RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 NDUFA1O15239 70 aa6.21□□□□□ -1.42
SCARNA16-201ENST00000515981 CDK2AP2O75956 126 aa6.21□□□□□ -1.42
SCARNA16-201ENST00000515981 SMR3BP02814 79 aaPredicted RBP6.21□□□□□ -1.42
SCARNA16-201ENST00000515981 PRSS2P07478 247 aa6.21□□□□□ -1.42
SCARNA16-201ENST00000515981 C9orf116Q5BN46 136 aaPredicted RBP6.21□□□□□ -1.42
SCARNA16-201ENST00000515981 C6orf226Q5I0X4 101 aa6.21□□□□□ -1.42
SCARNA16-201ENST00000515981 C6orf48Q9UBA6 75 aa6.21□□□□□ -1.42
SCARNA16-201ENST00000515981 A0A096LNI7 61 aa6.2□□□□□ -1.42
SCARNA16-201ENST00000515981 F8VRH5 84 aa6.2□□□□□ -1.42
SCARNA16-201ENST00000515981 COX7B2Q8TF08 81 aa6.2□□□□□ -1.42
SCARNA16-201ENST00000515981 DPH3Q96FX2 82 aa6.2□□□□□ -1.42
SCARNA16-201ENST00000515981 MAP1LC3CQ9BXW4 147 aa6.2□□□□□ -1.42
SCARNA16-201ENST00000515981 IGLV5-39A0A0G2JS06 123 aa6.19□□□□□ -1.42
SCARNA16-201ENST00000515981 CKS1BP61024 79 aa6.19□□□□□ -1.42
SCARNA16-201ENST00000515981 GAGE2BQ13066 116 aa6.19□□□□□ -1.42
SCARNA16-201ENST00000515981 SCXQ7RTU7 201 aa6.19□□□□□ -1.42
SCARNA16-201ENST00000515981 Q8IZM0 81 aa6.19□□□□□ -1.42
SCARNA16-201ENST00000515981 CIRBP-AS1Q8TBR5 109 aa6.19□□□□□ -1.42
SCARNA16-201ENST00000515981 PCLOQ9Y6V0 5065 aa6.18□□□□□ -1.42
SCARNA16-201ENST00000515981 TMEM223A0PJW6 202 aa6.18□□□□□ -1.42
SCARNA16-201ENST00000515981 F8WDY8 70 aa6.18□□□□□ -1.42
SCARNA16-201ENST00000515981 SYS1-DBNDD2H3BUS1 97 aa6.18□□□□□ -1.42
SCARNA16-201ENST00000515981 C3orf79P0CE67 100 aa6.18□□□□□ -1.42
SCARNA16-201ENST00000515981 KRTDAPP60985 99 aa6.18□□□□□ -1.42
SCARNA16-201ENST00000515981 RNF151Q2KHN1 245 aa6.18□□□□□ -1.42
SCARNA16-201ENST00000515981 MAJINQ3KP22 176 aa6.18□□□□□ -1.42
SCARNA16-201ENST00000515981 HIST3H2BBQ8N257 126 aa6.18□□□□□ -1.42
SCARNA16-201ENST00000515981 LOC107984640A0A0U1RRK4 108 aa6.17□□□□□ -1.42
SCARNA16-201ENST00000515981 DPM2O94777 84 aa6.17□□□□□ -1.42
SCARNA16-201ENST00000515981 SNRPEP62304 92 aaKnown RBP6.17□□□□□ -1.42
SCARNA16-201ENST00000515981 RPL18AQ02543 176 aaKnown RBP6.17□□□□□ -1.42
SCARNA16-201ENST00000515981 SPACA4Q8TDM5 124 aa6.17□□□□□ -1.42
SCARNA16-201ENST00000515981 PKHD1L1Q86WI1 4243 aa6.17□□□□□ -1.42
SCARNA16-201ENST00000515981 A0A087WYN8 130 aa6.16□□□□□ -1.42
SCARNA16-201ENST00000515981 TRBV30A0A0K0K1B3 111 aa6.16□□□□□ -1.42
SCARNA16-201ENST00000515981 IGKCP01834 107 aa6.16□□□□□ -1.42
SCARNA16-201ENST00000515981 S100A6P06703 90 aa6.16□□□□□ -1.42
SCARNA16-201ENST00000515981 PTTG1IPP53801 180 aa6.16□□□□□ -1.42
SCARNA16-201ENST00000515981 CIRBPQ14011 172 aaKnown RBP6.16□□□□□ -1.42
SCARNA16-201ENST00000515981 GAGE2EQ4V326 116 aa6.16□□□□□ -1.42
SCARNA16-201ENST00000515981 Q6ZRP5 223 aa6.16□□□□□ -1.42
SCARNA16-201ENST00000515981 KRTAP4-5Q9BYR2 181 aa6.16□□□□□ -1.42
SCARNA16-201ENST00000515981 GAGE2DQ9UEU5 116 aa6.16□□□□□ -1.42
SCARNA16-201ENST00000515981 A0A1W2PNN7 141 aa6.15□□□□□ -1.42
SCARNA16-201ENST00000515981 PLNP26678 52 aa6.15□□□□□ -1.42
SCARNA16-201ENST00000515981 LINC01545Q5VT33 79 aa6.15□□□□□ -1.42
SCARNA16-201ENST00000515981 PET117Q6UWS5 81 aa6.15□□□□□ -1.42
SCARNA16-201ENST00000515981 STPG4Q8N801 248 aa6.15□□□□□ -1.42
SCARNA16-201ENST00000515981 ZNF625Q96I27 306 aaPredicted RBP6.15□□□□□ -1.42
SCARNA16-201ENST00000515981 HIST1H2BLQ99880 126 aa6.15□□□□□ -1.42
SCARNA16-201ENST00000515981 S100A2P29034 98 aa6.14□□□□□ -1.43
SCARNA16-201ENST00000515981 TSPEAR-AS2P59090 65 aa6.14□□□□□ -1.43
SCARNA16-201ENST00000515981 SRRM2Q9UQ35 2752 aaKnown RBP6.13□□□□□ -1.43
SCARNA16-201ENST00000515981 FAM168BA1KXE4 195 aa6.13□□□□□ -1.43
SCARNA16-201ENST00000515981 C5orf52A6NGY3 159 aa6.13□□□□□ -1.43
SCARNA16-201ENST00000515981 NDUFC2-KCTD14E9PQ53 114 aa6.13□□□□□ -1.43
SCARNA16-201ENST00000515981 TLX1NBP0CAT3 122 aa6.13□□□□□ -1.43
SCARNA16-201ENST00000515981 CXCL5P42830 114 aa6.13□□□□□ -1.43
SCARNA16-201ENST00000515981 Q8N1X5 172 aa6.13□□□□□ -1.43
SCARNA16-201ENST00000515981 PLAC8Q9NZF1 115 aa6.13□□□□□ -1.43
SCARNA16-201ENST00000515981 LEPROTO15243 131 aa6.12□□□□□ -1.43
SCARNA16-201ENST00000515981 PFN2P35080 140 aa6.12□□□□□ -1.43
SCARNA16-201ENST00000515981 C9orf129Q5T035 196 aaKnown RBP6.12□□□□□ -1.43
SCARNA16-201ENST00000515981 ATOH7Q8N100 152 aa6.12□□□□□ -1.43
SCARNA16-201ENST00000515981 LINC00528Q8N1L1 170 aa6.12□□□□□ -1.43
SCARNA16-201ENST00000515981 XAGE1AQ9HD64 81 aa6.12□□□□□ -1.43
SCARNA16-201ENST00000515981 A0A0U1RRA0 63 aa6.11□□□□□ -1.43
SCARNA16-201ENST00000515981 KRTAP7-1Q8IUC3 87 aa6.11□□□□□ -1.43
SCARNA16-201ENST00000515981 LINC00474Q9P2X8 69 aa6.11□□□□□ -1.43
SCARNA16-201ENST00000515981 PKIGQ9Y2B9 76 aa6.11□□□□□ -1.43
SCARNA16-201ENST00000515981 TMA7Q9Y2S6 64 aaKnown RBP6.11□□□□□ -1.43
SCARNA16-201ENST00000515981 J3QQQ9 107 aa6.1□□□□□ -1.43
SCARNA16-201ENST00000515981 HERVK_113P61574 105 aa6.1□□□□□ -1.43
SCARNA16-201ENST00000515981 Q5VSD8 79 aa6.1□□□□□ -1.43
SCARNA16-201ENST00000515981 FAM19A5Q7Z5A7 132 aaPredicted RBP6.1□□□□□ -1.43
SCARNA16-201ENST00000515981 PLEKHB2Q96CS7 222 aa6.1□□□□□ -1.43
SCARNA16-201ENST00000515981 NDUFA12Q9UI09 145 aa6.1□□□□□ -1.43
SCARNA16-201ENST00000515981 ERG28Q9UKR5 140 aa6.1□□□□□ -1.43
SCARNA16-201ENST00000515981 EPM2AB3EWF7 344 aa6.09□□□□□ -1.43
SCARNA16-201ENST00000515981 FAM229AH3BQW9 127 aa6.09□□□□□ -1.43
SCARNA16-201ENST00000515981 SERTAD4-AS1Q5TG53 156 aa6.09□□□□□ -1.43
SCARNA16-201ENST00000515981 PHF5AQ7RTV0 110 aaKnown RBP6.09□□□□□ -1.43
SCARNA16-201ENST00000515981 FLG2Q5D862 2391 aaPredicted RBP6.09□□□□□ -1.43
SCARNA16-201ENST00000515981 IGKV2D-26A0A0A0MRZ7 120 aa6.08□□□□□ -1.44
SCARNA16-201ENST00000515981 C20orf202A1L168 122 aa6.08□□□□□ -1.44
SCARNA16-201ENST00000515981 E9PLD3 99 aa6.08□□□□□ -1.44
SCARNA16-201ENST00000515981 SMIM13P0DJ93 91 aa6.08□□□□□ -1.44
SCARNA16-201ENST00000515981 LGALS3P17931 250 aaKnown RBP6.08□□□□□ -1.44
SCARNA16-201ENST00000515981 LINC00158P58513 81 aa6.08□□□□□ -1.44
SCARNA16-201ENST00000515981 ANKRD39Q53RE8 183 aa6.08□□□□□ -1.44
SCARNA16-201ENST00000515981 TTTY13Q9BZ97 58 aa6.08□□□□□ -1.44
SCARNA16-201ENST00000515981 FAT3Q8TDW7 4589 aa6.07□□□□□ -1.44
SCARNA16-201ENST00000515981 MYMXA0A1B0GTQ4 84 aa6.07□□□□□ -1.44
SCARNA16-201ENST00000515981 MEIG1Q5JSS6 88 aa6.07□□□□□ -1.44
SCARNA16-201ENST00000515981 SND1-IT1Q9HBX3 110 aa6.07□□□□□ -1.44
SCARNA16-201ENST00000515981 SCGB1D1O95968 90 aa6.06□□□□□ -1.44
SCARNA16-201ENST00000515981 KRTAP10-4P60372 401 aaPredicted RBP6.06□□□□□ -1.44
SCARNA16-201ENST00000515981 RPL37AP61513 92 aaKnown RBP6.06□□□□□ -1.44
SCARNA16-201ENST00000515981 KRTAP11-1Q8IUC1 163 aa6.06□□□□□ -1.44
SCARNA16-201ENST00000515981 HERV-K104P63124 156 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms