
CPNE3-203ENST00000517490 MPLKIPQ8TAP9 179 aa4.64□□□□□ -1.67
CPNE3-203ENST00000517490 MYO9AB2RTY4 2548 aa4.64□□□□□ -1.67
CPNE3-203ENST00000517490 LOC110117498A0A087WWA1 95 aa4.64□□□□□ -1.67
CPNE3-203ENST00000517490 LELP1Q5T871 98 aa4.64□□□□□ -1.67
CPNE3-203ENST00000517490 WFDC11Q8NEX6 87 aa4.64□□□□□ -1.67
CPNE3-203ENST00000517490 MYO18BQ8IUG5 2567 aa4.63□□□□□ -1.67
CPNE3-203ENST00000517490 MP68P56378 58 aa4.63□□□□□ -1.67
CPNE3-203ENST00000517490 UBE2BP63146 152 aa4.63□□□□□ -1.67
CPNE3-203ENST00000517490 Q6ZQT0 140 aa4.63□□□□□ -1.67
CPNE3-203ENST00000517490 LINC01006Q8NI28 216 aa4.63□□□□□ -1.67
CPNE3-203ENST00000517490 VCANP13611 3396 aa4.63□□□□□ -1.67
CPNE3-203ENST00000517490 OBSCN-AS1Q96MR7 158 aa4.63□□□□□ -1.67
CPNE3-203ENST00000517490 NAV2Q8IVL1 2488 aa4.63□□□□□ -1.67
CPNE3-203ENST00000517490 SONP18583 2426 aaKnown RBP4.62□□□□□ -1.67
CPNE3-203ENST00000517490 CHKB-CPT1BH3BT56 60 aa4.62□□□□□ -1.67
CPNE3-203ENST00000517490 C6orf223Q8N319 242 aa4.62□□□□□ -1.67
CPNE3-203ENST00000517490 K7ERS5 55 aa4.62□□□□□ -1.67
CPNE3-203ENST00000517490 TMEM254Q8TBM7 123 aa4.62□□□□□ -1.67
CPNE3-203ENST00000517490 SZT2Q5T011 3432 aa4.61□□□□□ -1.67
CPNE3-203ENST00000517490 TRBV7-6A0A0J9YX20 115 aa4.61□□□□□ -1.67
CPNE3-203ENST00000517490 CACNA1AO00555 2505 aa4.61□□□□□ -1.67
CPNE3-203ENST00000517490 C3orf84H3BNL1 204 aa4.61□□□□□ -1.67
CPNE3-203ENST00000517490 LINC00482Q8N8I6 264 aa4.61□□□□□ -1.67
CPNE3-203ENST00000517490 NDUFB1O75438 58 aa4.6□□□□□ -1.67
CPNE3-203ENST00000517490 PLA2G2AP14555 144 aa4.6□□□□□ -1.67
CPNE3-203ENST00000517490 EGFEM1PQ0D2K5 195 aa4.6□□□□□ -1.67
CPNE3-203ENST00000517490 C9orf129Q5T035 196 aaKnown RBP4.6□□□□□ -1.67
CPNE3-203ENST00000517490 SPATA3Q8NHX4 192 aa4.6□□□□□ -1.67
CPNE3-203ENST00000517490 ZNF706Q9Y5V0 76 aaPredicted RBP4.6□□□□□ -1.67
CPNE3-203ENST00000517490 UBE2AP49459 152 aa4.6□□□□□ -1.67
CPNE3-203ENST00000517490 LINC00167Q96N53 147 aa4.6□□□□□ -1.67
CPNE3-203ENST00000517490 NBEAQ8NFP9 2946 aa4.6□□□□□ -1.67
CPNE3-203ENST00000517490 PRUNE2Q8WUY3 3088 aa4.6□□□□□ -1.67
CPNE3-203ENST00000517490 FSHBP01225 129 aa4.6□□□□□ -1.67
CPNE3-203ENST00000517490 DHRS4-AS1Q9P1J3 65 aa4.6□□□□□ -1.67
CPNE3-203ENST00000517490 PTPN13Q12923 2485 aa4.59□□□□□ -1.67
CPNE3-203ENST00000517490 NANOS2P60321 138 aaKnown RBP4.59□□□□□ -1.67
CPNE3-203ENST00000517490 USP9XQ93008 2570 aaPredicted RBP4.59□□□□□ -1.68
CPNE3-203ENST00000517490 C16orf95Q9H693 158 aa4.58□□□□□ -1.68
CPNE3-203ENST00000517490 USP9YO00507 2555 aaPredicted RBP4.58□□□□□ -1.68
CPNE3-203ENST00000517490 TRAV10A0A0B4J240 114 aa4.58□□□□□ -1.68
CPNE3-203ENST00000517490 PLAC8L1A1L4L8 177 aa4.58□□□□□ -1.68
CPNE3-203ENST00000517490 A6NED7 52 aa4.58□□□□□ -1.68
CPNE3-203ENST00000517490 SYCNQ0VAF6 134 aa4.58□□□□□ -1.68
CPNE3-203ENST00000517490 VPS13AQ96RL7 3174 aa4.58□□□□□ -1.68
CPNE3-203ENST00000517490 KLKP1Q107X0 134 aa4.58□□□□□ -1.68
CPNE3-203ENST00000517490 PLA2G2DQ9UNK4 145 aa4.58□□□□□ -1.68
CPNE3-203ENST00000517490 NCOR2Q9Y618 2525 aa4.58□□□□□ -1.68
CPNE3-203ENST00000517490 CCDC168Q8NDH2 2452 aa4.57□□□□□ -1.68
CPNE3-203ENST00000517490 DSPP15924 2871 aaKnown RBP4.57□□□□□ -1.68
CPNE3-203ENST00000517490 REV3LO60673 3130 aa4.57□□□□□ -1.68
CPNE3-203ENST00000517490 A0A0J9YWU9 116 aa4.56□□□□□ -1.68
CPNE3-203ENST00000517490 IGHV4-30-4P0DP06 118 aa4.56□□□□□ -1.68
CPNE3-203ENST00000517490 FAM30AQ9NZY2 134 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms