RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 COX7B2Q8TF08 81 aa6.12□□□□□ -1.43
NR1I3-228ENST00000511676 UBE2WQ96B02 151 aa6.12□□□□□ -1.43
NR1I3-228ENST00000511676 ZNF625Q96I27 306 aaPredicted RBP6.12□□□□□ -1.43
NR1I3-228ENST00000511676 TP73-AS1Q9UF72 201 aa6.12□□□□□ -1.43
NR1I3-228ENST00000511676 IGHV3-64A0A075B6Q5 118 aa6.11□□□□□ -1.43
NR1I3-228ENST00000511676 IGKV3OR2-268A0A0C4DH90 116 aa6.11□□□□□ -1.43
NR1I3-228ENST00000511676 MALP21145 153 aa6.11□□□□□ -1.43
NR1I3-228ENST00000511676 CTAG1AP78358 180 aa6.11□□□□□ -1.43
NR1I3-228ENST00000511676 Q8N3U1 123 aa6.11□□□□□ -1.43
NR1I3-228ENST00000511676 MAPKAPK5-AS1Q8N8E1 139 aa6.11□□□□□ -1.43
NR1I3-228ENST00000511676 COPS9Q8WXC6 57 aa6.11□□□□□ -1.43
NR1I3-228ENST00000511676 C1orf43Q9BWL3 253 aa6.11□□□□□ -1.43
NR1I3-228ENST00000511676 Q9H8V8 135 aa6.11□□□□□ -1.43
NR1I3-228ENST00000511676 KMT2AQ03164 3969 aa6.11□□□□□ -1.43
NR1I3-228ENST00000511676 HYDINQ4G0P3 5121 aa6.1□□□□□ -1.43
NR1I3-228ENST00000511676 PRSS2P07478 247 aa6.1□□□□□ -1.43
NR1I3-228ENST00000511676 PTTG1IPP53801 180 aa6.1□□□□□ -1.43
NR1I3-228ENST00000511676 CIRBPQ14011 172 aaKnown RBP6.1□□□□□ -1.43
NR1I3-228ENST00000511676 KRTAP26-1Q6PEX3 210 aa6.1□□□□□ -1.43
NR1I3-228ENST00000511676 CLPSL2Q6UWE3 100 aa6.1□□□□□ -1.43
NR1I3-228ENST00000511676 TM2D2Q9BX73 214 aa6.1□□□□□ -1.43
NR1I3-228ENST00000511676 TTTY13Q9BZ97 58 aa6.1□□□□□ -1.43
NR1I3-228ENST00000511676 PLECQ15149 4684 aaKnown RBP6.1□□□□□ -1.43
NR1I3-228ENST00000511676 GAGE12HA6NDE8 117 aa6.09□□□□□ -1.43
NR1I3-228ENST00000511676 CDK2AP2O75956 126 aa6.09□□□□□ -1.43
NR1I3-228ENST00000511676 IFITM1P13164 125 aa6.09□□□□□ -1.43
NR1I3-228ENST00000511676 CFAP161Q6P656 301 aa6.09□□□□□ -1.43
NR1I3-228ENST00000511676 C5orf38Q86SI9 138 aa6.09□□□□□ -1.43
NR1I3-228ENST00000511676 SPANXDQ9BXN6 97 aa6.09□□□□□ -1.43
NR1I3-228ENST00000511676 KRTAP17-1Q9BYP8 105 aa6.09□□□□□ -1.43
NR1I3-228ENST00000511676 SPANXCQ9NY87 97 aa6.09□□□□□ -1.43
NR1I3-228ENST00000511676 M0R2N4 97 aa6.08□□□□□ -1.44
NR1I3-228ENST00000511676 COX17Q14061 63 aa6.08□□□□□ -1.44
NR1I3-228ENST00000511676 C6orf226Q5I0X4 101 aa6.08□□□□□ -1.44
NR1I3-228ENST00000511676 BVES-AS1Q5T3Y7 98 aa6.08□□□□□ -1.44
NR1I3-228ENST00000511676 HIST1H4GQ99525 98 aa6.08□□□□□ -1.44
NR1I3-228ENST00000511676 SNHG12Q9BXW3 62 aa6.08□□□□□ -1.44
NR1I3-228ENST00000511676 IGLV10-54A0A075B6I4 117 aa6.07□□□□□ -1.44
NR1I3-228ENST00000511676 GVQW2A0A096LPI5 108 aaPredicted RBP6.07□□□□□ -1.44
NR1I3-228ENST00000511676 A6NDN8 102 aa6.07□□□□□ -1.44
NR1I3-228ENST00000511676 KIAA0087Q14695 138 aa6.07□□□□□ -1.44
NR1I3-228ENST00000511676 CEND1Q8N111 149 aa6.07□□□□□ -1.44
NR1I3-228ENST00000511676 ORAOV1Q8WV07 137 aa6.07□□□□□ -1.44
NR1I3-228ENST00000511676 C2orf48Q96LS8 159 aa6.07□□□□□ -1.44
NR1I3-228ENST00000511676 LITAFQ99732 161 aa6.07□□□□□ -1.44
NR1I3-228ENST00000511676 FRAS1Q86XX4 4008 aa6.06□□□□□ -1.44
NR1I3-228ENST00000511676 A0A1B0GVY2 172 aa6.06□□□□□ -1.44
NR1I3-228ENST00000511676 C16orf90A8MZG2 172 aa6.06□□□□□ -1.44
NR1I3-228ENST00000511676 H3BS24 57 aa6.06□□□□□ -1.44
NR1I3-228ENST00000511676 CKS1BP61024 79 aa6.06□□□□□ -1.44
NR1I3-228ENST00000511676 SPAG11BQ08648 103 aa6.06□□□□□ -1.44
NR1I3-228ENST00000511676 SRSF9Q13242 221 aaKnown RBP eCLIP6.06□□□□□ -1.44
NR1I3-228ENST00000511676 COL5A1-AS1Q5SY13 56 aa6.06□□□□□ -1.44
NR1I3-228ENST00000511676 Q6ZR54 194 aa6.06□□□□□ -1.44
NR1I3-228ENST00000511676 C6orf223Q8N319 242 aa6.06□□□□□ -1.44
NR1I3-228ENST00000511676 IGKV2D-24A0A075B6R9 120 aa6.05□□□□□ -1.44
NR1I3-228ENST00000511676 A0A1B0GWB2 263 aa6.05□□□□□ -1.44
NR1I3-228ENST00000511676 RTL8CO15255 209 aa6.05□□□□□ -1.44
NR1I3-228ENST00000511676 HINT1P49773 126 aaPredicted RBP6.05□□□□□ -1.44
NR1I3-228ENST00000511676 RPL24P83731 157 aaKnown RBP6.05□□□□□ -1.44
NR1I3-228ENST00000511676 TOMM7Q9P0U1 55 aa6.05□□□□□ -1.44
NR1I3-228ENST00000511676 TRBV30A0A0K0K1B3 111 aa6.04□□□□□ -1.44
NR1I3-228ENST00000511676 NBDYA0A0U1RRE5 68 aa6.04□□□□□ -1.44
NR1I3-228ENST00000511676 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.03□□□□□ -1.44
NR1I3-228ENST00000511676 LOC107984156A0A0G2JMH3 177 aa6.03□□□□□ -1.44
NR1I3-228ENST00000511676 ZNF561-AS1K7EIQ3 104 aa6.03□□□□□ -1.44
NR1I3-228ENST00000511676 RNF151Q2KHN1 245 aa6.03□□□□□ -1.44
NR1I3-228ENST00000511676 MEIG1Q5JSS6 88 aa6.03□□□□□ -1.44
NR1I3-228ENST00000511676 ARL17AQ8IVW1 177 aa6.03□□□□□ -1.44
NR1I3-228ENST00000511676 C15orf56Q8N910 161 aa6.03□□□□□ -1.44
NR1I3-228ENST00000511676 NTN5Q8WTR8 489 aaPredicted RBP6.03□□□□□ -1.44
NR1I3-228ENST00000511676 ERG28Q9UKR5 140 aa6.03□□□□□ -1.44
NR1I3-228ENST00000511676 C14orf177Q52M58 125 aa6.02□□□□□ -1.45
NR1I3-228ENST00000511676 Q9HAA7 133 aa6.02□□□□□ -1.45
NR1I3-228ENST00000511676 A0A0B4J2C4 111 aa6.01□□□□□ -1.45
NR1I3-228ENST00000511676 FXYD2P54710 66 aa6.01□□□□□ -1.45
NR1I3-228ENST00000511676 LINC00308Q8TCZ7 52 aa6.01□□□□□ -1.45
NR1I3-228ENST00000511676 BATFQ16520 125 aa6□□□□□ -1.45
NR1I3-228ENST00000511676 ADAMTSL4-AS1Q5T5F5 129 aa6□□□□□ -1.45
NR1I3-228ENST00000511676 KRTAP1-5Q9BYS1 174 aa6□□□□□ -1.45
NR1I3-228ENST00000511676 PKIGQ9Y2B9 76 aa6□□□□□ -1.45
NR1I3-228ENST00000511676 HECTD4Q9Y4D8 3996 aa6□□□□□ -1.45
NR1I3-228ENST00000511676 USP17L23D6RBM5 183 aa5.99□□□□□ -1.45
NR1I3-228ENST00000511676 SMIM13P0DJ93 91 aa5.99□□□□□ -1.45
NR1I3-228ENST00000511676 LINC00158P58513 81 aa5.99□□□□□ -1.45
NR1I3-228ENST00000511676 C2orf82Q6UX34 121 aa5.99□□□□□ -1.45
NR1I3-228ENST00000511676 MUSTN1Q8IVN3 82 aa5.99□□□□□ -1.45
NR1I3-228ENST00000511676 Q8N1X5 172 aa5.99□□□□□ -1.45
NR1I3-228ENST00000511676 MIR7-3HGQ8N6C7 128 aa5.99□□□□□ -1.45
NR1I3-228ENST00000511676 CAMK2N2Q96S95 79 aa5.99□□□□□ -1.45
NR1I3-228ENST00000511676 PSCAO43653 123 aa5.98□□□□□ -1.45
NR1I3-228ENST00000511676 NDUFC2O95298 119 aa5.98□□□□□ -1.45
NR1I3-228ENST00000511676 TLX1NBP0CAT3 122 aa5.98□□□□□ -1.45
NR1I3-228ENST00000511676 SYCNQ0VAF6 134 aa5.98□□□□□ -1.45
NR1I3-228ENST00000511676 NHP2Q9NX24 153 aaKnown RBP5.98□□□□□ -1.45
NR1I3-228ENST00000511676 A4D1N5 150 aa5.97□□□□□ -1.45
NR1I3-228ENST00000511676 CNBPP62633 177 aaKnown RBP5.97□□□□□ -1.45
NR1I3-228ENST00000511676 UNQ6190/PRO20217Q6UXQ8 127 aa5.97□□□□□ -1.45
NR1I3-228ENST00000511676 Q6ZRN7 208 aaPredicted RBP5.97□□□□□ -1.45
NR1I3-228ENST00000511676 NDUFC2-KCTD14E9PQ53 114 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms