RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 TLX1NBP0CAT3 122 aa3.54□□□□□ -1.84
CLCN3-207ENST00000511092 TMEM241Q24JQ0 296 aa3.54□□□□□ -1.84
CLCN3-207ENST00000511092 PAPPA-AS1Q5QFB9 102 aa3.54□□□□□ -1.84
CLCN3-207ENST00000511092 SMIM29Q86T20 159 aa3.54□□□□□ -1.84
CLCN3-207ENST00000511092 AMN1Q8IY45 258 aa3.54□□□□□ -1.84
CLCN3-207ENST00000511092 OR10D4PQ8NGN7 298 aa3.54□□□□□ -1.84
CLCN3-207ENST00000511092 KIR2DL4Q99706 377 aa3.54□□□□□ -1.84
CLCN3-207ENST00000511092 TIMM21Q9BVV7 248 aa3.54□□□□□ -1.84
CLCN3-207ENST00000511092 IGHV3OR16-9A0A0B4J2B5 98 aa3.53□□□□□ -1.84
CLCN3-207ENST00000511092 NDUFA1O15239 70 aa3.53□□□□□ -1.84
CLCN3-207ENST00000511092 GAGE2EQ4V326 116 aa3.53□□□□□ -1.84
CLCN3-207ENST00000511092 UNQ6190/PRO20217Q6UXQ8 127 aa3.53□□□□□ -1.84
CLCN3-207ENST00000511092 Q6ZUT4 128 aa3.53□□□□□ -1.84
CLCN3-207ENST00000511092 KRTAP7-1Q8IUC3 87 aa3.53□□□□□ -1.84
CLCN3-207ENST00000511092 ORAOV1Q8WV07 137 aa3.53□□□□□ -1.84
CLCN3-207ENST00000511092 FAM104AQ969W3 186 aa3.53□□□□□ -1.84
CLCN3-207ENST00000511092 C6orf48Q9UBA6 75 aa3.53□□□□□ -1.84
CLCN3-207ENST00000511092 GAGE2DQ9UEU5 116 aa3.53□□□□□ -1.84
CLCN3-207ENST00000511092 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
CLCN3-207ENST00000511092 PPP1R2P9O14990 202 aa3.52□□□□□ -1.85
CLCN3-207ENST00000511092 RPL13AP40429 203 aaKnown RBP3.52□□□□□ -1.85
CLCN3-207ENST00000511092 UBE2D1P51668 147 aa3.52□□□□□ -1.85
CLCN3-207ENST00000511092 IFITM2Q01629 132 aa3.52□□□□□ -1.85
CLCN3-207ENST00000511092 RIGQ13278 110 aa3.52□□□□□ -1.85
CLCN3-207ENST00000511092 FAM19A5Q7Z5A7 132 aaPredicted RBP3.52□□□□□ -1.85
CLCN3-207ENST00000511092 LINC01551Q86U37 167 aa3.52□□□□□ -1.85
CLCN3-207ENST00000511092 COMMD7Q86VX2 200 aa3.52□□□□□ -1.85
CLCN3-207ENST00000511092 SMDT1Q9H4I9 107 aa3.52□□□□□ -1.85
CLCN3-207ENST00000511092 OSTCQ9NRP0 149 aa3.52□□□□□ -1.85
CLCN3-207ENST00000511092 CARHSP1Q9Y2V2 147 aaKnown RBP3.52□□□□□ -1.85
CLCN3-207ENST00000511092 TRBV24-1A0A075B6N3 115 aa3.51□□□□□ -1.85
CLCN3-207ENST00000511092 LINC00862A6NCI5 91 aa3.51□□□□□ -1.85
CLCN3-207ENST00000511092 M0QXV9 152 aa3.51□□□□□ -1.85
CLCN3-207ENST00000511092 CEBPGP53567 150 aa3.51□□□□□ -1.85
CLCN3-207ENST00000511092 RPL39P62891 51 aaKnown RBP3.51□□□□□ -1.85
CLCN3-207ENST00000511092 RPL32P62910 135 aaKnown RBP3.51□□□□□ -1.85
CLCN3-207ENST00000511092 UBE2BP63146 152 aa3.51□□□□□ -1.85
CLCN3-207ENST00000511092 KIAA0087Q14695 138 aa3.51□□□□□ -1.85
CLCN3-207ENST00000511092 MRPL51Q4U2R6 128 aaKnown RBP3.51□□□□□ -1.85
CLCN3-207ENST00000511092 CLLU1Q5K131 121 aa3.51□□□□□ -1.85
CLCN3-207ENST00000511092 FAM104BQ5XKR9 115 aa3.51□□□□□ -1.85
CLCN3-207ENST00000511092 ALKAL2Q6UX46 152 aa3.51□□□□□ -1.85
CLCN3-207ENST00000511092 C20orf78Q9BR46 151 aa3.51□□□□□ -1.85
CLCN3-207ENST00000511092 LINC00846Q9NV44 126 aa3.51□□□□□ -1.85
CLCN3-207ENST00000511092 TRBV30A0A0K0K1B3 111 aa3.5□□□□□ -1.85
CLCN3-207ENST00000511092 ZNF727A8MUV8 499 aa3.5□□□□□ -1.85
CLCN3-207ENST00000511092 TCAPO15273 167 aa3.5□□□□□ -1.85
CLCN3-207ENST00000511092 ZNF861PO60384 105 aa3.5□□□□□ -1.85
CLCN3-207ENST00000511092 HBBP68871 147 aa3.5□□□□□ -1.85
CLCN3-207ENST00000511092 MRPS36P82909 103 aaKnown RBP3.5□□□□□ -1.85
CLCN3-207ENST00000511092 PEA15Q15121 130 aa3.5□□□□□ -1.85
CLCN3-207ENST00000511092 C9orf129Q5T035 196 aaKnown RBP3.5□□□□□ -1.85
CLCN3-207ENST00000511092 SMIM7Q9BQ49 75 aa3.5□□□□□ -1.85
CLCN3-207ENST00000511092 SPANXA1Q9NS26 97 aa3.5□□□□□ -1.85
CLCN3-207ENST00000511092 NAT8BQ9UHF3 227 aa3.5□□□□□ -1.85
CLCN3-207ENST00000511092 V9GYV3 84 aa3.5□□□□□ -1.85
CLCN3-207ENST00000511092 TGIF2-C20orf24A0A0A6YYL0 155 aa3.49□□□□□ -1.85
CLCN3-207ENST00000511092 NDUFC2-KCTD14E9PQ53 114 aa3.49□□□□□ -1.85
CLCN3-207ENST00000511092 TSPAN13O95857 204 aa3.49□□□□□ -1.85
CLCN3-207ENST00000511092 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
CLCN3-207ENST00000511092 CKS2P33552 79 aa3.49□□□□□ -1.85
CLCN3-207ENST00000511092 ASB16-AS1Q495Z4 193 aa3.49□□□□□ -1.85
CLCN3-207ENST00000511092 LINC00242Q5T6M2 205 aa3.49□□□□□ -1.85
CLCN3-207ENST00000511092 EIF5A2Q9GZV4 153 aaKnown RBP3.49□□□□□ -1.85
CLCN3-207ENST00000511092 SMIM27A0A1W2PRY6 76 aa3.48□□□□□ -1.85
CLCN3-207ENST00000511092 D6R8Y8 96 aa3.48□□□□□ -1.85
CLCN3-207ENST00000511092 NUPR1O60356 82 aa3.48□□□□□ -1.85
CLCN3-207ENST00000511092 SRP19P09132 144 aaKnown RBP3.48□□□□□ -1.85
CLCN3-207ENST00000511092 SEC61BP60468 96 aaKnown RBP3.48□□□□□ -1.85
CLCN3-207ENST00000511092 FAM74A3Q4VXF1 159 aa3.48□□□□□ -1.85
CLCN3-207ENST00000511092 C2orf82Q6UX34 121 aa3.48□□□□□ -1.85
CLCN3-207ENST00000511092 PACRGQ96M98 296 aaPredicted RBP3.48□□□□□ -1.85
CLCN3-207ENST00000511092 RETNLBQ9BQ08 111 aa3.48□□□□□ -1.85
CLCN3-207ENST00000511092 SMIM2Q9BVW6 85 aa3.48□□□□□ -1.85
CLCN3-207ENST00000511092 A0A087X002 238 aa3.47□□□□□ -1.85
CLCN3-207ENST00000511092 A0A1B0GW15 77 aa3.47□□□□□ -1.85
CLCN3-207ENST00000511092 NPYP01303 97 aa3.47□□□□□ -1.85
CLCN3-207ENST00000511092 IFI27P40305 119 aaPredicted RBP3.47□□□□□ -1.85
CLCN3-207ENST00000511092 RPL23P62829 140 aaKnown RBP3.47□□□□□ -1.85
CLCN3-207ENST00000511092 TPRXLQ17RH7 258 aa3.47□□□□□ -1.85
CLCN3-207ENST00000511092 UQCC3Q6UW78 93 aa3.47□□□□□ -1.85
CLCN3-207ENST00000511092 LINC01561Q8N1V8 128 aa3.47□□□□□ -1.85
CLCN3-207ENST00000511092 PYGO1Q9Y3Y4 419 aa3.47□□□□□ -1.85
CLCN3-207ENST00000511092 C22orf24Q9Y442 160 aa3.47□□□□□ -1.85
CLCN3-207ENST00000511092 IGLV4-3A0A075B6K6 122 aa3.46□□□□□ -1.86
CLCN3-207ENST00000511092 GAGE10A6NGK3 116 aa3.46□□□□□ -1.86
CLCN3-207ENST00000511092 F8W036 122 aa3.46□□□□□ -1.86
CLCN3-207ENST00000511092 CFC1P0CG37 223 aa3.46□□□□□ -1.86
CLCN3-207ENST00000511092 RAB5AP20339 215 aa3.46□□□□□ -1.86
CLCN3-207ENST00000511092 LBHQ53QV2 105 aaPredicted RBP3.46□□□□□ -1.86
CLCN3-207ENST00000511092 TMEM141Q96I45 108 aa3.46□□□□□ -1.86
CLCN3-207ENST00000511092 A0A1B0GXF2 115 aa3.45□□□□□ -1.86
CLCN3-207ENST00000511092 APOC3P02656 99 aa3.45□□□□□ -1.86
CLCN3-207ENST00000511092 PPBPP02775 128 aa3.45□□□□□ -1.86
CLCN3-207ENST00000511092 S100A8P05109 93 aa3.45□□□□□ -1.86
CLCN3-207ENST00000511092 RPL28P46779 137 aaKnown RBP3.45□□□□□ -1.86
CLCN3-207ENST00000511092 CKS1BP61024 79 aa3.45□□□□□ -1.86
CLCN3-207ENST00000511092 ADIRFQ15847 76 aa3.45□□□□□ -1.86
CLCN3-207ENST00000511092 C6orf226Q5I0X4 101 aa3.45□□□□□ -1.86
CLCN3-207ENST00000511092 Q6ZN92 141 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms