RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 MEIG1Q5JSS6 88 aa10.2□□□□□ -0.78
SCLT1-209ENST00000511426 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.18□□□□□ -0.78
SCLT1-209ENST00000511426 SMIM13P0DJ93 91 aa10.18□□□□□ -0.78
SCLT1-209ENST00000511426 SPAG11BQ08648 103 aa10.18□□□□□ -0.78
SCLT1-209ENST00000511426 COX17Q14061 63 aa10.18□□□□□ -0.78
SCLT1-209ENST00000511426 IGKV2D-24A0A075B6R9 120 aa10.18□□□□□ -0.78
SCLT1-209ENST00000511426 TTC32Q5I0X7 151 aa10.18□□□□□ -0.78
SCLT1-209ENST00000511426 STAB2Q8WWQ8 2551 aa10.17□□□□□ -0.78
SCLT1-209ENST00000511426 ADAMTSL4-AS1Q5T5F5 129 aa10.16□□□□□ -0.78
SCLT1-209ENST00000511426 NHP2Q9NX24 153 aaKnown RBP10.16□□□□□ -0.78
SCLT1-209ENST00000511426 GVQW2A0A096LPI5 108 aaPredicted RBP10.15□□□□□ -0.78
SCLT1-209ENST00000511426 MUSTN1Q8IVN3 82 aa10.15□□□□□ -0.78
SCLT1-209ENST00000511426 C2orf48Q96LS8 159 aa10.15□□□□□ -0.78
SCLT1-209ENST00000511426 ERG28Q9UKR5 140 aa10.15□□□□□ -0.78
SCLT1-209ENST00000511426 COL7A1Q02388 2944 aa10.15□□□□□ -0.78
SCLT1-209ENST00000511426 TAX1BP3O14907 124 aa10.15□□□□□ -0.79
SCLT1-209ENST00000511426 MEGF8Q7Z7M0 2845 aa10.15□□□□□ -0.79
SCLT1-209ENST00000511426 A0A0B4J2C4 111 aa10.14□□□□□ -0.79
SCLT1-209ENST00000511426 ZNF561-AS1K7EIQ3 104 aa10.14□□□□□ -0.79
SCLT1-209ENST00000511426 LINC00308Q8TCZ7 52 aa10.13□□□□□ -0.79
SCLT1-209ENST00000511426 NTN5Q8WTR8 489 aaPredicted RBP10.13□□□□□ -0.79
SCLT1-209ENST00000511426 Q9HAA7 133 aa10.13□□□□□ -0.79
SCLT1-209ENST00000511426 A4D1N5 150 aa10.12□□□□□ -0.79
SCLT1-209ENST00000511426 WWC2-AS2Q96NR7 200 aa10.12□□□□□ -0.79
SCLT1-209ENST00000511426 TRBV30A0A0K0K1B3 111 aa10.12□□□□□ -0.79
SCLT1-209ENST00000511426 LINC00158P58513 81 aa10.12□□□□□ -0.79
SCLT1-209ENST00000511426 C9orf118A6NHY6 69 aa10.11□□□□□ -0.79
SCLT1-209ENST00000511426 C2orf82Q6UX34 121 aa10.11□□□□□ -0.79
SCLT1-209ENST00000511426 MIR7-3HGQ8N6C7 128 aa10.11□□□□□ -0.79
SCLT1-209ENST00000511426 C15orf56Q8N910 161 aa10.11□□□□□ -0.79
SCLT1-209ENST00000511426 LOC107984156A0A0G2JMH3 177 aa10.1□□□□□ -0.79
SCLT1-209ENST00000511426 CFC1BP0CG36 223 aa10.1□□□□□ -0.79
SCLT1-209ENST00000511426 CFC1P0CG37 223 aa10.1□□□□□ -0.79
SCLT1-209ENST00000511426 ARL17AQ8IVW1 177 aa10.1□□□□□ -0.79
SCLT1-209ENST00000511426 PRKDCP78527 4128 aaKnown RBP10.1□□□□□ -0.79
SCLT1-209ENST00000511426 A0A1B0GV90 55 aa10.09□□□□□ -0.79
SCLT1-209ENST00000511426 RAB37Q96AX2 223 aa10.09□□□□□ -0.79
SCLT1-209ENST00000511426 PRO1854Q9UHT4 67 aa10.09□□□□□ -0.79
SCLT1-209ENST00000511426 DAND5Q8N907 189 aa10.08□□□□□ -0.8
SCLT1-209ENST00000511426 CAMK2N2Q96S95 79 aa10.08□□□□□ -0.8
SCLT1-209ENST00000511426 NBDYA0A0U1RRE5 68 aa10.07□□□□□ -0.8
SCLT1-209ENST00000511426 K7ERJ3 54 aa10.07□□□□□ -0.8
SCLT1-209ENST00000511426 PFN2P35080 140 aa10.07□□□□□ -0.8
SCLT1-209ENST00000511426 DYNC2H1Q8NCM8 4307 aaKnown RBP10.07□□□□□ -0.8
SCLT1-209ENST00000511426 A0A0U1RRA0 63 aa10.06□□□□□ -0.8
SCLT1-209ENST00000511426 UNQ6190/PRO20217Q6UXQ8 127 aa10.06□□□□□ -0.8
SCLT1-209ENST00000511426 RNF151Q2KHN1 245 aa10.06□□□□□ -0.8
SCLT1-209ENST00000511426 SOSTDC1Q6X4U4 206 aa10.06□□□□□ -0.8
SCLT1-209ENST00000511426 C6orf223Q8N319 242 aa10.06□□□□□ -0.8
SCLT1-209ENST00000511426 HIGD2BQ4VC39 106 aa10.05□□□□□ -0.8
SCLT1-209ENST00000511426 LYRM7Q5U5X0 104 aa10.05□□□□□ -0.8
SCLT1-209ENST00000511426 KRTAP1-5Q9BYS1 174 aa10.05□□□□□ -0.8
SCLT1-209ENST00000511426 USP17L23D6RBM5 183 aa10.04□□□□□ -0.8
SCLT1-209ENST00000511426 H3BUT2 72 aa10.04□□□□□ -0.8
SCLT1-209ENST00000511426 NDUFC2O95298 119 aa10.04□□□□□ -0.8
SCLT1-209ENST00000511426 SND1-IT1Q9HBX3 110 aa10.04□□□□□ -0.8
SCLT1-209ENST00000511426 PGPEP1Q9NXJ5 209 aa10.04□□□□□ -0.8
SCLT1-209ENST00000511426 A0A1W2PPM0 123 aa10.03□□□□□ -0.8
SCLT1-209ENST00000511426 C3orf84H3BNL1 204 aa10.03□□□□□ -0.8
SCLT1-209ENST00000511426 NPC2P61916 151 aa10.03□□□□□ -0.8
SCLT1-209ENST00000511426 C14orf177Q52M58 125 aa10.03□□□□□ -0.8
SCLT1-209ENST00000511426 C10orf25Q5T742 122 aa10.03□□□□□ -0.8
SCLT1-209ENST00000511426 C6orf48Q9UBA6 75 aa10.03□□□□□ -0.8
SCLT1-209ENST00000511426 TRAV13-2A0A0B4J235 113 aa10.02□□□□□ -0.8
SCLT1-209ENST00000511426 FABP2P12104 132 aa10.02□□□□□ -0.8
SCLT1-209ENST00000511426 SYCNQ0VAF6 134 aa10.02□□□□□ -0.8
SCLT1-209ENST00000511426 PSCAO43653 123 aa10.02□□□□□ -0.81
SCLT1-209ENST00000511426 EIF4EBP3O60516 100 aaPredicted RBP10.02□□□□□ -0.81
SCLT1-209ENST00000511426 FBN3Q75N90 2809 aa10.01□□□□□ -0.81
SCLT1-209ENST00000511426 TSPAN13O95857 204 aa10.01□□□□□ -0.81
SCLT1-209ENST00000511426 Q6ZRU5 148 aa10.01□□□□□ -0.81
SCLT1-209ENST00000511426 LINC00526Q96FQ7 95 aa10.01□□□□□ -0.81
SCLT1-209ENST00000511426 NDUFC2-KCTD14E9PQ53 114 aa10□□□□□ -0.81
SCLT1-209ENST00000511426 TLX1NBP0CAT3 122 aa10□□□□□ -0.81
SCLT1-209ENST00000511426 VAMP3Q15836 100 aa10□□□□□ -0.81
SCLT1-209ENST00000511426 CARD19Q96LW7 228 aa10□□□□□ -0.81
SCLT1-209ENST00000511426 LCE2DQ5TA82 110 aaPredicted RBP9.99□□□□□ -0.81
SCLT1-209ENST00000511426 GTF2H5Q6ZYL4 71 aa9.99□□□□□ -0.81
SCLT1-209ENST00000511426 C9orf116Q5BN46 136 aaPredicted RBP9.99□□□□□ -0.81
SCLT1-209ENST00000511426 CASC10Q5T4H9 136 aa9.99□□□□□ -0.81
SCLT1-209ENST00000511426 RPL13AP40429 203 aaKnown RBP9.96□□□□□ -0.81
SCLT1-209ENST00000511426 Q1RN00 199 aa9.96□□□□□ -0.81
SCLT1-209ENST00000511426 TRBV20-1A0A075B6N2 111 aa9.96□□□□□ -0.82
SCLT1-209ENST00000511426 GAGE10A6NGK3 116 aa9.96□□□□□ -0.82
SCLT1-209ENST00000511426 COX6CP09669 75 aa9.96□□□□□ -0.82
SCLT1-209ENST00000511426 CNBPP62633 177 aaKnown RBP9.96□□□□□ -0.82
SCLT1-209ENST00000511426 UBE2V1Q13404 147 aa9.96□□□□□ -0.82
SCLT1-209ENST00000511426 Q6ZR54 194 aa9.96□□□□□ -0.82
SCLT1-209ENST00000511426 PKIGQ9Y2B9 76 aa9.96□□□□□ -0.82
SCLT1-209ENST00000511426 SPCS1Q9Y6A9 102 aa9.96□□□□□ -0.82
SCLT1-209ENST00000511426 DNAH7Q8WXX0 4024 aa9.95□□□□□ -0.82
SCLT1-209ENST00000511426 IGKV2-28A0A075B6P5 120 aa9.95□□□□□ -0.82
SCLT1-209ENST00000511426 K7EP34 96 aa9.95□□□□□ -0.82
SCLT1-209ENST00000511426 IGKV2D-28P01615 120 aa9.95□□□□□ -0.82
SCLT1-209ENST00000511426 Q6ZRN7 208 aaPredicted RBP9.95□□□□□ -0.82
SCLT1-209ENST00000511426 TRBV10-2A0A0K0K1G8 114 aa9.94□□□□□ -0.82
SCLT1-209ENST00000511426 PSMB2P49721 201 aa9.93□□□□□ -0.82
SCLT1-209ENST00000511426 LINC00476Q8WZB0 136 aa9.93□□□□□ -0.82
SCLT1-209ENST00000511426 NAA38Q9BRA0 125 aaKnown RBP9.93□□□□□ -0.82
SCLT1-209ENST00000511426 CSMD3Q7Z407 3707 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms