RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, humanhuman

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-208ENST00000509620 NEXMIFQ5QGS0 1516 aa0.86□□□□□ -2.27
OTUD4-208ENST00000509620 KCPQ6ZWJ8 1503 aa0.86□□□□□ -2.27
OTUD4-208ENST00000509620 MYMXA0A1B0GTQ4 84 aa0.86□□□□□ -2.27
OTUD4-208ENST00000509620 LINC00959A0A1B0GUT2 108 aa0.86□□□□□ -2.27
OTUD4-208ENST00000509620 PLGLAQ15195 96 aa0.86□□□□□ -2.27
OTUD4-208ENST00000509620 Q8IZM0 81 aa0.86□□□□□ -2.27
OTUD4-208ENST00000509620 AHCTF1Q8WYP5 2266 aa0.85□□□□□ -2.27
OTUD4-208ENST00000509620 FXYD6-FXYD2A0A087WZ82 144 aa0.85□□□□□ -2.27
OTUD4-208ENST00000509620 I3L2K1 104 aa0.85□□□□□ -2.27
OTUD4-208ENST00000509620 IGLC3P0DOY3 106 aa0.85□□□□□ -2.27
OTUD4-208ENST00000509620 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
OTUD4-208ENST00000509620 UBE2D4Q9Y2X8 147 aa0.85□□□□□ -2.27
OTUD4-208ENST00000509620 PPLO60437 1756 aa0.85□□□□□ -2.27
OTUD4-208ENST00000509620 LAMC1P11047 1609 aa0.85□□□□□ -2.27
OTUD4-208ENST00000509620 ARHGAP35Q9NRY4 1499 aa0.85□□□□□ -2.27
OTUD4-208ENST00000509620 NOTCH1P46531 2555 aa0.85□□□□□ -2.27
OTUD4-208ENST00000509620 IGLC2P0DOY2 106 aa0.84□□□□□ -2.27
OTUD4-208ENST00000509620 SPINK6Q6UWN8 80 aa0.84□□□□□ -2.27
OTUD4-208ENST00000509620 MYO3AQ8NEV4 1616 aa0.84□□□□□ -2.28
OTUD4-208ENST00000509620 FBN2P35556 2912 aa0.84□□□□□ -2.28
OTUD4-208ENST00000509620 XRN1Q8IZH2 1706 aaKnown RBP0.84□□□□□ -2.28
OTUD4-208ENST00000509620 ZNF469Q96JG9 3925 aaPredicted RBP0.83□□□□□ -2.28
OTUD4-208ENST00000509620 SETBP1Q9Y6X0 1596 aa0.83□□□□□ -2.28
OTUD4-208ENST00000509620 KRTAP19-3Q7Z4W3 81 aa0.83□□□□□ -2.28
OTUD4-208ENST00000509620 SHPRHQ149N8 1683 aa0.82□□□□□ -2.28
OTUD4-208ENST00000509620 A0A0G2JMZ2 1700 aa0.82□□□□□ -2.28
OTUD4-208ENST00000509620 SUPT6HQ7KZ85 1726 aaKnown RBP0.82□□□□□ -2.28
OTUD4-208ENST00000509620 A0A1B0GUT8 65 aa0.82□□□□□ -2.28
OTUD4-208ENST00000509620 CEBPZOSA8MTT3 80 aa0.82□□□□□ -2.28
OTUD4-208ENST00000509620 KIF14Q15058 1648 aa0.82□□□□□ -2.28
OTUD4-208ENST00000509620 GOLGA4Q13439 2230 aaKnown RBP0.81□□□□□ -2.28
OTUD4-208ENST00000509620 DEFB112Q30KQ8 113 aa0.81□□□□□ -2.28
OTUD4-208ENST00000509620 DEFB123Q8N688 67 aa0.81□□□□□ -2.28
OTUD4-208ENST00000509620 USMG5Q96IX5 58 aa0.81□□□□□ -2.28
OTUD4-208ENST00000509620 FAM208BQ5VWN6 2430 aa0.81□□□□□ -2.28
OTUD4-208ENST00000509620 TARBP1Q13395 1621 aaKnown RBP0.81□□□□□ -2.28
OTUD4-208ENST00000509620 CRYBG1Q9Y4K1 1723 aa0.81□□□□□ -2.28
OTUD4-208ENST00000509620 MAGI2Q86UL8 1455 aa0.8□□□□□ -2.28
OTUD4-208ENST00000509620 TULP4Q9NRJ4 1543 aa0.8□□□□□ -2.28
OTUD4-208ENST00000509620 PAPPAQ13219 1627 aa0.8□□□□□ -2.28
OTUD4-208ENST00000509620 C5P01031 1676 aa0.8□□□□□ -2.28
OTUD4-208ENST00000509620 UBR1Q8IWV7 1749 aa0.8□□□□□ -2.28
OTUD4-208ENST00000509620 PAPPA2Q9BXP8 1791 aa0.8□□□□□ -2.28
OTUD4-208ENST00000509620 H3BUT2 72 aa0.79□□□□□ -2.28
OTUD4-208ENST00000509620 CRIPTQ9P021 101 aa0.79□□□□□ -2.28
OTUD4-208ENST00000509620 ANKRD36A6QL64 1941 aa0.79□□□□□ -2.28
OTUD4-208ENST00000509620 ERVK-7P63135 1459 aa0.79□□□□□ -2.28
OTUD4-208ENST00000509620 SAMD9Q5K651 1589 aa0.79□□□□□ -2.28
OTUD4-208ENST00000509620 MAP3K4Q9Y6R4 1608 aa0.78□□□□□ -2.28
OTUD4-208ENST00000509620 CCDC141Q6ZP82 1450 aa0.78□□□□□ -2.28
OTUD4-208ENST00000509620 CFDP00746 253 aaPredicted RBP0.77□□□□□ -2.29
OTUD4-208ENST00000509620 COX6B1P14854 86 aa0.77□□□□□ -2.29
OTUD4-208ENST00000509620 BVES-AS1Q5T3Y7 98 aa0.77□□□□□ -2.29
OTUD4-208ENST00000509620 CACNA1HO95180 2353 aa0.77□□□□□ -2.29
OTUD4-208ENST00000509620 NHSL1Q5SYE7 1610 aa0.76□□□□□ -2.29
OTUD4-208ENST00000509620 K7EQZ3 153 aa0.76□□□□□ -2.29
OTUD4-208ENST00000509620 COX8AP10176 69 aa0.76□□□□□ -2.29
OTUD4-208ENST00000509620 APCP25054 2843 aa0.75□□□□□ -2.29
OTUD4-208ENST00000509620 ATP7BP35670 1465 aa0.75□□□□□ -2.29
OTUD4-208ENST00000509620 PLCE1Q9P212 2302 aa0.75□□□□□ -2.29
OTUD4-208ENST00000509620 PRH1P02810 166 aa0.75□□□□□ -2.29
OTUD4-208ENST00000509620 Q5BKY6 102 aa0.75□□□□□ -2.29
OTUD4-208ENST00000509620 GAFA1Q96PS6 74 aa0.75□□□□□ -2.29
OTUD4-208ENST00000509620 BIVM-ERCC5R4GMW8 1640 aa0.75□□□□□ -2.29
OTUD4-208ENST00000509620 LRRC9Q6ZRR7 1453 aa0.74□□□□□ -2.29
OTUD4-208ENST00000509620 KIF20BQ96Q89 1820 aa0.74□□□□□ -2.29
OTUD4-208ENST00000509620 SPTY2D1-AS1A0A0U1RR47 76 aa0.74□□□□□ -2.29
OTUD4-208ENST00000509620 I3L3M4 83 aa0.74□□□□□ -2.29
OTUD4-208ENST00000509620 NDUFB1O75438 58 aa0.74□□□□□ -2.29
OTUD4-208ENST00000509620 TNCP24821 2201 aa0.74□□□□□ -2.29
OTUD4-208ENST00000509620 KIAA0556O60303 1618 aa0.74□□□□□ -2.29
OTUD4-208ENST00000509620 TTC28Q96AY4 2481 aa0.74□□□□□ -2.29
OTUD4-208ENST00000509620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.74□□□□□ -2.29
OTUD4-208ENST00000509620 KDM5DQ9BY66 1539 aa0.74□□□□□ -2.29
OTUD4-208ENST00000509620 DCAF1Q9Y4B6 1507 aa0.74□□□□□ -2.29
OTUD4-208ENST00000509620 TRAV21A0A0B4J279 112 aa0.73□□□□□ -2.29
OTUD4-208ENST00000509620 SPINK1P00995 79 aa0.73□□□□□ -2.29
OTUD4-208ENST00000509620 SLIT1O75093 1534 aa0.73□□□□□ -2.29
OTUD4-208ENST00000509620 LRRC37AA6NMS7 1700 aa0.72□□□□□ -2.29
OTUD4-208ENST00000509620 PKD1L3Q7Z443 1732 aa0.72□□□□□ -2.29
OTUD4-208ENST00000509620 UBR3Q6ZT12 1888 aa0.72□□□□□ -2.29
OTUD4-208ENST00000509620 CPSF4LA6NMK7 179 aaKnown RBP0.72□□□□□ -2.29
OTUD4-208ENST00000509620 KRTAP2-3P0C7H8 128 aa0.72□□□□□ -2.29
OTUD4-208ENST00000509620 COX7BP24311 80 aa0.72□□□□□ -2.29
OTUD4-208ENST00000509620 DEFB121Q5J5C9 76 aa0.72□□□□□ -2.29
OTUD4-208ENST00000509620 Q5VSD8 79 aa0.72□□□□□ -2.29
OTUD4-208ENST00000509620 WFDC9Q8NEX5 89 aa0.72□□□□□ -2.29
OTUD4-208ENST00000509620 C18orf32Q8TCD1 76 aa0.72□□□□□ -2.29
OTUD4-208ENST00000509620 SMR3AQ99954 134 aa0.72□□□□□ -2.29
OTUD4-208ENST00000509620 KRTAP2-4Q9BYR9 128 aa0.72□□□□□ -2.29
OTUD4-208ENST00000509620 KRTAP2-1Q9BYU5 128 aa0.72□□□□□ -2.29
OTUD4-208ENST00000509620 USF3Q68DE3 2245 aa0.72□□□□□ -2.29
OTUD4-208ENST00000509620 RRBP1Q9P2E9 1410 aaKnown RBP0.72□□□□□ -2.29
OTUD4-208ENST00000509620 CELSR2Q9HCU4 2923 aa0.71□□□□□ -2.29
OTUD4-208ENST00000509620 ZFHX3Q15911 3703 aa0.71□□□□□ -2.3
OTUD4-208ENST00000509620 DOPEY2Q9Y3R5 2298 aa0.71□□□□□ -2.3
OTUD4-208ENST00000509620 TENM3Q9P273 2699 aa0.71□□□□□ -2.3
OTUD4-208ENST00000509620 A0A087WXM4 84 aa0.71□□□□□ -2.3
OTUD4-208ENST00000509620 SPRR1BP22528 89 aa0.71□□□□□ -2.3
OTUD4-208ENST00000509620 DIP2BQ9P265 1576 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms