RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ALKBH7Q9BT30 221 aaPredicted RBP6.38□□□□□ -1.39
HMGXB3-205ENST00000514469 GNB1LQ9BYB4 327 aa6.38□□□□□ -1.39
HMGXB3-205ENST00000514469 CDKN2A-AS1Q9UH64 79 aa6.38□□□□□ -1.39
HMGXB3-205ENST00000514469 CKS1BP61024 79 aa6.37□□□□□ -1.39
HMGXB3-205ENST00000514469 ERASQ7Z444 233 aa6.37□□□□□ -1.39
HMGXB3-205ENST00000514469 COMMD7Q86VX2 200 aa6.37□□□□□ -1.39
HMGXB3-205ENST00000514469 TOMM7Q9P0U1 55 aa6.37□□□□□ -1.39
HMGXB3-205ENST00000514469 LINC01549A6NIU2 74 aa6.36□□□□□ -1.39
HMGXB3-205ENST00000514469 COX19Q49B96 90 aa6.36□□□□□ -1.39
HMGXB3-205ENST00000514469 C6orf226Q5I0X4 101 aa6.36□□□□□ -1.39
HMGXB3-205ENST00000514469 C10orf91Q5T1B1 145 aa6.36□□□□□ -1.39
HMGXB3-205ENST00000514469 SCGB3A1Q96QR1 104 aa6.36□□□□□ -1.39
HMGXB3-205ENST00000514469 GEMIN7Q9H840 131 aaKnown RBP6.36□□□□□ -1.39
HMGXB3-205ENST00000514469 IGLV5-45A0A087WSX0 123 aa6.35□□□□□ -1.39
HMGXB3-205ENST00000514469 TINCRA0A1B0GVN0 87 aa6.35□□□□□ -1.39
HMGXB3-205ENST00000514469 SMIM1B2RUZ4 78 aa6.35□□□□□ -1.39
HMGXB3-205ENST00000514469 F8VRH5 84 aa6.35□□□□□ -1.39
HMGXB3-205ENST00000514469 H0Y9J4 135 aa6.35□□□□□ -1.39
HMGXB3-205ENST00000514469 CXCL5P42830 114 aa6.35□□□□□ -1.39
HMGXB3-205ENST00000514469 RHEBQ15382 184 aa6.35□□□□□ -1.39
HMGXB3-205ENST00000514469 DIRC1Q969H9 104 aa6.35□□□□□ -1.39
HMGXB3-205ENST00000514469 CARHSP1Q9Y2V2 147 aaKnown RBP6.35□□□□□ -1.39
HMGXB3-205ENST00000514469 UBE2BP63146 152 aa6.34□□□□□ -1.39
HMGXB3-205ENST00000514469 LINC00469Q8N7U9 141 aa6.34□□□□□ -1.39
HMGXB3-205ENST00000514469 MRPL18Q9H0U6 180 aaKnown RBP6.34□□□□□ -1.39
HMGXB3-205ENST00000514469 PDZD11Q5EBL8 140 aa6.33□□□□□ -1.4
HMGXB3-205ENST00000514469 FA2HQ7L5A8 372 aa6.33□□□□□ -1.4
HMGXB3-205ENST00000514469 CST9LQ9H4G1 147 aa6.33□□□□□ -1.4
HMGXB3-205ENST00000514469 FABP9Q0Z7S8 132 aa6.32□□□□□ -1.4
HMGXB3-205ENST00000514469 COX7B2Q8TF08 81 aa6.32□□□□□ -1.4
HMGXB3-205ENST00000514469 XAGE1AQ9HD64 81 aa6.32□□□□□ -1.4
HMGXB3-205ENST00000514469 RPS10P5Q9NQ39 176 aa6.32□□□□□ -1.4
HMGXB3-205ENST00000514469 A0A096LNJ9 63 aa6.31□□□□□ -1.4
HMGXB3-205ENST00000514469 KRTAP1-4P0C5Y4 121 aa6.31□□□□□ -1.4
HMGXB3-205ENST00000514469 PMVKQ15126 192 aa6.31□□□□□ -1.4
HMGXB3-205ENST00000514469 SMCO4Q9NRQ5 59 aa6.31□□□□□ -1.4
HMGXB3-205ENST00000514469 TP73-AS1Q9UF72 201 aa6.31□□□□□ -1.4
HMGXB3-205ENST00000514469 C22orf24Q9Y442 160 aa6.31□□□□□ -1.4
HMGXB3-205ENST00000514469 RNF213Q63HN8 5207 aa6.3□□□□□ -1.4
HMGXB3-205ENST00000514469 NUPR1O60356 82 aa6.3□□□□□ -1.4
HMGXB3-205ENST00000514469 SPINK8P0C7L1 97 aa6.3□□□□□ -1.4
HMGXB3-205ENST00000514469 PRR26Q8N8Z3 221 aa6.3□□□□□ -1.4
HMGXB3-205ENST00000514469 IGLV1-50A0A075B6I6 118 aa6.29□□□□□ -1.4
HMGXB3-205ENST00000514469 IGLC3P0DOY3 106 aa6.29□□□□□ -1.4
HMGXB3-205ENST00000514469 LBHQ53QV2 105 aaPredicted RBP6.29□□□□□ -1.4
HMGXB3-205ENST00000514469 C18orf32Q8TCD1 76 aa6.29□□□□□ -1.4
HMGXB3-205ENST00000514469 URB1-AS1Q96HZ7 61 aa6.29□□□□□ -1.4
HMGXB3-205ENST00000514469 IGLV5-39A0A0G2JS06 123 aa6.28□□□□□ -1.4
HMGXB3-205ENST00000514469 H3BRM9 83 aa6.28□□□□□ -1.4
HMGXB3-205ENST00000514469 ZNF861PO60384 105 aa6.28□□□□□ -1.4
HMGXB3-205ENST00000514469 MRPL55Q7Z7F7 128 aaKnown RBP6.28□□□□□ -1.4
HMGXB3-205ENST00000514469 TRAPPC1Q9Y5R8 145 aa6.28□□□□□ -1.4
HMGXB3-205ENST00000514469 IGLV5-37A0A075B6J1 123 aa6.27□□□□□ -1.41
HMGXB3-205ENST00000514469 HBDP02042 147 aa6.27□□□□□ -1.41
HMGXB3-205ENST00000514469 LINC00614P0C842 121 aa6.26□□□□□ -1.41
HMGXB3-205ENST00000514469 ZNF22P17026 224 aaPredicted RBP6.26□□□□□ -1.41
HMGXB3-205ENST00000514469 BCE1O60756 84 aa6.25□□□□□ -1.41
HMGXB3-205ENST00000514469 ATP5LO75964 103 aa6.25□□□□□ -1.41
HMGXB3-205ENST00000514469 SNAPINO95295 136 aa6.25□□□□□ -1.41
HMGXB3-205ENST00000514469 APOC3P02656 99 aa6.25□□□□□ -1.41
HMGXB3-205ENST00000514469 RPL13AP40429 203 aaKnown RBP6.25□□□□□ -1.41
HMGXB3-205ENST00000514469 PMCHL1Q16048 86 aa6.25□□□□□ -1.41
HMGXB3-205ENST00000514469 SVBPQ8N300 66 aa6.25□□□□□ -1.41
HMGXB3-205ENST00000514469 LINC00167Q96N53 147 aa6.25□□□□□ -1.41
HMGXB3-205ENST00000514469 LPAP08519 4548 aa6.25□□□□□ -1.41
HMGXB3-205ENST00000514469 NDUFA6P56556 154 aa6.24□□□□□ -1.41
HMGXB3-205ENST00000514469 RAB5BP61020 215 aa6.24□□□□□ -1.41
HMGXB3-205ENST00000514469 RPL28P46779 137 aaKnown RBP6.23□□□□□ -1.41
HMGXB3-205ENST00000514469 NDUFA5Q16718 116 aa6.23□□□□□ -1.41
HMGXB3-205ENST00000514469 YPEL4Q96NS1 127 aa6.23□□□□□ -1.41
HMGXB3-205ENST00000514469 GAGE10A6NGK3 116 aa6.22□□□□□ -1.41
HMGXB3-205ENST00000514469 C11orf86A6NJI1 115 aa6.22□□□□□ -1.41
HMGXB3-205ENST00000514469 RPL37AP8A6NKH3 93 aa6.22□□□□□ -1.41
HMGXB3-205ENST00000514469 NKAPP1Q8N9T2 125 aa6.22□□□□□ -1.41
HMGXB3-205ENST00000514469 PFN2P35080 140 aa6.21□□□□□ -1.42
HMGXB3-205ENST00000514469 COX17Q14061 63 aa6.21□□□□□ -1.42
HMGXB3-205ENST00000514469 SFTA2Q6UW10 78 aa6.21□□□□□ -1.42
HMGXB3-205ENST00000514469 BAGE3Q86Y29 109 aa6.21□□□□□ -1.42
HMGXB3-205ENST00000514469 KRTAP13-1Q8IUC0 172 aa6.21□□□□□ -1.42
HMGXB3-205ENST00000514469 ERG28Q9UKR5 140 aa6.21□□□□□ -1.42
HMGXB3-205ENST00000514469 SCO1O75880 301 aa6.2□□□□□ -1.42
HMGXB3-205ENST00000514469 VPREB1P12018 145 aa6.2□□□□□ -1.42
HMGXB3-205ENST00000514469 TMEM170BQ5T4T1 132 aa6.2□□□□□ -1.42
HMGXB3-205ENST00000514469 CHCHD1Q96BP2 118 aaKnown RBP6.2□□□□□ -1.42
HMGXB3-205ENST00000514469 ZNF625Q96I27 306 aaPredicted RBP6.2□□□□□ -1.42
HMGXB3-205ENST00000514469 SND1-IT1Q9HBX3 110 aa6.2□□□□□ -1.42
HMGXB3-205ENST00000514469 IGKV2-28A0A075B6P5 120 aa6.19□□□□□ -1.42
HMGXB3-205ENST00000514469 A0A087X002 238 aa6.19□□□□□ -1.42
HMGXB3-205ENST00000514469 TRAV12-1A0A0B4J245 112 aa6.19□□□□□ -1.42
HMGXB3-205ENST00000514469 IGKV2D-28P01615 120 aa6.19□□□□□ -1.42
HMGXB3-205ENST00000514469 CHTOPQ9Y3Y2 248 aaKnown RBP6.19□□□□□ -1.42
HMGXB3-205ENST00000514469 UBE2AP49459 152 aa6.18□□□□□ -1.42
HMGXB3-205ENST00000514469 Q8NDZ9 215 aa6.18□□□□□ -1.42
HMGXB3-205ENST00000514469 TMEM223A0PJW6 202 aa6.17□□□□□ -1.42
HMGXB3-205ENST00000514469 RPL24P83731 157 aaKnown RBP6.17□□□□□ -1.42
HMGXB3-205ENST00000514469 IFI27L1Q96BM0 104 aa6.17□□□□□ -1.42
HMGXB3-205ENST00000514469 TMEM126AQ9H061 195 aa6.17□□□□□ -1.42
HMGXB3-205ENST00000514469 CRYGAP11844 174 aa6.16□□□□□ -1.42
HMGXB3-205ENST00000514469 CBLN2Q8IUK8 224 aa6.16□□□□□ -1.42
HMGXB3-205ENST00000514469 TMEM238C9JI98 176 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms