RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 HIGD2BQ4VC39 106 aa3.83□□□□□ -1.8
TRAPPC11-209ENST00000512476 LEAP2Q969E1 77 aa3.83□□□□□ -1.8
TRAPPC11-209ENST00000512476 NBASA2RRP1 2371 aa3.83□□□□□ -1.8
TRAPPC11-209ENST00000512476 IGLV1-47P01700 117 aa3.83□□□□□ -1.8
TRAPPC11-209ENST00000512476 LIMD2Q9BT23 127 aa3.83□□□□□ -1.8
TRAPPC11-209ENST00000512476 CYP4F30PQ9H0H9 118 aa3.83□□□□□ -1.8
TRAPPC11-209ENST00000512476 ANKHD1Q8IWZ3 2542 aaKnown RBP3.83□□□□□ -1.8
TRAPPC11-209ENST00000512476 IGSF10Q6WRI0 2623 aa3.83□□□□□ -1.8
TRAPPC11-209ENST00000512476 TRBV7-1A0A0A6YYK4 115 aa3.82□□□□□ -1.8
TRAPPC11-209ENST00000512476 PIGBOS1A0A0B4J2F0 54 aa3.82□□□□□ -1.8
TRAPPC11-209ENST00000512476 RPL39P5Q59GN2 51 aa3.82□□□□□ -1.8
TRAPPC11-209ENST00000512476 KPRPQ5T749 579 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC11-209ENST00000512476 TIMM21Q9BVV7 248 aa3.82□□□□□ -1.8
TRAPPC11-209ENST00000512476 PKDREJQ9NTG1 2253 aa3.82□□□□□ -1.8
TRAPPC11-209ENST00000512476 TRBV7-3A0A075B6L6 115 aa3.82□□□□□ -1.8
TRAPPC11-209ENST00000512476 KALRNO60229 2985 aa3.82□□□□□ -1.8
TRAPPC11-209ENST00000512476 IGKV2-30P06310 120 aa3.82□□□□□ -1.8
TRAPPC11-209ENST00000512476 SAA2P0DJI9 122 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC11-209ENST00000512476 KRTAP10-2P60368 255 aa3.82□□□□□ -1.8
TRAPPC11-209ENST00000512476 TMEM254Q8TBM7 123 aa3.82□□□□□ -1.8
TRAPPC11-209ENST00000512476 ROS1P08922 2347 aa3.82□□□□□ -1.8
TRAPPC11-209ENST00000512476 BAALC-AS2P0C853 105 aa3.81□□□□□ -1.8
TRAPPC11-209ENST00000512476 KRTAP26-1Q6PEX3 210 aa3.81□□□□□ -1.8
TRAPPC11-209ENST00000512476 ST20-AS1Q8NBB2 130 aa3.81□□□□□ -1.8
TRAPPC11-209ENST00000512476 TP53TG3Q9ULZ0 132 aa3.81□□□□□ -1.8
TRAPPC11-209ENST00000512476 CR1P17927 2039 aa3.81□□□□□ -1.8
TRAPPC11-209ENST00000512476 A0A087WSZ3 146 aa3.81□□□□□ -1.8
TRAPPC11-209ENST00000512476 ERC2-IT1O76042 136 aa3.81□□□□□ -1.8
TRAPPC11-209ENST00000512476 COX8AP10176 69 aa3.81□□□□□ -1.8
TRAPPC11-209ENST00000512476 CCL19Q99731 98 aa3.81□□□□□ -1.8
TRAPPC11-209ENST00000512476 A0A0J9YWU9 116 aa3.8□□□□□ -1.8
TRAPPC11-209ENST00000512476 A0A1W2PNM2 257 aa3.8□□□□□ -1.8
TRAPPC11-209ENST00000512476 C2orf70A6NJV1 201 aa3.8□□□□□ -1.8
TRAPPC11-209ENST00000512476 MIFP14174 115 aa3.8□□□□□ -1.8
TRAPPC11-209ENST00000512476 COX6B1P14854 86 aa3.8□□□□□ -1.8
TRAPPC11-209ENST00000512476 TMEM170BQ5T4T1 132 aa3.8□□□□□ -1.8
TRAPPC11-209ENST00000512476 ZNF833PQ6ZTB9 187 aa3.8□□□□□ -1.8
TRAPPC11-209ENST00000512476 SMG1Q96Q15 3661 aaKnown RBP3.8□□□□□ -1.8
TRAPPC11-209ENST00000512476 ZNF137PP52743 207 aa3.8□□□□□ -1.8
TRAPPC11-209ENST00000512476 CFAP46Q8IYW2 2715 aa3.8□□□□□ -1.8
TRAPPC11-209ENST00000512476 UBE2D1P51668 147 aa3.79□□□□□ -1.8
TRAPPC11-209ENST00000512476 KRTAP7-1Q8IUC3 87 aa3.79□□□□□ -1.8
TRAPPC11-209ENST00000512476 HRNRQ86YZ3 2850 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC11-209ENST00000512476 M0R1W7 72 aa3.79□□□□□ -1.8
TRAPPC11-209ENST00000512476 PRB3Q04118 309 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC11-209ENST00000512476 FAM167A-AS1Q96KT0 104 aa3.79□□□□□ -1.8
TRAPPC11-209ENST00000512476 FAM103A1Q9BTL3 118 aaKnown RBP3.79□□□□□ -1.8
TRAPPC11-209ENST00000512476 IGHV3-64A0A075B6Q5 118 aa3.78□□□□□ -1.8
TRAPPC11-209ENST00000512476 IGHV3OR16-8A0A075B7F1 116 aa3.78□□□□□ -1.8
TRAPPC11-209ENST00000512476 ACYP1P07311 99 aa3.78□□□□□ -1.8
TRAPPC11-209ENST00000512476 SPTBN1Q01082 2364 aaKnown RBP3.78□□□□□ -1.8
TRAPPC11-209ENST00000512476 TRBV25-1A0A075B6N4 114 aa3.78□□□□□ -1.8
TRAPPC11-209ENST00000512476 J3QKU1 62 aa3.78□□□□□ -1.8
TRAPPC11-209ENST00000512476 RTL8CO15255 209 aa3.78□□□□□ -1.8
TRAPPC11-209ENST00000512476 IAPPP10997 89 aa3.78□□□□□ -1.8
TRAPPC11-209ENST00000512476 DOPEY1Q5JWR5 2465 aa3.78□□□□□ -1.8
TRAPPC11-209ENST00000512476 HCP5Q6MZN7 132 aa3.78□□□□□ -1.8
TRAPPC11-209ENST00000512476 TVP23CQ96ET8 276 aa3.77□□□□□ -1.81
TRAPPC11-209ENST00000512476 TMEM14BQ9NUH8 114 aa3.77□□□□□ -1.81
TRAPPC11-209ENST00000512476 R4GN34 69 aa3.77□□□□□ -1.81
TRAPPC11-209ENST00000512476 ARL2-SNX15V9GYD0 113 aa3.77□□□□□ -1.81
TRAPPC11-209ENST00000512476 GCHFRP30047 84 aa3.77□□□□□ -1.81
TRAPPC11-209ENST00000512476 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC11-209ENST00000512476 ZNF462Q96JM2 2506 aa3.77□□□□□ -1.81
TRAPPC11-209ENST00000512476 CEBPZOSA8MTT3 80 aa3.76□□□□□ -1.81
TRAPPC11-209ENST00000512476 KRTAP10-9P60411 292 aa3.76□□□□□ -1.81
TRAPPC11-209ENST00000512476 NDPQ00604 133 aa3.76□□□□□ -1.81
TRAPPC11-209ENST00000512476 SPINK9Q5DT21 86 aa3.76□□□□□ -1.81
TRAPPC11-209ENST00000512476 SPANXN5Q5MJ07 72 aa3.76□□□□□ -1.81
TRAPPC11-209ENST00000512476 Q8N3U1 123 aa3.76□□□□□ -1.81
TRAPPC11-209ENST00000512476 CDC42SE2Q9NRR3 84 aa3.76□□□□□ -1.81
TRAPPC11-209ENST00000512476 ZFYVE26Q68DK2 2539 aa3.76□□□□□ -1.81
TRAPPC11-209ENST00000512476 KMT2BQ9UMN6 2715 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC11-209ENST00000512476 USF3Q68DE3 2245 aa3.76□□□□□ -1.81
TRAPPC11-209ENST00000512476 ERHP84090 104 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-209ENST00000512476 UBR5O95071 2799 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC11-209ENST00000512476 LRBAP50851 2863 aa3.75□□□□□ -1.81
TRAPPC11-209ENST00000512476 EPG5Q9HCE0 2579 aa3.75□□□□□ -1.81
TRAPPC11-209ENST00000512476 H3BVH4 76 aa3.75□□□□□ -1.81
TRAPPC11-209ENST00000512476 TMEM167AQ8TBQ9 72 aa3.75□□□□□ -1.81
TRAPPC11-209ENST00000512476 USP9XQ93008 2570 aaPredicted RBP3.75□□□□□ -1.81
TRAPPC11-209ENST00000512476 ANKRD17O75179 2603 aaKnown RBP3.75□□□□□ -1.81
TRAPPC11-209ENST00000512476 TRAV12-1A0A0B4J245 112 aa3.75□□□□□ -1.81
TRAPPC11-209ENST00000512476 MINOS1Q5TGZ0 78 aa3.75□□□□□ -1.81
TRAPPC11-209ENST00000512476 DCHS2Q6V1P9 2916 aa3.75□□□□□ -1.81
TRAPPC11-209ENST00000512476 A0A096LNT2 108 aa3.74□□□□□ -1.81
TRAPPC11-209ENST00000512476 PRCDQ00LT1 54 aa3.74□□□□□ -1.81
TRAPPC11-209ENST00000512476 MRGPRG-AS1Q2M3A8 158 aa3.74□□□□□ -1.81
TRAPPC11-209ENST00000512476 NDUFA4L2Q9NRX3 87 aa3.74□□□□□ -1.81
TRAPPC11-209ENST00000512476 MYMXA0A1B0GTQ4 84 aa3.74□□□□□ -1.81
TRAPPC11-209ENST00000512476 DEFB121Q5J5C9 76 aa3.74□□□□□ -1.81
TRAPPC11-209ENST00000512476 KRTAP29-1A8MX34 341 aaPredicted RBP3.73□□□□□ -1.81
TRAPPC11-209ENST00000512476 SLPIP03973 132 aa3.73□□□□□ -1.81
TRAPPC11-209ENST00000512476 C10orf55Q5SWW7 151 aa3.73□□□□□ -1.81
TRAPPC11-209ENST00000512476 ZNF815PA8K554 130 aa3.73□□□□□ -1.81
TRAPPC11-209ENST00000512476 NDUFA3O95167 84 aa3.73□□□□□ -1.81
TRAPPC11-209ENST00000512476 FLNCQ14315 2725 aa3.73□□□□□ -1.81
TRAPPC11-209ENST00000512476 COL12A1Q99715 3063 aa3.72□□□□□ -1.81
TRAPPC11-209ENST00000512476 ABCA1O95477 2261 aa3.72□□□□□ -1.81
TRAPPC11-209ENST00000512476 MED13LQ71F56 2210 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms