RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 SETD2Q9BYW2 2564 aaPredicted RBP4.18□□□□□ -1.74
NPHP3-211ENST00000515289 NF1P21359 2839 aa4.17□□□□□ -1.74
NPHP3-211ENST00000515289 F8P00451 2351 aa4.17□□□□□ -1.74
NPHP3-211ENST00000515289 TRBV27A0A0K0K1C4 114 aa4.17□□□□□ -1.74
NPHP3-211ENST00000515289 A8MUN3 132 aa4.17□□□□□ -1.74
NPHP3-211ENST00000515289 C12orf74Q32Q52 190 aa4.17□□□□□ -1.74
NPHP3-211ENST00000515289 FAM74A4Q5TZK3 123 aa4.17□□□□□ -1.74
NPHP3-211ENST00000515289 ZNF705AQ6ZN79 300 aaPredicted RBP4.17□□□□□ -1.74
NPHP3-211ENST00000515289 TOMM6Q96B49 74 aa4.17□□□□□ -1.74
NPHP3-211ENST00000515289 ST20Q9HBF5 79 aa4.17□□□□□ -1.74
NPHP3-211ENST00000515289 MRPL16Q9NX20 251 aaKnown RBP4.17□□□□□ -1.74
NPHP3-211ENST00000515289 CELA1Q9UNI1 258 aa4.17□□□□□ -1.74
NPHP3-211ENST00000515289 ICOSQ9Y6W8 199 aa4.17□□□□□ -1.74
NPHP3-211ENST00000515289 A6NED7 52 aa4.16□□□□□ -1.74
NPHP3-211ENST00000515289 SDHAF1A6NFY7 115 aa4.16□□□□□ -1.74
NPHP3-211ENST00000515289 A8MUU9 505 aa4.16□□□□□ -1.74
NPHP3-211ENST00000515289 A8MWV9 139 aa4.16□□□□□ -1.74
NPHP3-211ENST00000515289 HTN1P15515 57 aa4.16□□□□□ -1.74
NPHP3-211ENST00000515289 INSL3P51460 131 aa4.16□□□□□ -1.74
NPHP3-211ENST00000515289 ZNF56Q15929 161 aa4.16□□□□□ -1.74
NPHP3-211ENST00000515289 CFAP126Q5VTH2 177 aa4.16□□□□□ -1.74
NPHP3-211ENST00000515289 UBE2WQ96B02 151 aa4.16□□□□□ -1.74
NPHP3-211ENST00000515289 UQCR10Q9UDW1 63 aa4.16□□□□□ -1.74
NPHP3-211ENST00000515289 TP73-AS1Q9UF72 201 aa4.16□□□□□ -1.74
NPHP3-211ENST00000515289 KLK5Q9Y337 293 aaPredicted RBP4.16□□□□□ -1.74
NPHP3-211ENST00000515289 IGHV3-73A0A0B4J1V6 119 aa4.15□□□□□ -1.75
NPHP3-211ENST00000515289 TRAV12-1A0A0B4J245 112 aa4.15□□□□□ -1.75
NPHP3-211ENST00000515289 A0A1B0GW54 56 aa4.15□□□□□ -1.75
NPHP3-211ENST00000515289 IGLV7-43P04211 117 aa4.15□□□□□ -1.75
NPHP3-211ENST00000515289 P0DMU3 169 aa4.15□□□□□ -1.75
NPHP3-211ENST00000515289 FAM231AP0DMU4 169 aa4.15□□□□□ -1.75
NPHP3-211ENST00000515289 FAM231CP0DMU5 169 aa4.15□□□□□ -1.75
NPHP3-211ENST00000515289 IGHV3-30-3P0DP02 117 aa4.15□□□□□ -1.75
NPHP3-211ENST00000515289 RHOHQ15669 191 aa4.15□□□□□ -1.75
NPHP3-211ENST00000515289 WFDC9Q8NEX5 89 aa4.15□□□□□ -1.75
NPHP3-211ENST00000515289 TMEM263Q8WUH6 116 aaKnown RBP4.15□□□□□ -1.75
NPHP3-211ENST00000515289 SNHG12Q9BXW3 62 aa4.15□□□□□ -1.75
NPHP3-211ENST00000515289 A0A087WX48 190 aa4.14□□□□□ -1.75
NPHP3-211ENST00000515289 IGIPA6NJ69 53 aa4.14□□□□□ -1.75
NPHP3-211ENST00000515289 IGHV3-53P01767 116 aa4.14□□□□□ -1.75
NPHP3-211ENST00000515289 KRTAP1-4P0C5Y4 121 aa4.14□□□□□ -1.75
NPHP3-211ENST00000515289 SLC25A34Q6PIV7 304 aa4.14□□□□□ -1.75
NPHP3-211ENST00000515289 Q6ZTI0 123 aa4.14□□□□□ -1.75
NPHP3-211ENST00000515289 SCGB3A1Q96QR1 104 aa4.14□□□□□ -1.75
NPHP3-211ENST00000515289 C2orf88Q9BSF0 95 aa4.14□□□□□ -1.75
NPHP3-211ENST00000515289 MRPL35Q9NZE8 188 aaKnown RBP4.14□□□□□ -1.75
NPHP3-211ENST00000515289 CYSLTR1Q9Y271 337 aa4.14□□□□□ -1.75
NPHP3-211ENST00000515289 JMJD1CQ15652 2540 aa4.13□□□□□ -1.75
NPHP3-211ENST00000515289 TRGV1A0A0A0MS02 117 aa4.13□□□□□ -1.75
NPHP3-211ENST00000515289 TRAV4A0A0B4J268 109 aa4.13□□□□□ -1.75
NPHP3-211ENST00000515289 LECT2O14960 151 aa4.13□□□□□ -1.75
NPHP3-211ENST00000515289 SLC25A20O43772 301 aa4.13□□□□□ -1.75
NPHP3-211ENST00000515289 DPM2O94777 84 aa4.13□□□□□ -1.75
NPHP3-211ENST00000515289 COX8AP10176 69 aa4.13□□□□□ -1.75
NPHP3-211ENST00000515289 RPL39P62891 51 aaKnown RBP4.13□□□□□ -1.75
NPHP3-211ENST00000515289 LINC00483Q53H64 154 aa4.13□□□□□ -1.75
NPHP3-211ENST00000515289 C2orf91Q6ZV80 131 aa4.13□□□□□ -1.75
NPHP3-211ENST00000515289 DEFB104AQ8WTQ1 72 aa4.13□□□□□ -1.75
NPHP3-211ENST00000515289 SS18L2Q9UHA2 77 aa4.13□□□□□ -1.75
NPHP3-211ENST00000515289 HHLA3Q9XRX5 114 aa4.13□□□□□ -1.75
NPHP3-211ENST00000515289 NACAE9PAV3 2078 aa4.13□□□□□ -1.75
NPHP3-211ENST00000515289 FLNBO75369 2602 aaKnown RBP4.13□□□□□ -1.75
NPHP3-211ENST00000515289 IGKV2D-26A0A0A0MRZ7 120 aa4.12□□□□□ -1.75
NPHP3-211ENST00000515289 LINC01549A6NIU2 74 aa4.12□□□□□ -1.75
NPHP3-211ENST00000515289 F8VRH5 84 aa4.12□□□□□ -1.75
NPHP3-211ENST00000515289 I3L3M4 83 aa4.12□□□□□ -1.75
NPHP3-211ENST00000515289 M0R143 59 aa4.12□□□□□ -1.75
NPHP3-211ENST00000515289 IGKCP01834 107 aa4.12□□□□□ -1.75
NPHP3-211ENST00000515289 INAFM2P0DMQ5 153 aa4.12□□□□□ -1.75
NPHP3-211ENST00000515289 TSPEAR-AS2P59090 65 aa4.12□□□□□ -1.75
NPHP3-211ENST00000515289 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
NPHP3-211ENST00000515289 TMEM141Q96I45 108 aa4.12□□□□□ -1.75
NPHP3-211ENST00000515289 DNAJC30Q96LL9 226 aa4.12□□□□□ -1.75
NPHP3-211ENST00000515289 KRTAP9-8Q9BYQ0 159 aa4.12□□□□□ -1.75
NPHP3-211ENST00000515289 NOP10Q9NPE3 64 aaKnown RBP4.12□□□□□ -1.75
NPHP3-211ENST00000515289 ANAPC11Q9NYG5 84 aa4.12□□□□□ -1.75
NPHP3-211ENST00000515289 C16orf90A8MZG2 172 aa4.11□□□□□ -1.75
NPHP3-211ENST00000515289 DLEU1O43261 78 aa4.11□□□□□ -1.75
NPHP3-211ENST00000515289 RRN3P1Q2M238 152 aa4.11□□□□□ -1.75
NPHP3-211ENST00000515289 A0A0B4J2C4 111 aa4.1□□□□□ -1.75
NPHP3-211ENST00000515289 TRBV10-1A0A0K0K1A3 114 aa4.1□□□□□ -1.75
NPHP3-211ENST00000515289 C11orf86A6NJI1 115 aa4.1□□□□□ -1.75
NPHP3-211ENST00000515289 H3BQ85 93 aa4.1□□□□□ -1.75
NPHP3-211ENST00000515289 LINC00694P0DN24 101 aa4.1□□□□□ -1.75
NPHP3-211ENST00000515289 PLNP26678 52 aa4.1□□□□□ -1.75
NPHP3-211ENST00000515289 DAND5Q8N907 189 aa4.1□□□□□ -1.75
NPHP3-211ENST00000515289 UPK3BQ9BT76 320 aa4.1□□□□□ -1.75
NPHP3-211ENST00000515289 CST9LQ9H4G1 147 aa4.1□□□□□ -1.75
NPHP3-211ENST00000515289 NOTCH3Q9UM47 2321 aa4.1□□□□□ -1.75
NPHP3-211ENST00000515289 A0A1B0GV90 55 aa4.09□□□□□ -1.75
NPHP3-211ENST00000515289 UBE2D3P61077 147 aa4.09□□□□□ -1.75
NPHP3-211ENST00000515289 UBE2D2P62837 147 aa4.09□□□□□ -1.75
NPHP3-211ENST00000515289 SBSPONQ8IVN8 264 aa4.09□□□□□ -1.75
NPHP3-211ENST00000515289 Q8N9L7 120 aa4.09□□□□□ -1.75
NPHP3-211ENST00000515289 AMELXQ99217 191 aa4.09□□□□□ -1.75
NPHP3-211ENST00000515289 TTTY13Q9BZ97 58 aa4.09□□□□□ -1.75
NPHP3-211ENST00000515289 UBE2D4Q9Y2X8 147 aa4.09□□□□□ -1.75
NPHP3-211ENST00000515289 TENM1Q9UKZ4 2725 aa4.08□□□□□ -1.76
NPHP3-211ENST00000515289 TRBV7-3A0A075B6L6 115 aa4.08□□□□□ -1.76
NPHP3-211ENST00000515289 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms