RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 SMIM20Q8N5G0 67 aa-4.09□□□□□ -3.06
RNU6-557P-201ENST00000516842 PRAP1Q96NZ9 151 aa-4.09□□□□□ -3.06
RNU6-557P-201ENST00000516842 DMDP11532 3685 aa-4.09□□□□□ -3.06
RNU6-557P-201ENST00000516842 EIF3AQ14152 1382 aaKnown RBP-4.1□□□□□ -3.07
RNU6-557P-201ENST00000516842 FAM107AO95990 144 aa-4.1□□□□□ -3.07
RNU6-557P-201ENST00000516842 TNP1P09430 55 aa-4.1□□□□□ -3.07
RNU6-557P-201ENST00000516842 PP6455Q8WZ26 134 aa-4.1□□□□□ -3.07
RNU6-557P-201ENST00000516842 MGST2Q99735 147 aa-4.1□□□□□ -3.07
RNU6-557P-201ENST00000516842 NXT2Q9NPJ8 142 aaKnown RBP-4.1□□□□□ -3.07
RNU6-557P-201ENST00000516842 NKIRAS1Q9NYS0 192 aa-4.1□□□□□ -3.07
RNU6-557P-201ENST00000516842 TRBV20-1A0A075B6N2 111 aa-4.11□□□□□ -3.07
RNU6-557P-201ENST00000516842 PAEPP09466 180 aa-4.11□□□□□ -3.07
RNU6-557P-201ENST00000516842 TMEM244Q5VVB8 128 aa-4.11□□□□□ -3.07
RNU6-557P-201ENST00000516842 DEFB106AQ8N104 65 aa-4.11□□□□□ -3.07
RNU6-557P-201ENST00000516842 CCDC115Q96NT0 180 aa-4.11□□□□□ -3.07
RNU6-557P-201ENST00000516842 EDC4Q6P2E9 1401 aaKnown RBP-4.12□□□□□ -3.07
RNU6-557P-201ENST00000516842 IFNA1P01562 189 aa-4.12□□□□□ -3.07
RNU6-557P-201ENST00000516842 GNG3P63215 75 aa-4.12□□□□□ -3.07
RNU6-557P-201ENST00000516842 C6orf201Q7Z4U5 140 aa-4.12□□□□□ -3.07
RNU6-557P-201ENST00000516842 CTAGE3PQ8IX95 158 aa-4.12□□□□□ -3.07
RNU6-557P-201ENST00000516842 THEM6Q8WUY1 208 aa-4.12□□□□□ -3.07
RNU6-557P-201ENST00000516842 SPTSSAQ969W0 71 aa-4.12□□□□□ -3.07
RNU6-557P-201ENST00000516842 WDFY3Q8IZQ1 3526 aa-4.13□□□□□ -3.07
RNU6-557P-201ENST00000516842 SYNJ1O43426 1573 aa-4.13□□□□□ -3.07
RNU6-557P-201ENST00000516842 DHRS4L2Q6PKH6 230 aa-4.13□□□□□ -3.07
RNU6-557P-201ENST00000516842 TAC4Q86UU9 113 aa-4.13□□□□□ -3.07
RNU6-557P-201ENST00000516842 CCDC32Q9BV29 185 aa-4.13□□□□□ -3.07
RNU6-557P-201ENST00000516842 TMEM191AQ9H0A3 160 aa-4.13□□□□□ -3.07
RNU6-557P-201ENST00000516842 ARL2-SNX15V9GYD0 113 aa-4.13□□□□□ -3.07
RNU6-557P-201ENST00000516842 KIAA1551Q9HCM1 1747 aa-4.13□□□□□ -3.07
RNU6-557P-201ENST00000516842 PLB1Q6P1J6 1458 aa-4.13□□□□□ -3.07
RNU6-557P-201ENST00000516842 FYCO1Q9BQS8 1478 aa-4.13□□□□□ -3.07
RNU6-557P-201ENST00000516842 LRRC37AA6NMS7 1700 aa-4.14□□□□□ -3.07
RNU6-557P-201ENST00000516842 ANKRD36A6QL64 1941 aa-4.14□□□□□ -3.07
RNU6-557P-201ENST00000516842 MYH13Q9UKX3 1938 aa-4.14□□□□□ -3.07
RNU6-557P-201ENST00000516842 TPM2P07951 284 aa-4.14□□□□□ -3.07
RNU6-557P-201ENST00000516842 CCL7P80098 99 aa-4.14□□□□□ -3.07
RNU6-557P-201ENST00000516842 MYOZ3Q8TDC0 251 aa-4.14□□□□□ -3.07
RNU6-557P-201ENST00000516842 CFAP53Q96M91 514 aa-4.14□□□□□ -3.07
RNU6-557P-201ENST00000516842 ARL2BPQ9Y2Y0 163 aa-4.14□□□□□ -3.07
RNU6-557P-201ENST00000516842 ATP6V1DQ9Y5K8 247 aa-4.14□□□□□ -3.07
RNU6-557P-201ENST00000516842 SMIM23A6NLE4 172 aa-4.15□□□□□ -3.07
RNU6-557P-201ENST00000516842 NDUFB6O95139 128 aa-4.15□□□□□ -3.07
RNU6-557P-201ENST00000516842 WHAMMP3Q1A5X7 153 aa-4.15□□□□□ -3.07
RNU6-557P-201ENST00000516842 NMSQ5H8A3 153 aa-4.15□□□□□ -3.07
RNU6-557P-201ENST00000516842 CAMSAP1Q5T5Y3 1602 aa-4.15□□□□□ -3.07
RNU6-557P-201ENST00000516842 RGPD2P0DJD1 1756 aa-4.15□□□□□ -3.07
RNU6-557P-201ENST00000516842 TIAM2Q8IVF5 1701 aa-4.15□□□□□ -3.07
RNU6-557P-201ENST00000516842 ANKRD30AQ9BXX3 1397 aa-4.15□□□□□ -3.07
RNU6-557P-201ENST00000516842 ABCC10Q5T3U5 1492 aa-4.16□□□□□ -3.08
RNU6-557P-201ENST00000516842 LOC285095A0A1B0GVY8 99 aa-4.16□□□□□ -3.08
RNU6-557P-201ENST00000516842 ASIPP42127 132 aa-4.16□□□□□ -3.08
RNU6-557P-201ENST00000516842 TMEM2Q9UHN6 1383 aa-4.16□□□□□ -3.08
RNU6-557P-201ENST00000516842 MYOM1P52179 1685 aa-4.16□□□□□ -3.08
RNU6-557P-201ENST00000516842 DPM2O94777 84 aa-4.17□□□□□ -3.08
RNU6-557P-201ENST00000516842 MT1FP04733 61 aa-4.17□□□□□ -3.08
RNU6-557P-201ENST00000516842 CEBPGP53567 150 aa-4.17□□□□□ -3.08
RNU6-557P-201ENST00000516842 TMEM78Q5T7P6 136 aa-4.17□□□□□ -3.08
RNU6-557P-201ENST00000516842 PSME4Q14997 1843 aa-4.18□□□□□ -3.08
RNU6-557P-201ENST00000516842 OVOS2A0A0G2JMS6 1433 aa-4.18□□□□□ -3.08
RNU6-557P-201ENST00000516842 MMP24-AS1A0A0U1RRL7 71 aa-4.18□□□□□ -3.08
RNU6-557P-201ENST00000516842 V9GYQ6 96 aa-4.18□□□□□ -3.08
RNU6-557P-201ENST00000516842 TRBV7-7A0A0K0K1E9 115 aa-4.19□□□□□ -3.08
RNU6-557P-201ENST00000516842 A0A1W2PRE2 83 aa-4.19□□□□□ -3.08
RNU6-557P-201ENST00000516842 MNS1Q8NEH6 495 aa-4.19□□□□□ -3.08
RNU6-557P-201ENST00000516842 A0A1B0GWA3 101 aa-4.2□□□□□ -3.08
RNU6-557P-201ENST00000516842 LLPHQ9BRT6 129 aaKnown RBP-4.2□□□□□ -3.08
RNU6-557P-201ENST00000516842 PSMG3Q9BT73 122 aaPredicted RBP-4.2□□□□□ -3.08
RNU6-557P-201ENST00000516842 SAR1AQ9NR31 198 aa-4.2□□□□□ -3.08
RNU6-557P-201ENST00000516842 ZNF518AQ6AHZ1 1483 aa-4.2□□□□□ -3.08
RNU6-557P-201ENST00000516842 DIP2CQ9Y2E4 1556 aa-4.2□□□□□ -3.08
RNU6-557P-201ENST00000516842 ADGRL2O95490 1459 aa-4.21□□□□□ -3.08
RNU6-557P-201ENST00000516842 CHKB-CPT1BH3BT56 60 aa-4.21□□□□□ -3.08
RNU6-557P-201ENST00000516842 PRO3102Q9H379 93 aa-4.21□□□□□ -3.08
RNU6-557P-201ENST00000516842 PSENENQ9NZ42 101 aa-4.21□□□□□ -3.08
RNU6-557P-201ENST00000516842 PDCD11Q14690 1871 aaKnown RBP-4.22□□□□□ -3.08
RNU6-557P-201ENST00000516842 SCN7AQ01118 1682 aa-4.22□□□□□ -3.08
RNU6-557P-201ENST00000516842 TCTAP57738 103 aa-4.22□□□□□ -3.08
RNU6-557P-201ENST00000516842 C9orf153Q5TBE3 101 aa-4.22□□□□□ -3.08
RNU6-557P-201ENST00000516842 FAM236AA0A1B0GUQ0 79 aa-4.23□□□□□ -3.09
RNU6-557P-201ENST00000516842 FAM236BA0A1B0GV22 79 aa-4.23□□□□□ -3.09
RNU6-557P-201ENST00000516842 COX6B2Q6YFQ2 88 aa-4.23□□□□□ -3.09
RNU6-557P-201ENST00000516842 TCTE3Q8IZS6 198 aa-4.23□□□□□ -3.09
RNU6-557P-201ENST00000516842 MAPKBP1O60336 1514 aa-4.23□□□□□ -3.09
RNU6-557P-201ENST00000516842 CUX1P39880 1505 aa-4.24□□□□□ -3.09
RNU6-557P-201ENST00000516842 NCS1P62166 190 aa-4.24□□□□□ -3.09
RNU6-557P-201ENST00000516842 ATP6V1G3Q96LB4 118 aa-4.24□□□□□ -3.09
RNU6-557P-201ENST00000516842 CEP19Q96LK0 163 aa-4.24□□□□□ -3.09
RNU6-557P-201ENST00000516842 A0A0G2JND7 137 aa-4.25□□□□□ -3.09
RNU6-557P-201ENST00000516842 PLXNC1O60486 1568 aa-4.25□□□□□ -3.09
RNU6-557P-201ENST00000516842 TPM3P06753 285 aa-4.25□□□□□ -3.09
RNU6-557P-201ENST00000516842 REEP5Q00765 189 aa-4.25□□□□□ -3.09
RNU6-557P-201ENST00000516842 NUP188Q5SRE5 1749 aa-4.25□□□□□ -3.09
RNU6-557P-201ENST00000516842 CENPEQ02224 2701 aa-4.25□□□□□ -3.09
RNU6-557P-201ENST00000516842 SAA2P0DJI9 122 aaPredicted RBP-4.26□□□□□ -3.09
RNU6-557P-201ENST00000516842 LINC00158P58513 81 aa-4.26□□□□□ -3.09
RNU6-557P-201ENST00000516842 HIST1H1AQ02539 215 aaPredicted RBP-4.26□□□□□ -3.09
RNU6-557P-201ENST00000516842 MAGOHBQ96A72 148 aaKnown RBP-4.26□□□□□ -3.09
RNU6-557P-201ENST00000516842 PREX1Q8TCU6 1659 aa-4.26□□□□□ -3.09
RNU6-557P-201ENST00000516842 ARMS2P0C7Q2 107 aa-4.27□□□□□ -3.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms