RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 E9PLD3 99 aa13.61□□□□□ -0.23
LSM6-207ENST00000515311 LEPROTO15243 131 aa13.61□□□□□ -0.23
LSM6-207ENST00000515311 JOSD1Q15040 202 aaPredicted RBP13.61□□□□□ -0.23
LSM6-207ENST00000515311 STPG4Q8N801 248 aa13.61□□□□□ -0.23
LSM6-207ENST00000515311 PLEKHB2Q96CS7 222 aa13.61□□□□□ -0.23
LSM6-207ENST00000515311 SFTA2Q6UW10 78 aa13.6□□□□□ -0.23
LSM6-207ENST00000515311 C2orf82Q6UX34 121 aa13.6□□□□□ -0.23
LSM6-207ENST00000515311 Q6ZRU5 148 aa13.6□□□□□ -0.23
LSM6-207ENST00000515311 C9orf163Q8N9P6 203 aa13.6□□□□□ -0.23
LSM6-207ENST00000515311 HECTD4Q9Y4D8 3996 aa13.59□□□□□ -0.23
LSM6-207ENST00000515311 RNF151Q2KHN1 245 aa13.59□□□□□ -0.23
LSM6-207ENST00000515311 UNQ6190/PRO20217Q6UXQ8 127 aa13.59□□□□□ -0.23
LSM6-207ENST00000515311 TRBV30A0A0K0K1B3 111 aa13.58□□□□□ -0.24
LSM6-207ENST00000515311 FUSP35637 526 aaKnown RBP eCLIP13.58□□□□□ -0.24
LSM6-207ENST00000515311 C10orf25Q5T742 122 aa13.58□□□□□ -0.24
LSM6-207ENST00000515311 J3QQQ9 107 aa13.57□□□□□ -0.24
LSM6-207ENST00000515311 TSPEAR-AS2P59090 65 aa13.56□□□□□ -0.24
LSM6-207ENST00000515311 ZNF625Q96I27 306 aaPredicted RBP13.56□□□□□ -0.24
LSM6-207ENST00000515311 C6orf48Q9UBA6 75 aa13.56□□□□□ -0.24
LSM6-207ENST00000515311 HSBP1L1C9JCN9 74 aa13.55□□□□□ -0.24
LSM6-207ENST00000515311 LGALS3P17931 250 aaKnown RBP13.54□□□□□ -0.24
LSM6-207ENST00000515311 GCSHP23434 173 aa13.54□□□□□ -0.24
LSM6-207ENST00000515311 NMUP48645 174 aa13.54□□□□□ -0.24
LSM6-207ENST00000515311 PKIGQ9Y2B9 76 aa13.54□□□□□ -0.24
LSM6-207ENST00000515311 ANKRD39Q53RE8 183 aa13.53□□□□□ -0.24
LSM6-207ENST00000515311 PYY3Q5JQD4 70 aa13.53□□□□□ -0.24
LSM6-207ENST00000515311 NDUFA12Q9UI09 145 aa13.53□□□□□ -0.24
LSM6-207ENST00000515311 IGKV2D-26A0A0A0MRZ7 120 aa13.52□□□□□ -0.25
LSM6-207ENST00000515311 MAJINQ3KP22 176 aa13.52□□□□□ -0.25
LSM6-207ENST00000515311 LINC01620Q4KN68 170 aa13.52□□□□□ -0.25
LSM6-207ENST00000515311 MYMXA0A1B0GTQ4 84 aa13.51□□□□□ -0.25
LSM6-207ENST00000515311 C16orf90A8MZG2 172 aa13.51□□□□□ -0.25
LSM6-207ENST00000515311 HERV-K104P63124 156 aa13.51□□□□□ -0.25
LSM6-207ENST00000515311 SDIM1Q6ZPB5 146 aa13.51□□□□□ -0.25
LSM6-207ENST00000515311 PKHD1P08F94 4074 aa13.5□□□□□ -0.25
LSM6-207ENST00000515311 TLX1NBP0CAT3 122 aa13.5□□□□□ -0.25
LSM6-207ENST00000515311 LOC107984640A0A0U1RRK4 108 aa13.49□□□□□ -0.25
LSM6-207ENST00000515311 C9orf116Q5BN46 136 aaPredicted RBP13.48□□□□□ -0.25
LSM6-207ENST00000515311 LOC105371267A0A1B0GV96 52 aa13.47□□□□□ -0.25
LSM6-207ENST00000515311 NDUFC2-KCTD14E9PQ53 114 aa13.47□□□□□ -0.25
LSM6-207ENST00000515311 COX17Q14061 63 aa13.47□□□□□ -0.25
LSM6-207ENST00000515311 VAMP8Q9BV40 100 aa13.47□□□□□ -0.25
LSM6-207ENST00000515311 DNAH5Q8TE73 4624 aa13.47□□□□□ -0.25
LSM6-207ENST00000515311 KRTAP10-1P60331 282 aa13.46□□□□□ -0.25
LSM6-207ENST00000515311 ERG28Q9UKR5 140 aa13.46□□□□□ -0.25
LSM6-207ENST00000515311 LINC00587B1AMM8 73 aa13.45□□□□□ -0.26
LSM6-207ENST00000515311 ZNF815PA8K554 130 aa13.44□□□□□ -0.26
LSM6-207ENST00000515311 RPL18AQ02543 176 aaKnown RBP13.43□□□□□ -0.26
LSM6-207ENST00000515311 Q6ZRP5 223 aa13.43□□□□□ -0.26
LSM6-207ENST00000515311 TTTY13Q9BZ97 58 aa13.43□□□□□ -0.26
LSM6-207ENST00000515311 LINC00474Q9P2X8 69 aa13.43□□□□□ -0.26
LSM6-207ENST00000515311 A0A096LNI7 61 aa13.42□□□□□ -0.26
LSM6-207ENST00000515311 PTTG1IPP53801 180 aa13.42□□□□□ -0.26
LSM6-207ENST00000515311 Q6ZSA8 131 aa13.42□□□□□ -0.26
LSM6-207ENST00000515311 PCP2Q8IVA1 136 aa13.42□□□□□ -0.26
LSM6-207ENST00000515311 PAM16Q9Y3D7 125 aa13.42□□□□□ -0.26
LSM6-207ENST00000515311 A0A0J9YXY3 114 aa13.41□□□□□ -0.26
LSM6-207ENST00000515311 PFN2P35080 140 aa13.41□□□□□ -0.26
LSM6-207ENST00000515311 SPATA45Q537H7 98 aa13.41□□□□□ -0.26
LSM6-207ENST00000515311 MEIG1Q5JSS6 88 aa13.41□□□□□ -0.26
LSM6-207ENST00000515311 SMIM6P0DI80 62 aa13.4□□□□□ -0.26
LSM6-207ENST00000515311 GAGE2BQ13066 116 aa13.4□□□□□ -0.26
LSM6-207ENST00000515311 CIRBPQ14011 172 aaKnown RBP13.4□□□□□ -0.26
LSM6-207ENST00000515311 SPACA4Q8TDM5 124 aa13.39□□□□□ -0.27
LSM6-207ENST00000515311 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.39□□□□□ -0.27
LSM6-207ENST00000515311 IGKV2-24A0A0C4DH68 120 aa13.38□□□□□ -0.27
LSM6-207ENST00000515311 CHTF8P0CG12 524 aa13.38□□□□□ -0.27
LSM6-207ENST00000515311 SMIM13P0DJ93 91 aa13.38□□□□□ -0.27
LSM6-207ENST00000515311 LINC00158P58513 81 aa13.38□□□□□ -0.27
LSM6-207ENST00000515311 TIMM17BO60830 172 aa13.37□□□□□ -0.27
LSM6-207ENST00000515311 COX8AP10176 69 aa13.37□□□□□ -0.27
LSM6-207ENST00000515311 GAGE2EQ4V326 116 aa13.37□□□□□ -0.27
LSM6-207ENST00000515311 GAGE2DQ9UEU5 116 aa13.37□□□□□ -0.27
LSM6-207ENST00000515311 PANO1I0J062 215 aa13.36□□□□□ -0.27
LSM6-207ENST00000515311 S100A12P80511 92 aa13.36□□□□□ -0.27
LSM6-207ENST00000515311 FAM30AQ9NZY2 134 aa13.36□□□□□ -0.27
LSM6-207ENST00000515311 DYNC1H1Q14204 4646 aaKnown RBP13.36□□□□□ -0.27
LSM6-207ENST00000515311 EPPK1P58107 5090 aaKnown RBP13.36□□□□□ -0.27
LSM6-207ENST00000515311 SCGB1D4Q6XE38 83 aa13.35□□□□□ -0.27
LSM6-207ENST00000515311 BOD1L2Q8IYS8 172 aa13.35□□□□□ -0.27
LSM6-207ENST00000515311 A0A0U1RRA0 63 aa13.34□□□□□ -0.27
LSM6-207ENST00000515311 DLEU1O43261 78 aa13.34□□□□□ -0.27
LSM6-207ENST00000515311 SND1-IT1Q9HBX3 110 aa13.34□□□□□ -0.27
LSM6-207ENST00000515311 C9orf129Q5T035 196 aaKnown RBP13.33□□□□□ -0.28
LSM6-207ENST00000515311 MIR7-3HGQ8N6C7 128 aa13.33□□□□□ -0.28
LSM6-207ENST00000515311 LITAFQ99732 161 aa13.33□□□□□ -0.28
LSM6-207ENST00000515311 XAGE1AQ9HD64 81 aa13.33□□□□□ -0.28
LSM6-207ENST00000515311 LRP1BQ9NZR2 4599 aa13.33□□□□□ -0.28
LSM6-207ENST00000515311 C14orf144Q96I85 54 aa13.31□□□□□ -0.28
LSM6-207ENST00000515311 TMEM238C9JI98 176 aa13.3□□□□□ -0.28
LSM6-207ENST00000515311 ADAMTSL4-AS1Q5T5F5 129 aa13.3□□□□□ -0.28
LSM6-207ENST00000515311 DPH3Q96FX2 82 aa13.3□□□□□ -0.28
LSM6-207ENST00000515311 A0A087WYN8 130 aa13.29□□□□□ -0.28
LSM6-207ENST00000515311 SLC25A34Q6PIV7 304 aa13.29□□□□□ -0.28
LSM6-207ENST00000515311 DAND5Q8N907 189 aa13.29□□□□□ -0.28
LSM6-207ENST00000515311 PLAC8Q9NZF1 115 aa13.29□□□□□ -0.28
LSM6-207ENST00000515311 EPM2AB3EWF7 344 aa13.28□□□□□ -0.28
LSM6-207ENST00000515311 CDK2AP2O75956 126 aa13.28□□□□□ -0.28
LSM6-207ENST00000515311 SCXQ7RTU7 201 aa13.28□□□□□ -0.28
LSM6-207ENST00000515311 PLA2G2DQ9UNK4 145 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 181.5 ms