RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 IGLV1-51P01701 117 aa3.37□□□□□ -1.87
NUP54-210ENST00000510884 CRPP02741 224 aa3.37□□□□□ -1.87
NUP54-210ENST00000510884 BAALC-AS2P0C853 105 aa3.37□□□□□ -1.87
NUP54-210ENST00000510884 ZNF833PQ6ZTB9 187 aa3.37□□□□□ -1.87
NUP54-210ENST00000510884 FGF23Q9GZV9 251 aaPredicted RBP3.37□□□□□ -1.87
NUP54-210ENST00000510884 SNURFQ9Y675 71 aa3.37□□□□□ -1.87
NUP54-210ENST00000510884 SPENQ96T58 3664 aaKnown RBP3.37□□□□□ -1.87
NUP54-210ENST00000510884 ITPR2Q14571 2701 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 BOD1L1Q8NFC6 3051 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 IGLV1-50A0A075B6I6 118 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 TRBV6-6A0A0A6YYG2 114 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 PDE6HQ13956 83 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 NREPQ16612 68 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 LINC01590Q5TEZ4 76 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 Q8IYB0 196 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 Q9BRP9 147 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 ATMQ13315 3056 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 LCTP09848 1927 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 PDZD2O15018 2839 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 NOTCH1P46531 2555 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 PCDH15Q96QU1 1955 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 PTPRQQ9UMZ3 2332 aa3.36□□□□□ -1.87
NUP54-210ENST00000510884 ADGRG4Q8IZF6 3080 aa3.35□□□□□ -1.87
NUP54-210ENST00000510884 MYO16Q9Y6X6 1858 aa3.35□□□□□ -1.87
NUP54-210ENST00000510884 TANC2Q9HCD6 1990 aa3.35□□□□□ -1.87
NUP54-210ENST00000510884 FXYD4P59646 89 aa3.35□□□□□ -1.87
NUP54-210ENST00000510884 ROMO1P60602 79 aa3.35□□□□□ -1.87
NUP54-210ENST00000510884 MOBPQ13875 183 aa3.35□□□□□ -1.87
NUP54-210ENST00000510884 LINC00846Q9NV44 126 aa3.35□□□□□ -1.87
NUP54-210ENST00000510884 C22orf24Q9Y442 160 aa3.35□□□□□ -1.87
NUP54-210ENST00000510884 ATG2BQ96BY7 2078 aa3.35□□□□□ -1.87
NUP54-210ENST00000510884 USP9YO00507 2555 aaPredicted RBP3.35□□□□□ -1.87
NUP54-210ENST00000510884 STAB1Q9NY15 2570 aa3.35□□□□□ -1.87
NUP54-210ENST00000510884 NBEAL2Q6ZNJ1 2754 aa3.34□□□□□ -1.87
NUP54-210ENST00000510884 IGHV7-4-1A0A0J9YVY3 117 aa3.34□□□□□ -1.87
NUP54-210ENST00000510884 H3BQ85 93 aa3.34□□□□□ -1.87
NUP54-210ENST00000510884 I3L3M4 83 aa3.34□□□□□ -1.87
NUP54-210ENST00000510884 NDUFA3O95167 84 aa3.34□□□□□ -1.87
NUP54-210ENST00000510884 IAPPP10997 89 aa3.34□□□□□ -1.87
NUP54-210ENST00000510884 PDE6GP18545 87 aa3.34□□□□□ -1.87
NUP54-210ENST00000510884 ZNF137PP52743 207 aa3.34□□□□□ -1.87
NUP54-210ENST00000510884 TFF3Q07654 80 aa3.34□□□□□ -1.87
NUP54-210ENST00000510884 C1orf64Q8NEQ6 169 aa3.34□□□□□ -1.87
NUP54-210ENST00000510884 AMELXQ99217 191 aa3.34□□□□□ -1.87
NUP54-210ENST00000510884 CHCHD7Q9BUK0 85 aa3.34□□□□□ -1.87
NUP54-210ENST00000510884 TTTY10Q9BZA0 68 aa3.34□□□□□ -1.87
NUP54-210ENST00000510884 LENEPQ9Y5L5 61 aa3.34□□□□□ -1.87
NUP54-210ENST00000510884 FN1P02751 2386 aaKnown RBP3.34□□□□□ -1.87
NUP54-210ENST00000510884 JMJD1CQ15652 2540 aa3.34□□□□□ -1.88
NUP54-210ENST00000510884 CELSR1Q9NYQ6 3014 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 TRAV12-3A0A0B4J271 114 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 IGHV5-10-1A0A0J9YXX1 117 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 IGIPA6NJ69 53 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 H7C2G1 150 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 LY6HO94772 140 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 CD24P25063 80 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 EGFEM1PQ0D2K5 195 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 ENHOQ6UWT2 76 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 C2orf66Q6UXQ4 117 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 CAMK2N1Q7Z7J9 78 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 C20orf203Q8NBC4 194 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 NPBQ8NG41 125 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 PRR15LQ9BU68 103 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 NDUFA4L2Q9NRX3 87 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 S4R3C0 116 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 MYO9BQ13459 2157 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 ARID1AO14497 2285 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 NIPBLQ6KC79 2804 aaeCLIP3.33□□□□□ -1.88
NUP54-210ENST00000510884 CRYBG3Q68DQ2 2970 aa3.33□□□□□ -1.88
NUP54-210ENST00000510884 IGHV3-49A0A0A0MS15 119 aa3.32□□□□□ -1.88
NUP54-210ENST00000510884 CXorf51AA0A1B0GTR3 108 aa3.32□□□□□ -1.88
NUP54-210ENST00000510884 PINLYPA6NC86 204 aa3.32□□□□□ -1.88
NUP54-210ENST00000510884 H0YGX0 51 aa3.32□□□□□ -1.88
NUP54-210ENST00000510884 M0R1W7 72 aa3.32□□□□□ -1.88
NUP54-210ENST00000510884 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
NUP54-210ENST00000510884 C1orf134Q5TEV5 83 aa3.32□□□□□ -1.88
NUP54-210ENST00000510884 C10orf113Q5VZT2 155 aa3.32□□□□□ -1.88
NUP54-210ENST00000510884 LYPD2Q6UXB3 125 aa3.32□□□□□ -1.88
NUP54-210ENST00000510884 Q86TA4 180 aa3.32□□□□□ -1.88
NUP54-210ENST00000510884 MUC7Q8TAX7 377 aa3.32□□□□□ -1.88
NUP54-210ENST00000510884 C8orf17Q9NRJ1 99 aa3.32□□□□□ -1.88
NUP54-210ENST00000510884 ORMDL1Q9P0S3 153 aa3.32□□□□□ -1.88
NUP54-210ENST00000510884 PKD1L1Q8TDX9 2849 aa3.31□□□□□ -1.88
NUP54-210ENST00000510884 LRRK1Q38SD2 2015 aa3.31□□□□□ -1.88
NUP54-210ENST00000510884 A0A087WSZ3 146 aa3.31□□□□□ -1.88
NUP54-210ENST00000510884 TRBV6-5A0A0K0K1A5 114 aa3.31□□□□□ -1.88
NUP54-210ENST00000510884 KRTAP4-16G5E9R7 235 aaPredicted RBP3.31□□□□□ -1.88
NUP54-210ENST00000510884 C9orf129Q5T035 196 aaKnown RBP3.31□□□□□ -1.88
NUP54-210ENST00000510884 LINC01006Q8NI28 216 aa3.31□□□□□ -1.88
NUP54-210ENST00000510884 MRPL36Q9P0J6 103 aaKnown RBP3.31□□□□□ -1.88
NUP54-210ENST00000510884 CCDC168Q8NDH2 2452 aa3.31□□□□□ -1.88
NUP54-210ENST00000510884 MGAQ8IWI9 3026 aa3.3□□□□□ -1.88
NUP54-210ENST00000510884 MYO7AQ13402 2215 aa3.3□□□□□ -1.88
NUP54-210ENST00000510884 IGLV8-61A0A075B6I0 122 aa3.3□□□□□ -1.88
NUP54-210ENST00000510884 IGHV3-73A0A0B4J1V6 119 aa3.3□□□□□ -1.88
NUP54-210ENST00000510884 IGHV3-23P01764 117 aa3.3□□□□□ -1.88
NUP54-210ENST00000510884 PRB4P10163 310 aaPredicted RBP3.3□□□□□ -1.88
NUP54-210ENST00000510884 SPANXA2-OT1Q8N9U9 137 aa3.3□□□□□ -1.88
NUP54-210ENST00000510884 Q8NDZ9 215 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms